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ASPNIDRAFT_56726-T1, ASPNIDRAFT_56726-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_56726-T1
Unique NameASPNIDRAFT_56726-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000006.1:309053..310079-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_56726-T1 ID=ASPNIDRAFT_56726-T1|Name=ASPNIDRAFT_56726-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1027bp|location=Sequence derived from alignment at ACJE01000006.1:309053..310079- (Aspergillus niger ATCC 1015)
CATTTCTCAGTAGTATCCGCGCACGTCTCTGGATTTACGAATCAGGGTCC
ACCAGTCGAAACTTCGAACTACTCTCATTATACAATCCTCTTTCCATTCC
CGCATTAACCCCTCCATCAACACCATGTCCTCCAAGTCGCAATTGACCTA
CACTGCCCGTGCCAGCAAGCATCCCAATGCTCTGGCGAAGAGGCTGTTCG
AGATTGCCGAGGCCAAGAAGACCAATGTGACTGTCTCGGCTGACGTTACC
ACCACTAAGGAGCTACTAGATCTTGCTGACCGTAGGCCGACCCGCTACTC
TGCCTGATTATGCTGCATGCAAACTTATTAACGGTGATACCGGACTGCAG
GTCTCGGTCCCTACATTGCCGTGATCAAAACCCACATCGATATCCTCTCT
GATTTCAGCAACGAGACCATTGAGGGACTTAAGGCTCTCGCGCAGAAGCA
CAACTTTCTCATCTTCGAGGACCGCAAGTTCATTGACATCGGCAACACGG
TCCAGAAGCAATACCACGGCGGTACCCTCCGTATCTCGGAATGGGCCCAC
ATCATCAACTGCAGCATTCTCCCTGGTGAGGGTATCGTCGAGGCTCTCGC
TCAGACGGCGTCTGCACCGGACTTCGCCTACGGCCCCGAACGCGGTCTGT
TGATCTTGGCAGAGATGACCTCTAAGGGCTCCTTGGCTACCGGCCAGTAC
ACTACTTCCTCGGTCGATTATGCCCGGAAATACAAGAACTTCGTTATGGG
ATTCGTGTCGACGCGCGCGTTGGGTGAGGTGCAGTCGGAAGTCAGCTCTC
CTTCGGATGAGGAGGACTTTGTGGTCTTCACGACTGGTGTGAACATTTCT
TCCAAGGGAGATAAGCTTGGTCAGCAGTACCAGACGCCCGGATCGGCTAT
CGGCCGGGGTGCTGACTTCATTATCGCGGGTCGCGGTATCTACGCCGCGC
CGGATCCGGTGCAGGCTGCGCAACAGTATCAGAAGGAGGGGTGGGAAGCC
TACCTGGCCCGTGTCGGCGGAAACTAA
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Coding sequence (CDS) from alignment at ACJE01000006.1:309053..310079-

>ASPNIDRAFT_56726-T1 ID=ASPNIDRAFT_56726-T1|Name=ASPNIDRAFT_56726-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1668bp|location=Sequence derived from alignment at ACJE01000006.1:309053..310079- (Aspergillus niger ATCC 1015)
GTCTCGGTCCCTACATTGCCGTGATCAAAACCCACATCGATATCCTCTCT
GATTTCAGCAACGAGACCATTGAGGGACTTAAGGCTCTCGCGCAGAAGCA
CAACTTTCTCATCTTCGAGGACCGCAAGTTCATTGACATCGGCAACACGG
TCCAGAAGCAATACCACGGCGGTACCCTCCGTATCTCGGAATGGGCCCAC
ATCATCAACTGCAGCATTCTCCCTGGTGAGGGTATCGTCGAGGCTCTCGC
TCAGACGGCGTCTGCACCGGACTTCGCCTACGGCCCCGAACGCGGTCTGT
TGATCTTGGCAGAGATGACCTCTAAGGGCTCCTTGGCTACCGGCCAGTAC
ACTACTTCCTCGGTCGATTATGCCCGGAAATACAAGAACTTCGTTATGGG
ATTCGTGTCGACGCGCGCGTTGGGTGAGGTGCAGTCGGAAGTCAGCTCTC
CTTCGGATGAGGAGGACTTTGTGGTCTTCACGACTGGTGTGAACATTTCT
TCCAAGGGAGATAAGCTTGGTCAGCAGTACCAGACGCCCGGATCGGCTAT
CGGCCGGGGTGCTGACTTCATTATCGCGGGTCGCGGTATCTACGCCGCGC
CGGATCCGGTGCAGGCTGCGCAACAGTATCAGAAGGAGGGGTGGGAAGCC
TACCTGGCCCGTGTCGGCGGAAACTAAATGTCCTCCAAGTCGCAATTGAC
CTACACTGCCCGTGCCAGCAAGCATCCCAATGCTCTGGCGAAGAGGCTGT
TCGAGATTGCCGAGGCCAAGAAGACCAATGTGACTGTCTCGGCTGACGTT
ACCACCACTAAGGAGCTACTAGATCTTGCTGACCGTCTCGGTCCCTACAT
TGCCGTGATCAAAACCCACATCGATATCCTCTCTGATTTCAGCAACGAGA
CCATTGAGGGACTTAAGGCTCTCGCGCAGAAGCACAACTTTCTCATCTTC
GAGGACCGCAAGTTCATTGACATCGGCAACACGGTCCAGAAGCAATACCA
CGGCGGTACCCTCCGTATCTCGGAATGGGCCCACATCATCAACTGCAGCA
TTCTCCCTGGTGAGGGTATCGTCGAGGCTCTCGCTCAGACGGCGTCTGCA
CCGGACTTCGCCTACGGCCCCGAACGCGGTCTGTTGATCTTGGCAGAGAT
GACCTCTAAGGGCTCCTTGGCTACCGGCCAGTACACTACTTCCTCGGTCG
ATTATGCCCGGAAATACAAGAACTTCGTTATGGGATTCGTGTCGACGCGC
GCGTTGGGTGAGGTGCAGTCGGAAGTCAGCTCTCCTTCGGATGAGGAGGA
CTTTGTGGTCTTCACGACTGGTGTGAACATTTCTTCCAAGGGAGATAAGC
TTGGTCAGCAGTACCAGACGCCCGGATCGGCTATCGGCCGGGGTGCTGAC
TTCATTATCGCGGGTCGCGGTATCTACGCCGCGCCGGATCCGGTGCAGGC
TGCGCAACAGTATCAGAAGGAGGGGTGGGAAGCCTACCTGGCCCGTGTCG
GCGGAAACTAAATGTCCTCCAAGTCGCAATTGACCTACACTGCCCGTGCC
AGCAAGCATCCCAATGCTCTGGCGAAGAGGCTGTTCGAGATTGCCGAGGC
CAAGAAGACCAATGTGACTGTCTCGGCTGACGTTACCACCACTAAGGAGC
TACTAGATCTTGCTGACC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0004590orotidine-5'-phosphate decarboxylase activity
Vocabulary: Biological Process
TermDefinition
GO:0044205'de novo' UMP biosynthetic process
GO:0006207'de novo' pyrimidine nucleobase biosynthetic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_56726ASPNIDRAFT_56726Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_56726-T1ASPNIDRAFT_56726-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_56726-T1.cdsASPNIDRAFT_56726-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_56726-T1.exon2ASPNIDRAFT_56726-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_56726-T1.exon1ASPNIDRAFT_56726-T1.exon1Aspergillus niger ATCC 1015exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_56726-T1.utr5p1ASPNIDRAFT_56726-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09263Q7N
DBxrefInterPro:IPR011060
DBxrefInterPro:IPR018089
DBxrefInterPro:IPR013785
DBxrefInterPro:IPR014732
DBxrefInterPro:IPR001754
DBxrefPFAM:PF00215
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000006.1supercontigACJE01000006.1:309053..310079 -
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