You are here

Home

ASPNIDRAFT_56887-T1, ASPNIDRAFT_56887-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_56887-T1
Unique NameASPNIDRAFT_56887-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000001.1:1421031..1422708-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_56887-T1 ID=ASPNIDRAFT_56887-T1|Name=ASPNIDRAFT_56887-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1678bp|location=Sequence derived from alignment at ACJE01000001.1:1421031..1422708- (Aspergillus niger ATCC 1015)
CTATCGTTCATTTCGACATTGCACCTCTGGGCCTCCCAGAATGATTTTCG
GCCTTCCCGGATAATAAATTTGATGGTTATCTACTCGCCTCAAATTGCAG
GAAATACCTGGCCCACTCGTTGAACGACGAACCGACGACGTTACACCCTC
CCGCCCACCCGATACCTCCTACCTCCGTTCTTTTACCTCCACCTCAACAC
TCACGCCCACCATGTCCGTTTGGAACCCCGATAATATTCGCGATGTTGCC
GAGTCGGTCGGTGTCGTAAACCTCAGCAATGATGTCACTGAGAACCTTGC
CCGCGACGTCGAGTACCGCATCGCGCAGGTCCTGGAAGAGGCCCTCAAAT
TCATGCGCCACAGTCGACGCACGCTACTCACGACACAAGATGTCGCGCAG
GCGCTGCGCGTGCTGGATGTGGAGCCACTGTACGGATACGAGTCTACAAG
GCCTTTGCGGTTCGGAGAGGCGTCACTGGGCCCTGGTCAGCCGTTGTTCT
ACGTGGAGGATGAGGAAGTGGACTTTGAGAAGTTGATAAATGCGCCGTTG
CCCAGGGTTCCTCGCGAGATCTCTTTCACAGGTAAACTTGGCCCTGCTGC
TCTATGGAAATATTTACAATGAAGTGTTGGCATGCTGACTCCATTAAGCC
CATTGGTTGGCGGTTGAAGGTGTACAACCGTCCATCCCTCAGAATCCCAC
GGCGGCCGACTCGAGAAACATGGAACTGATGTCCAAGGGACCCAACGCAA
GCTCTACATTGGCGGCCATGAGTGGAGGAGGAAATGTCTCCGTCAAGCCC
CTGGTGAAGCATGTGCTTTCTAAGGAGCTCCAGCTATACTTTGAGAAGGT
CTGCAACGCCTTCCTGGACGAGTCCAGTGAGGAATACAGGACGTCGGGTT
ATGCCAGTCTCCGAGAAGACCCCGGACTACACCAGCTGGTGCCATATTTC
GTGCAATTCATTTCGGAGAAGGTGACGCATGGGCTGAAGGATGTCTTTGT
CCTGACGCAGGTGATGCACATGGCCGAGGCTCTGGTACAGAACAAGTCTC
TCTACGTGGACCCATATGTGAGTCATGATTGTCACATGAACAACGCGGAT
TACATTCCACTGACTCCTGATAGATCGCCTCACTTGTTCCACCTATTCTG
ACGTGCCTGATCGGTCGACAACTCGGTGGCAGTGCTGAACTGACAGAGCA
ATTTGCCCTGCGCGACCTTGCCGCATCGCTTCTGGGCCTCATCGCCAAGA
AATATTCCAATTCGTCGCACACCCTCAAGCCACGACTGGCCCGGTCGTGC
CTGAAGACGTTCCTGGACCCGTCCAAACCCTTTGGGGCGCACTATGGCGC
GGTGATCGGACTACATGCGGTTGGCGGTGCAGAGGCGGTGCGGGTGCTGA
TCATGCCTAATCTGCCGACGTACGGCAACCTGCTCAAGGATGGCATGGCG
GAGGAGAGTCCACGCCGGCCGGAGGCAGAGCGGGTGCTTAGCGTGCTGCT
GGGGGTGCTGAACACGCTACGGGAGGGCCGGATGGCACTGGCCAACGGTC
ATGGCGGGATGGTGACGGATGGTCTTCGAGATCGGCTGAGTCAGAAAGTG
GGCGAGTTCCTGGCCGCGAAGATTAGTGACGCGGGGGAAGTTGACCTCGC
TCATGCCATTGTGGAGTCGTCCTCCTGA
back to top

Coding sequence (CDS) from alignment at ACJE01000001.1:1421031..1422708-

>ASPNIDRAFT_56887-T1 ID=ASPNIDRAFT_56887-T1|Name=ASPNIDRAFT_56887-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=4032bp|location=Sequence derived from alignment at ACJE01000001.1:1421031..1422708- (Aspergillus niger ATCC 1015)
ATCGCCTCACTTGTTCCACCTATTCTGACGTGCCTGATCGGTCGACAACT
CGGTGGCAGTGCTGAACTGACAGAGCAATTTGCCCTGCGCGACCTTGCCG
CATCGCTTCTGGGCCTCATCGCCAAGAAATATTCCAATTCGTCGCACACC
CTCAAGCCACGACTGGCCCGGTCGTGCCTGAAGACGTTCCTGGACCCGTC
CAAACCCTTTGGGGCGCACTATGGCGCGGTGATCGGACTACATGCGGTTG
GCGGTGCAGAGGCGGTGCGGGTGCTGATCATGCCTAATCTGCCGACGTAC
GGCAACCTGCTCAAGGATGGCATGGCGGAGGAGAGTCCACGCCGGCCGGA
GGCAGAGCGGGTGCTTAGCGTGCTGCTGGGGGTGCTGAACACGCTACGGG
AGGGCCGGATGGCACTGGCCAACGGTCATGGCGGGATGGTGACGGATGGT
CTTCGAGATCGGCTGAGTCAGAAAGTGGGCGAGTTCCTGGCCGCGAAGAT
TAGTGACGCGGGGGAAGTTGACCTCGCTCATGCCATTGTGGAGTCGTCCT
CCTGACCCATTGGTTGGCGGTTGAAGGTGTACAACCGTCCATCCCTCAGA
ATCCCACGGCGGCCGACTCGAGAAACATGGAACTGATGTCCAAGGGACCC
AACGCAAGCTCTACATTGGCGGCCATGAGTGGAGGAGGAAATGTCTCCGT
CAAGCCCCTGGTGAAGCATGTGCTTTCTAAGGAGCTCCAGCTATACTTTG
AGAAGGTCTGCAACGCCTTCCTGGACGAGTCCAGTGAGGAATACAGGACG
TCGGGTTATGCCAGTCTCCGAGAAGACCCCGGACTACACCAGCTGGTGCC
ATATTTCGTGCAATTCATTTCGGAGAAGGTGACGCATGGGCTGAAGGATG
TCTTTGTCCTGACGCAGGTGATGCACATGGCCGAGGCTCTGGTACAGAAC
AAGTCTCTCTACGTGGACCCATATATGTCCGTTTGGAACCCCGATAATAT
TCGCGATGTTGCCGAGTCGGTCGGTGTCGTAAACCTCAGCAATGATGTCA
CTGAGAACCTTGCCCGCGACGTCGAGTACCGCATCGCGCAGGTCCTGGAA
GAGGCCCTCAAATTCATGCGCCACAGTCGACGCACGCTACTCACGACACA
AGATGTCGCGCAGGCGCTGCGCGTGCTGGATGTGGAGCCACTGTACGGAT
ACGAGTCTACAAGGCCTTTGCGGTTCGGAGAGGCGTCACTGGGCCCTGGT
CAGCCGTTGTTCTACGTGGAGGATGAGGAAGTGGACTTTGAGAAGTTGAT
AAATGCGCCGTTGCCCAGGGTTCCTCGCGAGATCTCTTTCACAGATCGCC
TCACTTGTTCCACCTATTCTGACGTGCCTGATCGGTCGACAACTCGGTGG
CAGTGCTGAACTGACAGAGCAATTTGCCCTGCGCGACCTTGCCGCATCGC
TTCTGGGCCTCATCGCCAAGAAATATTCCAATTCGTCGCACACCCTCAAG
CCACGACTGGCCCGGTCGTGCCTGAAGACGTTCCTGGACCCGTCCAAACC
CTTTGGGGCGCACTATGGCGCGGTGATCGGACTACATGCGGTTGGCGGTG
CAGAGGCGGTGCGGGTGCTGATCATGCCTAATCTGCCGACGTACGGCAAC
CTGCTCAAGGATGGCATGGCGGAGGAGAGTCCACGCCGGCCGGAGGCAGA
GCGGGTGCTTAGCGTGCTGCTGGGGGTGCTGAACACGCTACGGGAGGGCC
GGATGGCACTGGCCAACGGTCATGGCGGGATGGTGACGGATGGTCTTCGA
GATCGGCTGAGTCAGAAAGTGGGCGAGTTCCTGGCCGCGAAGATTAGTGA
CGCGGGGGAAGTTGACCTCGCTCATGCCATTGTGGAGTCGTCCTCCTGAC
CCATTGGTTGGCGGTTGAAGGTGTACAACCGTCCATCCCTCAGAATCCCA
CGGCGGCCGACTCGAGAAACATGGAACTGATGTCCAAGGGACCCAACGCA
AGCTCTACATTGGCGGCCATGAGTGGAGGAGGAAATGTCTCCGTCAAGCC
CCTGGTGAAGCATGTGCTTTCTAAGGAGCTCCAGCTATACTTTGAGAAGG
TCTGCAACGCCTTCCTGGACGAGTCCAGTGAGGAATACAGGACGTCGGGT
TATGCCAGTCTCCGAGAAGACCCCGGACTACACCAGCTGGTGCCATATTT
CGTGCAATTCATTTCGGAGAAGGTGACGCATGGGCTGAAGGATGTCTTTG
TCCTGACGCAGGTGATGCACATGGCCGAGGCTCTGGTACAGAACAAGTCT
CTCTACGTGGACCCATATATGTCCGTTTGGAACCCCGATAATATTCGCGA
TGTTGCCGAGTCGGTCGGTGTCGTAAACCTCAGCAATGATGTCACTGAGA
ACCTTGCCCGCGACGTCGAGTACCGCATCGCGCAGGTCCTGGAAGAGGCC
CTCAAATTCATGCGCCACAGTCGACGCACGCTACTCACGACACAAGATGT
CGCGCAGGCGCTGCGCGTGCTGGATGTGGAGCCACTGTACGGATACGAGT
CTACAAGGCCTTTGCGGTTCGGAGAGGCGTCACTGGGCCCTGGTCAGCCG
TTGTTCTACGTGGAGGATGAGGAAGTGGACTTTGAGAAGTTGATAAATGC
GCCGTTGCCCAGGGTTCCTCGCGAGATCTCTTTCACAGATCGCCTCACTT
GTTCCACCTATTCTGACGTGCCTGATCGGTCGACAACTCGGTGGCAGTGC
TGAACTGACAGAGCAATTTGCCCTGCGCGACCTTGCCGCATCGCTTCTGG
GCCTCATCGCCAAGAAATATTCCAATTCGTCGCACACCCTCAAGCCACGA
CTGGCCCGGTCGTGCCTGAAGACGTTCCTGGACCCGTCCAAACCCTTTGG
GGCGCACTATGGCGCGGTGATCGGACTACATGCGGTTGGCGGTGCAGAGG
CGGTGCGGGTGCTGATCATGCCTAATCTGCCGACGTACGGCAACCTGCTC
AAGGATGGCATGGCGGAGGAGAGTCCACGCCGGCCGGAGGCAGAGCGGGT
GCTTAGCGTGCTGCTGGGGGTGCTGAACACGCTACGGGAGGGCCGGATGG
CACTGGCCAACGGTCATGGCGGGATGGTGACGGATGGTCTTCGAGATCGG
CTGAGTCAGAAAGTGGGCGAGTTCCTGGCCGCGAAGATTAGTGACGCGGG
GGAAGTTGACCTCGCTCATGCCATTGTGGAGTCGTCCTCCTGACCCATTG
GTTGGCGGTTGAAGGTGTACAACCGTCCATCCCTCAGAATCCCACGGCGG
CCGACTCGAGAAACATGGAACTGATGTCCAAGGGACCCAACGCAAGCTCT
ACATTGGCGGCCATGAGTGGAGGAGGAAATGTCTCCGTCAAGCCCCTGGT
GAAGCATGTGCTTTCTAAGGAGCTCCAGCTATACTTTGAGAAGGTCTGCA
ACGCCTTCCTGGACGAGTCCAGTGAGGAATACAGGACGTCGGGTTATGCC
AGTCTCCGAGAAGACCCCGGACTACACCAGCTGGTGCCATATTTCGTGCA
ATTCATTTCGGAGAAGGTGACGCATGGGCTGAAGGATGTCTTTGTCCTGA
CGCAGGTGATGCACATGGCCGAGGCTCTGGTACAGAACAAGTCTCTCTAC
GTGGACCCATATATGTCCGTTTGGAACCCCGATAATATTCGCGATGTTGC
CGAGTCGGTCGGTGTCGTAAACCTCAGCAATGATGTCACTGAGAACCTTG
CCCGCGACGTCGAGTACCGCATCGCGCAGGTCCTGGAAGAGGCCCTCAAA
TTCATGCGCCACAGTCGACGCACGCTACTCACGACACAAGATGTCGCGCA
GGCGCTGCGCGTGCTGGATGTGGAGCCACTGTACGGATACGAGTCTACAA
GGCCTTTGCGGTTCGGAGAGGCGTCACTGGGCCCTGGTCAGCCGTTGTTC
TACGTGGAGGATGAGGAAGTGGACTTTGAGAAGTTGATAAATGCGCCGTT
GCCCAGGGTTCCTCGCGAGATCTCTTTCACAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0046982protein heterodimerization activity
Vocabulary: Biological Process
TermDefinition
GO:0006367transcription initiation from RNA polymerase II promoter
GO:0006352DNA-templated transcription, initiation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_56887ASPNIDRAFT_56887Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_56887-T1ASPNIDRAFT_56887-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_56887-T1.cdsASPNIDRAFT_56887-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_56887-T1.exon3ASPNIDRAFT_56887-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_56887-T1.exon2ASPNIDRAFT_56887-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_56887-T1.exon1ASPNIDRAFT_56887-T1.exon1Aspergillus niger ATCC 1015exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_56887-T1.utr5p1ASPNIDRAFT_56887-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


Properties
Property NameValue
NoteantiSMASH:Cluster_10000011.9
NoteBUSCO:EOG09260THV
DBxrefInterPro:IPR016024
DBxrefInterPro:IPR011442
DBxrefInterPro:IPR009072
DBxrefInterPro:IPR004823
DBxrefPFAM:PF07571
DBxrefPFAM:PF02969
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000001.1supercontigACJE01000001.1:1421031..1422708 -
Powered by Drupal