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ASPNIDRAFT_56880-T1, ASPNIDRAFT_56880-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_56880-T1
Unique NameASPNIDRAFT_56880-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000001.1:1473890..1475844+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_56880-T1 ID=ASPNIDRAFT_56880-T1|Name=ASPNIDRAFT_56880-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1955bp|location=Sequence derived from alignment at ACJE01000001.1:1473890..1475844+ (Aspergillus niger ATCC 1015)
CACGATTTCTGGCAGCAAGTGACGCATATTTTAATCTGTACATGCTTTAA
TTTGATTTACCTCCTTTCGACAAGAACTCCCCCGCCATGGTCCTTCAGGA
TCTCGGGCGGCGAATCAACGCCGCCGTCAATGACCTGACTCGCTCTAACA
ATTTGGACGAGAAGGTGAGGATCAGCACTTTTCTCTCTGTCTGATGTATG
TACTGACTGTTAGCAGGCCTTTGATGACATGATCAAAGAGATCTGCGCCG
CCTTGCTGTCCGCCGACGTCAACGTCCGCCTGGTCCAGTCCCTCCGCAAA
TCCATCAAGTCCAGCGTCAACTTTGCCTCTCTTCCTCCCGCCGTGAACAA
GAAGCGTTTGATTCAGAAGGCCGTCTTCGATGAGCTGGTTTCCCTGGTTG
ATCCCCATGCGGAGCCATTCCGTCCCAAGAAGGGCCGCTCCAACGTGATC
ATGTTCGTCGGTCTACAGGGTGCCGGTAAAACCACCACCTGTACCAAGCT
GGCCCGCCACTATCAGATGCGCGGCTTCAAGACCGCCCTTGTCTGTGCCG
ATACCTTCCGAGCTGGTGCTTTCGACCAGCTGAAACAGAATGCCACCAAG
GCCAAGATCCCCTACTACGGTAGCCTGACGCAAACCGACCCCGCCATCGT
GGCAGCCGAGGGTGTGGCCAAGTTCAAGAAGGAGCGTTTCGAAATCATCA
TTGTCGATACCAGTGGTCGTCATAAGCAGGAAGAAGAGCTCTTCACCGAA
ATGACCCAGATTCAGACCGCCGTCACCCCCGACCAGACCATCCTCGTCCT
CGACAGCACCATCGGTCAGGCTGCCGAAGCCCAGTCCTCCGCCTTCAAGG
CCACCGCAGACTTCGGAGCCATCATCATCACCAAGACGGATGGTCACGCC
GCAGGTGGTGGTGCTATTTCCGCCGTCGCCGCCACACACACTCCCATTAT
CTACCTCGGTACCGGTGAGCACTTGATGGACCTGGAACGTTTCGAGCCCA
AGGCCTTCATCCAGAAGCTCCTGGGTATGGGTGATATGGCCGGACTGGTA
GAGCACGTACAAGCCGTGACCAAGGACTCGGCCTCCGCCAAGGAAACATA
CAAGCACATCTCAGAAGGTATCTACACGCTGCGCGACTTCCGCGAGAACA
TCACCTCCATCATGAAGATGGGTCCTCTCTCCAAGCTCTCCGGCATGATT
CCCGGTCTCTCCAACCTGACCGCGGGACTTGATGACGAAGACGGCTCCAT
GAAGCTCCGCCGCATGATCTACATTTTCGACAGCATGACGGCCGCCGAAC
TCGACGGCGACGGCAAGATGTTCGTCGAACAGCCTAGCCGCATGGTCCGG
ATCGCTTGCGGAAGCGGTACCACCGTCCGCGAAGTCGAAGACCTGCTCTC
CCAGCACCGCATGATGGCTGGTATGGCCAAGCGCGTCGGCGGACAGAAGA
AGCAGATGCAGCGTGCCCAGAACATGCTCAAGGGCGGTAACAAGGAACAG
CAGCTCGCCGCCATGCAGAAGCGCATGGCCGCCATGGGTGGTGCTGGCGG
TGGTGGATTCCCCGGTATGCCCGGCATGGGCGACATGGCCAAGATGATGC
AAATGCTGCAAGGTCAAGGAGGTGGCGGCGGTGGTGGTCTTCCCGGCCTG
GGTGGGATGGACCTACAAAGTATGATGAGCCAGATGAGTGGATTGATGGG
CGGTGGCGGTGGTGGTGGTGGCCGCGGTAGAGGACGGTGATTGTGATGAT
GACGATGATGCACGCATTCTGAAATTCCTTCTTGACTTTTGATTTCGCGT
TGTTACCATTCCATGATTATATTCTACACCTGTGCTCCGTCTCTTTTTTA
CGTTTGATTCTTAAGAGACTGGGATATATGGCCTTGCTTCAGTTCAGTCA
TCATTCACCTCATTCGTCGATTGTAACTAGCATATGATGGTGTTGGGCGT
GACTT
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Coding sequence (CDS) from alignment at ACJE01000001.1:1473890..1475844+

>ASPNIDRAFT_56880-T1 ID=ASPNIDRAFT_56880-T1|Name=ASPNIDRAFT_56880-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=3210bp|location=Sequence derived from alignment at ACJE01000001.1:1473890..1475844+ (Aspergillus niger ATCC 1015)
ATGGTCCTTCAGGATCTCGGGCGGCGAATCAACGCCGCCGTCAATGACCT
GACTCGCTCTAACAATTTGGACGAGAAGCAGGCCTTTGATGACATGATCA
AAGAGATCTGCGCCGCCTTGCTGTCCGCCGACGTCAACGTCCGCCTGGTC
CAGTCCCTCCGCAAATCCATCAAGTCCAGCGTCAACTTTGCCTCTCTTCC
TCCCGCCGTGAACAAGAAGCGTTTGATTCAGAAGGCCGTCTTCGATGAGC
TGGTTTCCCTGGTTGATCCCCATGCGGAGCCATTCCGTCCCAAGAAGGGC
CGCTCCAACGTGATCATGTTCGTCGGTCTACAGGGTGCCGGTAAAACCAC
CACCTGTACCAAGCTGGCCCGCCACTATCAGATGCGCGGCTTCAAGACCG
CCCTTGTCTGTGCCGATACCTTCCGAGCTGGTGCTTTCGACCAGCTGAAA
CAGAATGCCACCAAGGCCAAGATCCCCTACTACGGTAGCCTGACGCAAAC
CGACCCCGCCATCGTGGCAGCCGAGGGTGTGGCCAAGTTCAAGAAGGAGC
GTTTCGAAATCATCATTGTCGATACCAGTGGTCGTCATAAGCAGGAAGAA
GAGCTCTTCACCGAAATGACCCAGATTCAGACCGCCGTCACCCCCGACCA
GACCATCCTCGTCCTCGACAGCACCATCGGTCAGGCTGCCGAAGCCCAGT
CCTCCGCCTTCAAGGCCACCGCAGACTTCGGAGCCATCATCATCACCAAG
ACGGATGGTCACGCCGCAGGTGGTGGTGCTATTTCCGCCGTCGCCGCCAC
ACACACTCCCATTATCTACCTCGGTACCGGTGAGCACTTGATGGACCTGG
AACGTTTCGAGCCCAAGGCCTTCATCCAGAAGCTCCTGGGTATGGGTGAT
ATGGCCGGACTGGTAGAGCACGTACAAGCCGTGACCAAGGACTCGGCCTC
CGCCAAGGAAACATACAAGCACATCTCAGAAGGTATCTACACGCTGCGCG
ACTTCCGCGAGAACATCACCTCCATCATGAAGATGGGTCCTCTCTCCAAG
CTCTCCGGCATGATTCCCGGTCTCTCCAACCTGACCGCGGGACTTGATGA
CGAAGACGGCTCCATGAAGCTCCGCCGCATGATCTACATTTTCGACAGCA
TGACGGCCGCCGAACTCGACGGCGACGGCAAGATGTTCGTCGAACAGCCT
AGCCGCATGGTCCGGATCGCTTGCGGAAGCGGTACCACCGTCCGCGAAGT
CGAAGACCTGCTCTCCCAGCACCGCATGATGGCTGGTATGGCCAAGCGCG
TCGGCGGACAGAAGAAGCAGATGCAGCGTGCCCAGAACATGCTCAAGGGC
GGTAACAAGGAACAGCAGCTCGCCGCCATGCAGAAGCGCATGGCCGCCAT
GGGTGGTGCTGGCGGTGGTGGATTCCCCGGTATGCCCGGCATGGGCGACA
TGGCCAAGATGATGCAAATGCTGCAAGGTCAAGGAGGTGGCGGCGGTGGT
GGTCTTCCCGGCCTGGGTGGGATGGACCTACAAAGTATGATGAGCCAGAT
GAGTGGATTGATGGGCGGTGGCGGTGGTGGTGGTGGCCGCGGTAGAGGAC
GGTGAATGGTCCTTCAGGATCTCGGGCGGCGAATCAACGCCGCCGTCAAT
GACCTGACTCGCTCTAACAATTTGGACGAGAAGCAGGCCTTTGATGACAT
GATCAAAGAGATCTGCGCCGCCTTGCTGTCCGCCGACGTCAACGTCCGCC
TGGTCCAGTCCCTCCGCAAATCCATCAAGTCCAGCGTCAACTTTGCCTCT
CTTCCTCCCGCCGTGAACAAGAAGCGTTTGATTCAGAAGGCCGTCTTCGA
TGAGCTGGTTTCCCTGGTTGATCCCCATGCGGAGCCATTCCGTCCCAAGA
AGGGCCGCTCCAACGTGATCATGTTCGTCGGTCTACAGGGTGCCGGTAAA
ACCACCACCTGTACCAAGCTGGCCCGCCACTATCAGATGCGCGGCTTCAA
GACCGCCCTTGTCTGTGCCGATACCTTCCGAGCTGGTGCTTTCGACCAGC
TGAAACAGAATGCCACCAAGGCCAAGATCCCCTACTACGGTAGCCTGACG
CAAACCGACCCCGCCATCGTGGCAGCCGAGGGTGTGGCCAAGTTCAAGAA
GGAGCGTTTCGAAATCATCATTGTCGATACCAGTGGTCGTCATAAGCAGG
AAGAAGAGCTCTTCACCGAAATGACCCAGATTCAGACCGCCGTCACCCCC
GACCAGACCATCCTCGTCCTCGACAGCACCATCGGTCAGGCTGCCGAAGC
CCAGTCCTCCGCCTTCAAGGCCACCGCAGACTTCGGAGCCATCATCATCA
CCAAGACGGATGGTCACGCCGCAGGTGGTGGTGCTATTTCCGCCGTCGCC
GCCACACACACTCCCATTATCTACCTCGGTACCGGTGAGCACTTGATGGA
CCTGGAACGTTTCGAGCCCAAGGCCTTCATCCAGAAGCTCCTGGGTATGG
GTGATATGGCCGGACTGGTAGAGCACGTACAAGCCGTGACCAAGGACTCG
GCCTCCGCCAAGGAAACATACAAGCACATCTCAGAAGGTATCTACACGCT
GCGCGACTTCCGCGAGAACATCACCTCCATCATGAAGATGGGTCCTCTCT
CCAAGCTCTCCGGCATGATTCCCGGTCTCTCCAACCTGACCGCGGGACTT
GATGACGAAGACGGCTCCATGAAGCTCCGCCGCATGATCTACATTTTCGA
CAGCATGACGGCCGCCGAACTCGACGGCGACGGCAAGATGTTCGTCGAAC
AGCCTAGCCGCATGGTCCGGATCGCTTGCGGAAGCGGTACCACCGTCCGC
GAAGTCGAAGACCTGCTCTCCCAGCACCGCATGATGGCTGGTATGGCCAA
GCGCGTCGGCGGACAGAAGAAGCAGATGCAGCGTGCCCAGAACATGCTCA
AGGGCGGTAACAAGGAACAGCAGCTCGCCGCCATGCAGAAGCGCATGGCC
GCCATGGGTGGTGCTGGCGGTGGTGGATTCCCCGGTATGCCCGGCATGGG
CGACATGGCCAAGATGATGCAAATGCTGCAAGGTCAAGGAGGTGGCGGCG
GTGGTGGTCTTCCCGGCCTGGGTGGGATGGACCTACAAAGTATGATGAGC
CAGATGAGTGGATTGATGGGCGGTGGCGGTGGTGGTGGTGGCCGCGGTAG
AGGACGGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0048500signal recognition particle
Vocabulary: Biological Process
TermDefinition
GO:0006614SRP-dependent cotranslational protein targeting to membrane
Vocabulary: Molecular Function
TermDefinition
GO:0003924GTPase activity
GO:00083127S RNA binding
GO:0005525GTP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_56880ASPNIDRAFT_56880Aspergillus niger ATCC 1015gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_56880-T1.utr5p1ASPNIDRAFT_56880-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_56880-T1.exon1ASPNIDRAFT_56880-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_56880-T1.exon2ASPNIDRAFT_56880-T1.exon2Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_56880-T1.cdsASPNIDRAFT_56880-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_56880-T1.utr3p1ASPNIDRAFT_56880-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_56880-T1ASPNIDRAFT_56880-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09261V9P
DBxrefInterPro:IPR036225
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR022941
DBxrefInterPro:IPR036891
DBxrefInterPro:IPR042101
DBxrefInterPro:IPR006325
DBxrefInterPro:IPR004125
DBxrefInterPro:IPR000897
DBxrefInterPro:IPR013822
DBxrefInterPro:IPR003593
DBxrefPFAM:PF02978
DBxrefPFAM:PF02881
DBxrefPFAM:PF00448
DBxrefPFAM:PF02492
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000001.1supercontigACJE01000001.1:1473890..1475844 +
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