You are here

Home

ASPNIDRAFT_56855-T1, ASPNIDRAFT_56855-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_56855-T1
Unique NameASPNIDRAFT_56855-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000020.1:1570271..1571226+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_56855-T1 ID=ASPNIDRAFT_56855-T1|Name=ASPNIDRAFT_56855-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=956bp|location=Sequence derived from alignment at ACJE01000020.1:1570271..1571226+ (Aspergillus niger ATCC 1015)
TGCTTATTTGACCGCCCGAAACACTTGGGGACTTGATCGCAAACATGTCA
CGTCCTGAAGATGTCTTGTAGGTGACCCTTGACGGATTACGAGGAAATCC
AGTGGCCAATATATCACTGACAAAGTGCAACAATTCAAGGCCTCCGGATC
TATTCTATGATGATAATGAGTCCCGAAAATATACTACCTCGTCTCGTATC
CGTAACATCCAGTCCGACATGACCCATCGGGCACTCGACCTCCTGGACCT
GAAATCACCTTCTTTGATACTTGATCTTGGCTGCGGCTCTGGTCTCTCCG
GCGAGATTCTCTCACAGGTGGCTCCCGAAGACGGAGGCCCGCATACTTGG
ATCGGCATGGACATCTCGCCTAGCATGCTCGATGTTGCCCTCCAGCGCGG
TGTCGATGGCGACCTCTTCCTTGCTGACATCGGGCAAGGAGTGCCGTTCC
GACCAGGAACCTTCGATGCAGCCATTAGTATCAGTGCTATCCAGTGGCTT
TGCAATGCGGAGTCTAGTGACGTTAGTCCGGAGTACCGTCTTCGTCGCTT
CTTTGAGGGCCTCTATGCTAGTCTGCGGCGCGGTGGTCGTGCAGTTTGCC
AGTTTTATCCAAAGAACGACGCTCAGCGGAGCATGATCAGTGGAGCTGCC
ATGAAGGCTGGCTTTGGAGCTGGTATACTGGAAGATGACCCGGGTACAAA
AAACAGCAAACTCTACCTCGTGCTCACCGTTGGAGGGGGTGGATTACAAG
GTGACATCACCGGTGTTGTCAATGGCATGAACGACGTGGATGTTGTGGAC
GCCCGGAAACGGGCTATGGAGCGTGGCAAACAAGCATCATCGAGAAAGGG
TGACAAGGCTTGGATTTTGCGAAAAAAGGAGCAGATGACTCGGAAAGGCA
AGGTTGTGAAGGCGAATTCAAAGTACACCGGCAGAAAACGACGTCCCGCT
TTTTGA
back to top

Coding sequence (CDS) from alignment at ACJE01000020.1:1570271..1571226+

>ASPNIDRAFT_56855-T1 ID=ASPNIDRAFT_56855-T1|Name=ASPNIDRAFT_56855-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1680bp|location=Sequence derived from alignment at ACJE01000020.1:1570271..1571226+ (Aspergillus niger ATCC 1015)
ATGTCACGTCCTGAAGATGTCTTGCCTCCGGATCTATTCTATGATGATAA
TGAGTCCCGAAAATATACTACCTCGTCTCGTATCCGTAACATCCAGTCCG
ACATGACCCATCGGGCACTCGACCTCCTGGACCTGAAATCACCTTCTTTG
ATACTTGATCTTGGCTGCGGCTCTGGTCTCTCCGGCGAGATTCTCTCACA
GGTGGCTCCCGAAGACGGAGGCCCGCATACTTGGATCGGCATGGACATCT
CGCCTAGCATGCTCGATGTTGCCCTCCAGCGCGGTGTCGATGGCGACCTC
TTCCTTGCTGACATCGGGCAAGGAGTGCCGTTCCGACCAGGAACCTTCGA
TGCAGCCATTAGTATCAGTGCTATCCAGTGGCTTTGCAATGCGGAGTCTA
GTGACGTTAGTCCGGAGTACCGTCTTCGTCGCTTCTTTGAGGGCCTCTAT
GCTAGTCTGCGGCGCGGTGGTCGTGCAGTTTGCCAGTTTTATCCAAAGAA
CGACGCTCAGCGGAGCATGATCAGTGGAGCTGCCATGAAGGCTGGCTTTG
GAGCTGGTATACTGGAAGATGACCCGGGTACAAAAAACAGCAAACTCTAC
CTCGTGCTCACCGTTGGAGGGGGTGGATTACAAGGTGACATCACCGGTGT
TGTCAATGGCATGAACGACGTGGATGTTGTGGACGCCCGGAAACGGGCTA
TGGAGCGTGGCAAACAAGCATCATCGAGAAAGGGTGACAAGGCTTGGATT
TTGCGAAAAAAGGAGCAGATGACTCGGAAAGGCAAGGTTGTGAAGGCGAA
TTCAAAGTACACCGGCAGAAAACGACGTCCCGCTTTTTGAATGTCACGTC
CTGAAGATGTCTTGCCTCCGGATCTATTCTATGATGATAATGAGTCCCGA
AAATATACTACCTCGTCTCGTATCCGTAACATCCAGTCCGACATGACCCA
TCGGGCACTCGACCTCCTGGACCTGAAATCACCTTCTTTGATACTTGATC
TTGGCTGCGGCTCTGGTCTCTCCGGCGAGATTCTCTCACAGGTGGCTCCC
GAAGACGGAGGCCCGCATACTTGGATCGGCATGGACATCTCGCCTAGCAT
GCTCGATGTTGCCCTCCAGCGCGGTGTCGATGGCGACCTCTTCCTTGCTG
ACATCGGGCAAGGAGTGCCGTTCCGACCAGGAACCTTCGATGCAGCCATT
AGTATCAGTGCTATCCAGTGGCTTTGCAATGCGGAGTCTAGTGACGTTAG
TCCGGAGTACCGTCTTCGTCGCTTCTTTGAGGGCCTCTATGCTAGTCTGC
GGCGCGGTGGTCGTGCAGTTTGCCAGTTTTATCCAAAGAACGACGCTCAG
CGGAGCATGATCAGTGGAGCTGCCATGAAGGCTGGCTTTGGAGCTGGTAT
ACTGGAAGATGACCCGGGTACAAAAAACAGCAAACTCTACCTCGTGCTCA
CCGTTGGAGGGGGTGGATTACAAGGTGACATCACCGGTGTTGTCAATGGC
ATGAACGACGTGGATGTTGTGGACGCCCGGAAACGGGCTATGGAGCGTGG
CAAACAAGCATCATCGAGAAAGGGTGACAAGGCTTGGATTTTGCGAAAAA
AGGAGCAGATGACTCGGAAAGGCAAGGTTGTGAAGGCGAATTCAAAGTAC
ACCGGCAGAAAACGACGTCCCGCTTTTTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0070476rRNA (guanine-N7)-methylation
Vocabulary: Molecular Function
TermDefinition
GO:0016435rRNA (guanine) methyltransferase activity
GO:0008168methyltransferase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_56855ASPNIDRAFT_56855Aspergillus niger ATCC 1015gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_56855-T1.utr5p1ASPNIDRAFT_56855-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_56855-T1.exon1ASPNIDRAFT_56855-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_56855-T1.exon2ASPNIDRAFT_56855-T1.exon2Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_56855-T1.cdsASPNIDRAFT_56855-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_56855-T1ASPNIDRAFT_56855-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteBUSCO:EOG092646EZ
DBxrefInterPro:IPR029063
DBxrefInterPro:IPR022238
DBxrefInterPro:IPR013216
DBxrefPFAM:PF12589
DBxrefPFAM:PF13649
DBxrefPFAM:PF08241
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000020.1supercontigACJE01000020.1:1570271..1571226 +
Powered by Drupal