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ASPNIDRAFT_56745-T1, ASPNIDRAFT_56745-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_56745-T1
Unique NameASPNIDRAFT_56745-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000006.1:16856..18486-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_56745-T1 ID=ASPNIDRAFT_56745-T1|Name=ASPNIDRAFT_56745-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1631bp|location=Sequence derived from alignment at ACJE01000006.1:16856..18486- (Aspergillus niger ATCC 1015)
ATTCTTGCTTCACTCGCATCCACACCACCCATTGTTGATTTGCCTACACA
GTCCAGCATACAACCTTACAACCTCACTGGCTAACACACAATGTCTCGAC
CTGGTACTACGCTTTATGTCACCGGCTTCGGGCACGGGACACGAGCTCGC
GACCTTGCCTACGAATTCGAACGGTACGTGCCGCTCATCGATTGCTACGC
GCTACCATGACTATACGACCCGTGTCCATTCTCGCAATTCACCTCGGCTG
AGTCCCGCAAACCGACGTCGGTGCCGCTCTCTATATCATATTGTGATAGA
GATTTGCTTGTTTAATCCGATTTCCTTGGAGAGGGGACTCCTTGAAGGGG
GATCCTCCGAAAGAGATTTCCTCTCACAGTTGCCTTGCACCATATATTTA
ATGATTGAAATGCATGTGGATCGTCTTCTAACATTGACTTAGATATGGAC
GTCTTGTCCGCTGTGACATCCCAGCGCCACGTACCCCTTCCAGCAGACTG
TATGTTAAATCGAGGCTTCACACCCTAAATGTTACTTGCTCATGACATAA
GGTTTGCCTTTGTGGAGTACGAGAGCCGCCGTGACGCAGATGATGCATAC
CATGAAATGCATAACAAGCGAATTGGCCGCGATGATTTGTTGAAAATTGA
GGTAAGTAGAAGACTCGGATTTCATAACTTGACTGACATGGCCAAAGTGG
GCACGTACTCCTCCATCTGCTTCTTGGCGTTTCGATTCTGGTCGGGACCG
GCGACGTGACCGTACTCCGCCACGACGTGGCCGCTCTCCTTCCCCTAGAC
GTGGTCGTGGCGACTATTCTCCCCGAAGGGACGACAGGTACGACCGGGAT
TATGACCGACATGACCGCGACTATGACCGCCGCGATCGCGACTATGACCG
CCGTGACCGCGACTATGATCGCCGCGATCGGGACCGTGAACGTTCTCGTG
ACCGCTCTCGAAGCCCTGATGAGAGGGATCGCGATATCAAGGATGAAAGA
GAGCGCCGTGATGACGATCGTGAACGACGCGAGGACGAGCGGGAGAATAT
CCCAAACGGTGAAGACAGGAAAGGTTTGCTCTTTGATACATGTACCCACT
CCTAGTCGGTGCTGATCATCTGCCGCAGTCCCCTTAGAACCCTTGACCTC
AGCTCATGATGAGCTTGATACAGCCGAGTAGGTTATTTTGGCTTCATGAA
CTATCAGATCTCGTACCATGCACCCGGCCAAAGACGTCAATCTGTGCCGG
ATCGTATTCCAAGGCCTGAGAGATAGAACGTGAAGCTTAAGAAGTCATCA
GTGCACGTTGATGATCGACCTGGATGTTTATTTCGCTTTATCGCTGTTGA
ATACTGGCGCTATTGTCCTGACCCTCCCCTAAGCTCCCGTTCCCCTCTTC
AACCCCCATGCTTGTTCGCTCTTCTTTTTCATTCCATTGCTCTCTTGTCT
TGCTTCTTAATATTTCCATTTGCATTGATTCTTCCTCTGTGCTTTCCTTT
GCCATTTACTTCTAAATTGCAGTGTTCATTAGCAGAGAGAACGCGAAGGG
GCCAACTCCTGGAAGTGCTGGCGCAAGATACGAGGCATTGGGGCTTTGGT
ACTATTGCTTAACATTGGTATTTATCATGGT
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Coding sequence (CDS) from alignment at ACJE01000006.1:16856..18486-

>ASPNIDRAFT_56745-T1 ID=ASPNIDRAFT_56745-T1|Name=ASPNIDRAFT_56745-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=3345bp|location=Sequence derived from alignment at ACJE01000006.1:16856..18486- (Aspergillus niger ATCC 1015)
TCCCCTTAGAACCCTTGACCTCAGCTCATGATGAGCTTGATACAGCCGAG
TAGTGGGCACGTACTCCTCCATCTGCTTCTTGGCGTTTCGATTCTGGTCG
GGACCGGCGACGTGACCGTACTCCGCCACGACGTGGCCGCTCTCCTTCCC
CTAGACGTGGTCGTGGCGACTATTCTCCCCGAAGGGACGACAGGTACGAC
CGGGATTATGACCGACATGACCGCGACTATGACCGCCGCGATCGCGACTA
TGACCGCCGTGACCGCGACTATGATCGCCGCGATCGGGACCGTGAACGTT
CTCGTGACCGCTCTCGAAGCCCTGATGAGAGGGATCGCGATATCAAGGAT
GAAAGAGAGCGCCGTGATGACGATCGTGAACGACGCGAGGACGAGCGGGA
GAATATCCCAAACGGTGAAGACAGGAAAGGTTTGCCTTTGTGGAGTACGA
GAGCCGCCGTGACGCAGATGATGCATACCATGAAATGCATAACAAGCGAA
TTGGCCGCGATGATTTGTTGAAAATTGAGATATGGACGTCTTGTCCGCTG
TGACATCCCAGCGCCACGTACCCCTTCCAGCAGACTATGTCTCGACCTGG
TACTACGCTTTATGTCACCGGCTTCGGGCACGGGACACGAGCTCGCGACC
TTGCCTACGAATTCGAACGTCCCCTTAGAACCCTTGACCTCAGCTCATGA
TGAGCTTGATACAGCCGAGTAGTGGGCACGTACTCCTCCATCTGCTTCTT
GGCGTTTCGATTCTGGTCGGGACCGGCGACGTGACCGTACTCCGCCACGA
CGTGGCCGCTCTCCTTCCCCTAGACGTGGTCGTGGCGACTATTCTCCCCG
AAGGGACGACAGGTACGACCGGGATTATGACCGACATGACCGCGACTATG
ACCGCCGCGATCGCGACTATGACCGCCGTGACCGCGACTATGATCGCCGC
GATCGGGACCGTGAACGTTCTCGTGACCGCTCTCGAAGCCCTGATGAGAG
GGATCGCGATATCAAGGATGAAAGAGAGCGCCGTGATGACGATCGTGAAC
GACGCGAGGACGAGCGGGAGAATATCCCAAACGGTGAAGACAGGAAAGGT
TTGCCTTTGTGGAGTACGAGAGCCGCCGTGACGCAGATGATGCATACCAT
GAAATGCATAACAAGCGAATTGGCCGCGATGATTTGTTGAAAATTGAGAT
ATGGACGTCTTGTCCGCTGTGACATCCCAGCGCCACGTACCCCTTCCAGC
AGACTATGTCTCGACCTGGTACTACGCTTTATGTCACCGGCTTCGGGCAC
GGGACACGAGCTCGCGACCTTGCCTACGAATTCGAACGTCCCCTTAGAAC
CCTTGACCTCAGCTCATGATGAGCTTGATACAGCCGAGTAGTGGGCACGT
ACTCCTCCATCTGCTTCTTGGCGTTTCGATTCTGGTCGGGACCGGCGACG
TGACCGTACTCCGCCACGACGTGGCCGCTCTCCTTCCCCTAGACGTGGTC
GTGGCGACTATTCTCCCCGAAGGGACGACAGGTACGACCGGGATTATGAC
CGACATGACCGCGACTATGACCGCCGCGATCGCGACTATGACCGCCGTGA
CCGCGACTATGATCGCCGCGATCGGGACCGTGAACGTTCTCGTGACCGCT
CTCGAAGCCCTGATGAGAGGGATCGCGATATCAAGGATGAAAGAGAGCGC
CGTGATGACGATCGTGAACGACGCGAGGACGAGCGGGAGAATATCCCAAA
CGGTGAAGACAGGAAAGGTTTGCCTTTGTGGAGTACGAGAGCCGCCGTGA
CGCAGATGATGCATACCATGAAATGCATAACAAGCGAATTGGCCGCGATG
ATTTGTTGAAAATTGAGATATGGACGTCTTGTCCGCTGTGACATCCCAGC
GCCACGTACCCCTTCCAGCAGACTATGTCTCGACCTGGTACTACGCTTTA
TGTCACCGGCTTCGGGCACGGGACACGAGCTCGCGACCTTGCCTACGAAT
TCGAACGTCCCCTTAGAACCCTTGACCTCAGCTCATGATGAGCTTGATAC
AGCCGAGTAGTGGGCACGTACTCCTCCATCTGCTTCTTGGCGTTTCGATT
CTGGTCGGGACCGGCGACGTGACCGTACTCCGCCACGACGTGGCCGCTCT
CCTTCCCCTAGACGTGGTCGTGGCGACTATTCTCCCCGAAGGGACGACAG
GTACGACCGGGATTATGACCGACATGACCGCGACTATGACCGCCGCGATC
GCGACTATGACCGCCGTGACCGCGACTATGATCGCCGCGATCGGGACCGT
GAACGTTCTCGTGACCGCTCTCGAAGCCCTGATGAGAGGGATCGCGATAT
CAAGGATGAAAGAGAGCGCCGTGATGACGATCGTGAACGACGCGAGGACG
AGCGGGAGAATATCCCAAACGGTGAAGACAGGAAAGGTTTGCCTTTGTGG
AGTACGAGAGCCGCCGTGACGCAGATGATGCATACCATGAAATGCATAAC
AAGCGAATTGGCCGCGATGATTTGTTGAAAATTGAGATATGGACGTCTTG
TCCGCTGTGACATCCCAGCGCCACGTACCCCTTCCAGCAGACTATGTCTC
GACCTGGTACTACGCTTTATGTCACCGGCTTCGGGCACGGGACACGAGCT
CGCGACCTTGCCTACGAATTCGAACGTCCCCTTAGAACCCTTGACCTCAG
CTCATGATGAGCTTGATACAGCCGAGTAGTGGGCACGTACTCCTCCATCT
GCTTCTTGGCGTTTCGATTCTGGTCGGGACCGGCGACGTGACCGTACTCC
GCCACGACGTGGCCGCTCTCCTTCCCCTAGACGTGGTCGTGGCGACTATT
CTCCCCGAAGGGACGACAGGTACGACCGGGATTATGACCGACATGACCGC
GACTATGACCGCCGCGATCGCGACTATGACCGCCGTGACCGCGACTATGA
TCGCCGCGATCGGGACCGTGAACGTTCTCGTGACCGCTCTCGAAGCCCTG
ATGAGAGGGATCGCGATATCAAGGATGAAAGAGAGCGCCGTGATGACGAT
CGTGAACGACGCGAGGACGAGCGGGAGAATATCCCAAACGGTGAAGACAG
GAAAGGTTTGCCTTTGTGGAGTACGAGAGCCGCCGTGACGCAGATGATGC
ATACCATGAAATGCATAACAAGCGAATTGGCCGCGATGATTTGTTGAAAA
TTGAGATATGGACGTCTTGTCCGCTGTGACATCCCAGCGCCACGTACCCC
TTCCAGCAGACTATGTCTCGACCTGGTACTACGCTTTATGTCACCGGCTT
CGGGCACGGGACACGAGCTCGCGACCTTGCCTACGAATTCGAACG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_56745ASPNIDRAFT_56745Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_56745-T1ASPNIDRAFT_56745-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_56745-T1.cdsASPNIDRAFT_56745-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_56745-T1.utr3p1ASPNIDRAFT_56745-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_56745-T1.exon5ASPNIDRAFT_56745-T1.exon5Aspergillus niger ATCC 1015exon
ASPNIDRAFT_56745-T1.exon4ASPNIDRAFT_56745-T1.exon4Aspergillus niger ATCC 1015exon
ASPNIDRAFT_56745-T1.exon3ASPNIDRAFT_56745-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_56745-T1.exon2ASPNIDRAFT_56745-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_56745-T1.exon1ASPNIDRAFT_56745-T1.exon1Aspergillus niger ATCC 1015exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_56745-T1.utr5p1ASPNIDRAFT_56745-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR035979
DBxrefInterPro:IPR034403
DBxrefInterPro:IPR012677
DBxrefInterPro:IPR000504
DBxrefPFAM:PF00076
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000006.1supercontigACJE01000006.1:16856..18486 -
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