You are here

Home

ASPNIDRAFT_56895-T1, ASPNIDRAFT_56895-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_56895-T1
Unique NameASPNIDRAFT_56895-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000001.1:1371212..1372025-

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_56895-T1 ID=ASPNIDRAFT_56895-T1|Name=ASPNIDRAFT_56895-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=814bp|location=Sequence derived from alignment at ACJE01000001.1:1371212..1372025- (Aspergillus niger ATCC 1015)
ATGGCAGCACAAGCTCCTGCCGCGCGACGCGGGGCTCTCATTGTGGTCGA
GGGGTTGGACCGCGCGGGCAAGTCCAGTCAATGCGAGTCTCTACACCAGA
AACTACAAGATTTAGGCCATTCTGTCAAGTACATTCGCTTCCCAGGTAGC
TCCCCTCCCTTTTTTGATTGTCCTCGTGAACATCGCTCTAATCCACACCC
TCCGCAGACCGAACCACTCCCATTGGAAAGCTCATCGATGGCTATCTACG
TGGCCAGTCGCAGTTGGACGACCACTCCATCCATCTCCTCTTCTCCGCCA
ATCGTTGGGAGATTGCTCGGGCTATTGAGGAGGATATAGCAGCGGGCATC
ACCGTCATCGTGGACCGCTACTCCTATTCCGGTGCCGTGTACTCGGCCGC
CAAGGCCAATCCCACCTTGTCCCTGGAGTGGGCTTGGACCCCGGAGATCG
GCCTGCCCCAGCCTGACCTATGCCTTTTCCTGAGTATCGCCCCAGACGAA
GCGGCCAAGCGCGGGGGGTTCGGTGCCGAACGCTATGAGAATGAGACTAT
GCAAAGCCGAGTGCGGGAACTGTTCCAAACCATCTTTCGCGTCCAACGCA
GCGGTGACATTCGCGTAATCGATGCTGGCAGGTCATTTGAAGCTGTTTCG
GTGGACATTGAGAAGAGCGTGGTGGACTGCATAGCTCGCTTGGACGCCAT
CGGGCCACTGAAGCGATTCGTGTCAATTGCTGTTTAACTTCTCGAAAGAA
GTGATAGTGAGAAAACCTGCGAAGCAAATAGGAGAATCATCCCAAATCCT
CCATCTCTTCGCAG
back to top

Coding sequence (CDS) from alignment at ACJE01000001.1:1371212..1372025-

>ASPNIDRAFT_56895-T1 ID=ASPNIDRAFT_56895-T1|Name=ASPNIDRAFT_56895-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1350bp|location=Sequence derived from alignment at ACJE01000001.1:1371212..1372025- (Aspergillus niger ATCC 1015)
ACCGAACCACTCCCATTGGAAAGCTCATCGATGGCTATCTACGTGGCCAG
TCGCAGTTGGACGACCACTCCATCCATCTCCTCTTCTCCGCCAATCGTTG
GGAGATTGCTCGGGCTATTGAGGAGGATATAGCAGCGGGCATCACCGTCA
TCGTGGACCGCTACTCCTATTCCGGTGCCGTGTACTCGGCCGCCAAGGCC
AATCCCACCTTGTCCCTGGAGTGGGCTTGGACCCCGGAGATCGGCCTGCC
CCAGCCTGACCTATGCCTTTTCCTGAGTATCGCCCCAGACGAAGCGGCCA
AGCGCGGGGGGTTCGGTGCCGAACGCTATGAGAATGAGACTATGCAAAGC
CGAGTGCGGGAACTGTTCCAAACCATCTTTCGCGTCCAACGCAGCGGTGA
CATTCGCGTAATCGATGCTGGCAGGTCATTTGAAGCTGTTTCGGTGGACA
TTGAGAAGAGCGTGGTGGACTGCATAGCTCGCTTGGACGCCATCGGGCCA
CTGAAGCGATTCGTGTCAATTGCTGTTTAAATGGCAGCACAAGCTCCTGC
CGCGCGACGCGGGGCTCTCATTGTGGTCGAGGGGTTGGACCGCGCGGGCA
AGTCCAGTCAATGCGAGTCTCTACACCAGAAACTACAAGATTTAGGCCAT
TCTGTCAAGTACATTCGCTTCCCAGACCGAACCACTCCCATTGGAAAGCT
CATCGATGGCTATCTACGTGGCCAGTCGCAGTTGGACGACCACTCCATCC
ATCTCCTCTTCTCCGCCAATCGTTGGGAGATTGCTCGGGCTATTGAGGAG
GATATAGCAGCGGGCATCACCGTCATCGTGGACCGCTACTCCTATTCCGG
TGCCGTGTACTCGGCCGCCAAGGCCAATCCCACCTTGTCCCTGGAGTGGG
CTTGGACCCCGGAGATCGGCCTGCCCCAGCCTGACCTATGCCTTTTCCTG
AGTATCGCCCCAGACGAAGCGGCCAAGCGCGGGGGGTTCGGTGCCGAACG
CTATGAGAATGAGACTATGCAAAGCCGAGTGCGGGAACTGTTCCAAACCA
TCTTTCGCGTCCAACGCAGCGGTGACATTCGCGTAATCGATGCTGGCAGG
TCATTTGAAGCTGTTTCGGTGGACATTGAGAAGAGCGTGGTGGACTGCAT
AGCTCGCTTGGACGCCATCGGGCCACTGAAGCGATTCGTGTCAATTGCTG
TTTAAATGGCAGCACAAGCTCCTGCCGCGCGACGCGGGGCTCTCATTGTG
GTCGAGGGGTTGGACCGCGCGGGCAAGTCCAGTCAATGCGAGTCTCTACA
CCAGAAACTACAAGATTTAGGCCATTCTGTCAAGTACATTCGCTTCCCAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006233dTDP biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0004798thymidylate kinase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_56895ASPNIDRAFT_56895Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_56895-T1ASPNIDRAFT_56895-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_56895-T1.cdsASPNIDRAFT_56895-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_56895-T1.utr3p1ASPNIDRAFT_56895-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_56895-T1.exon2ASPNIDRAFT_56895-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_56895-T1.exon1ASPNIDRAFT_56895-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
NoteBUSCO:EOG09261F9G
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR018095
DBxrefInterPro:IPR039430
DBxrefInterPro:IPR018094
DBxrefPFAM:PF02223
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000001.1supercontigACJE01000001.1:1371212..1372025 -
Powered by Drupal