You are here

Home

ASPNIDRAFT_57002-T1, ASPNIDRAFT_57002-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_57002-T1
Unique NameASPNIDRAFT_57002-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000005.1:589069..590721-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_57002-T1 ID=ASPNIDRAFT_57002-T1|Name=ASPNIDRAFT_57002-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1653bp|location=Sequence derived from alignment at ACJE01000005.1:589069..590721- (Aspergillus niger ATCC 1015)
ATGATGTTTCGAAAATCCGCTTCCTTCCTGGGCCAACGGCTCATGGCCGT
TTGTCTCCTGTGCTGGTGCGTTTCGCTAGCGACCGCCGCAAGCACAGAAG
AATGGAAGACGCGATCCATCTACCAGACGATGACGGATCGTTTTGCCCTC
ACTAATGGTTCGACCACCGCACCATGCAATACTACGGTAGCCAACTACTG
TGGCGGGTCTTGGCAGGGGACGATCGATAAGCTGGACTACATCCAAGGCA
TGGGGTTCGATGCCATCATGATCTCTCCCGTAATTAAAAACATTGCGGGG
CGATCTAAGGACGGTGAGGCCTACCATGGATACTGGCCTCTGGATCTATA
CGAGATCAATTCTCATTTCGGAACCCGGGAGGAACTGTTGAAGCTGAGCG
AGGAGATCCACGCACGCGGCATGTACTTGCTGCTGGACGTCGTCATCAAT
AATATGGCTTACATGACGGACGGCGAGGATCCTGCGACAACCATTGACTA
CAATGTTTTCCCTCAGTTCAATGGATCTTCATACTTCCACCCCTACTGCC
TTATTACGAACTGGAACAACTATACGGACGCGCAGTGGTGTCAGACTGGT
GACAATTATACTGCACTCCCAGATCTGTACACAGAACACACCGCGGTGCA
GGACATCTTAATGGACTGGAGTAAATCGGTCATCAGCAATTACTCCGTCG
ACGGGCTACGAATCGACGCTGCCAAGTCCCTCACTCCCAGCTTTCTGCCT
ACATATGCGAGTACCGTGGGCGGATTCATGACCGGCGAAGTCATGGATTC
GAACGCCACCAACGTGTGCAAATATCAGACGGATTACCTGCCAAGTCTTC
CCAACTACCCCCTCTATTACTCCATGATCACAGCCTTCCTCAACGGCGAG
CCTGCGACTTTGCTCGAGGAAATCGCGACGATCAATGATCTTTGCCCGGA
TACGTTCGCAATGGTCAACTTCATCGAAGATCAAGACGTTGACCGATGGG
CCTACATGAATGACGACATTATGCTAGCTAAAACGGCACTGACCTTCATG
ATGCTCTACGACGGTATCCCCTTGGTCTACCAGGGTCTGGAGCAGGCCAT
TGCCTATTCCAACCGAGCGGCCTTGTGGTTGACGGATTTCGACACCAATG
CGACGCTATATAAACACATCAAGAAACTCAATGCCATCCGCAAACATGCC
ATTAACCTTGATTCCAGCTACATCAGTTCGAAAACATATCCCATCTATCA
AGGAGGTAGCGAGTTGGCTTTCTGGAAGGGCAAAAATGGACGCCAAGTCA
TCATGGTCTTATCTACGGCGGGGTCTGGTGGTTCGGCTTATACTCTGACA
CTACCTGTGAGCTATGGGGCAAGCGAGGTGGTCACGGAAGTGCTGAACTG
CGTCAACTATACGGTCAACACTTACAGTCAATTGGTCGTGGACATGGATA
AGGGCGAGCCTCGGGTCTTCTTTCCCGCTTCGATGATGCCGGGGAGCGGG
CTGTGTGGCTACAATACTTCTAATGTGACGTATTCTGAGCTGAGACTTGC
TGCTGTGGGCTCTTCGTCGTCTGCTGGTAGCCACTCTGTCATACCGTCTG
CTTTTTCTTTGCTTTTCATGGCGATAGTTGCATTTTTGGCATTCCGGATA
TAA
back to top

Coding sequence (CDS) from alignment at ACJE01000005.1:589069..590721-

>ASPNIDRAFT_57002-T1 ID=ASPNIDRAFT_57002-T1|Name=ASPNIDRAFT_57002-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1653bp|location=Sequence derived from alignment at ACJE01000005.1:589069..590721- (Aspergillus niger ATCC 1015)
ATGATGTTTCGAAAATCCGCTTCCTTCCTGGGCCAACGGCTCATGGCCGT
TTGTCTCCTGTGCTGGTGCGTTTCGCTAGCGACCGCCGCAAGCACAGAAG
AATGGAAGACGCGATCCATCTACCAGACGATGACGGATCGTTTTGCCCTC
ACTAATGGTTCGACCACCGCACCATGCAATACTACGGTAGCCAACTACTG
TGGCGGGTCTTGGCAGGGGACGATCGATAAGCTGGACTACATCCAAGGCA
TGGGGTTCGATGCCATCATGATCTCTCCCGTAATTAAAAACATTGCGGGG
CGATCTAAGGACGGTGAGGCCTACCATGGATACTGGCCTCTGGATCTATA
CGAGATCAATTCTCATTTCGGAACCCGGGAGGAACTGTTGAAGCTGAGCG
AGGAGATCCACGCACGCGGCATGTACTTGCTGCTGGACGTCGTCATCAAT
AATATGGCTTACATGACGGACGGCGAGGATCCTGCGACAACCATTGACTA
CAATGTTTTCCCTCAGTTCAATGGATCTTCATACTTCCACCCCTACTGCC
TTATTACGAACTGGAACAACTATACGGACGCGCAGTGGTGTCAGACTGGT
GACAATTATACTGCACTCCCAGATCTGTACACAGAACACACCGCGGTGCA
GGACATCTTAATGGACTGGAGTAAATCGGTCATCAGCAATTACTCCGTCG
ACGGGCTACGAATCGACGCTGCCAAGTCCCTCACTCCCAGCTTTCTGCCT
ACATATGCGAGTACCGTGGGCGGATTCATGACCGGCGAAGTCATGGATTC
GAACGCCACCAACGTGTGCAAATATCAGACGGATTACCTGCCAAGTCTTC
CCAACTACCCCCTCTATTACTCCATGATCACAGCCTTCCTCAACGGCGAG
CCTGCGACTTTGCTCGAGGAAATCGCGACGATCAATGATCTTTGCCCGGA
TACGTTCGCAATGGTCAACTTCATCGAAGATCAAGACGTTGACCGATGGG
CCTACATGAATGACGACATTATGCTAGCTAAAACGGCACTGACCTTCATG
ATGCTCTACGACGGTATCCCCTTGGTCTACCAGGGTCTGGAGCAGGCCAT
TGCCTATTCCAACCGAGCGGCCTTGTGGTTGACGGATTTCGACACCAATG
CGACGCTATATAAACACATCAAGAAACTCAATGCCATCCGCAAACATGCC
ATTAACCTTGATTCCAGCTACATCAGTTCGAAAACATATCCCATCTATCA
AGGAGGTAGCGAGTTGGCTTTCTGGAAGGGCAAAAATGGACGCCAAGTCA
TCATGGTCTTATCTACGGCGGGGTCTGGTGGTTCGGCTTATACTCTGACA
CTACCTGTGAGCTATGGGGCAAGCGAGGTGGTCACGGAAGTGCTGAACTG
CGTCAACTATACGGTCAACACTTACAGTCAATTGGTCGTGGACATGGATA
AGGGCGAGCCTCGGGTCTTCTTTCCCGCTTCGATGATGCCGGGGAGCGGG
CTGTGTGGCTACAATACTTCTAATGTGACGTATTCTGAGCTGAGACTTGC
TGCTGTGGGCTCTTCGTCGTCTGCTGGTAGCCACTCTGTCATACCGTCTG
CTTTTTCTTTGCTTTTCATGGCGATAGTTGCATTTTTGGCATTCCGGATA
TAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0016052carbohydrate catabolic process
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO:0004556alpha-amylase activity
GO:0003824catalytic activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_57002ASPNIDRAFT_57002Aspergillus niger ATCC 1015gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_57002-T1.cdsASPNIDRAFT_57002-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_57002-T1.exon1ASPNIDRAFT_57002-T1.exon1Aspergillus niger ATCC 1015exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_57002-T1ASPNIDRAFT_57002-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteSECRETED:SignalP(1-29)
NoteCAZy:GH13_15
NoteCAZy:GH13_27
NoteCAZy:GH13_7
NoteCAZy:GH13_19
NoteCAZy:GH13_20
NoteCAZy:GH13_36
NoteCAZy:GH13_2
NoteCAZy:GH13
NoteCAZy:GH13_1
DBxrefInterPro:IPR017853
DBxrefInterPro:IPR015340
DBxrefInterPro:IPR013780
DBxrefInterPro:IPR013777
DBxrefInterPro:IPR006047
DBxrefPFAM:PF09260
DBxrefPFAM:PF00128
Productalpha-amylase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000005.1supercontigACJE01000005.1:589069..590721 -
Powered by Drupal