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ASPNIDRAFT_57253-T1, ASPNIDRAFT_57253-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_57253-T1
Unique NameASPNIDRAFT_57253-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000012.1:366932..368095-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_57253-T1 ID=ASPNIDRAFT_57253-T1|Name=ASPNIDRAFT_57253-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1164bp|location=Sequence derived from alignment at ACJE01000012.1:366932..368095- (Aspergillus niger ATCC 1015)
TTACAGATCCGTCGTTGGTCTCCAGCGTCCATACTAATTAGACCTTCTCC
GATATTTTCTTCTCCTCCTCGATCCTCCTGCTACAGACCATCTGCTGCAC
TTCCTCGCCCTCTCGGTAGTTAGCTACTGTGAGGCTGACGAAGCTTTGAC
TATTGCCTCATAGTTCTTGAATCCTTTCTATTCTTATCTTTCAACTGTCC
AGACGATACAAACCTACTTTGCCTGCTTATTCGGAAGAGGGAAAACAACA
CAAATTGCCTGTTCTTCCCAGATTAATTTACCCATCACCAAACTTCTTGC
ACGATGTCTGCCAATCGAGCAAGGCGTATCGCCAAAGAGATCGCCGACAT
CCACGCCGACACACAGTCGCAAATCACGGCTGAACCACTGCACGGTGGGG
AGGATCTTACACATCTTCGAGGCACGTTCCCAGGGCCTCCAGGAACACCC
TATGAAGGTGGAACCTATACCATCGACATTAAAATCCCCAACGATTATCC
ATTTCGGCCTCCCCACATGAAGTTTGTAACCAAGGTCTGGCATCCCAACG
TCAGCAGTCAAACAGTAAGTCACCTCCAGTCATGTATGCTCAGGCTGTCT
CTAGTTTCCTGTTAATAAAGCTGATTGCCCAGGGTGCCATCTGCCTAGAC
ACTCTTTCCACTGCGTGGTCGCCGGTGCTCACCATCAAGTCTGCCCTTCT
GTCACTGCAATCCCTGCTAAGCACACCCGAACCCAAAGATCCCCAAGATG
CTGAGGTCGCCACGATGCTCCTTCGGAGACCGCAGGAGTTTGCACGAGTT
GCTCAGGAGTGGGCTGTAATGTATGCAGGAGCTCCCAGAAGGCATGCAGG
TGAAGGCAGCGGCGGTGTGACAGACGAAACTCTTCGACTGCAGGAGATCA
AGTCGAAAGAAGAGCAGGAACAAGAGGATTTAAGCAAGTATGTACACGTG
TGTAGGACAAACCTAATCTTGGCTAATCTTTCTGTGCAGATACGACGGCT
ACAACAAAGACTTGATCGACCGATTCTGTAACATGGGATTTGACGTCGAC
CGCGTTGTAGCCGCATTCAAATACTACGGCATTGATCGAATGGACGGAGA
AGACTACGAGCTGGAGGAGGCGTACATGGGAGACATTACAGCGCGGCTCC
TCGGCGAGCCGTAG
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Coding sequence (CDS) from alignment at ACJE01000012.1:366932..368095-

>ASPNIDRAFT_57253-T1 ID=ASPNIDRAFT_57253-T1|Name=ASPNIDRAFT_57253-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2223bp|location=Sequence derived from alignment at ACJE01000012.1:366932..368095- (Aspergillus niger ATCC 1015)
ATACGACGGCTACAACAAAGACTTGATCGACCGATTCTGTAACATGGGAT
TTGACGTCGACCGCGTTGTAGCCGCATTCAAATACTACGGCATTGATCGA
ATGGACGGAGAAGACTACGAGCTGGAGGAGGCGTACATGGGAGACATTAC
AGCGCGGCTCCTCGGCGAGCCGTAGGGTGCCATCTGCCTAGACACTCTTT
CCACTGCGTGGTCGCCGGTGCTCACCATCAAGTCTGCCCTTCTGTCACTG
CAATCCCTGCTAAGCACACCCGAACCCAAAGATCCCCAAGATGCTGAGGT
CGCCACGATGCTCCTTCGGAGACCGCAGGAGTTTGCACGAGTTGCTCAGG
AGTGGGCTGTAATGTATGCAGGAGCTCCCAGAAGGCATGCAGGTGAAGGC
AGCGGCGGTGTGACAGACGAAACTCTTCGACTGCAGGAGATCAAGTCGAA
AGAAGAGCAGGAACAAGAGGATTTAAGCAAATGTCTGCCAATCGAGCAAG
GCGTATCGCCAAAGAGATCGCCGACATCCACGCCGACACACAGTCGCAAA
TCACGGCTGAACCACTGCACGGTGGGGAGGATCTTACACATCTTCGAGGC
ACGTTCCCAGGGCCTCCAGGAACACCCTATGAAGGTGGAACCTATACCAT
CGACATTAAAATCCCCAACGATTATCCATTTCGGCCTCCCCACATGAAGT
TTGTAACCAAGGTCTGGCATCCCAACGTCAGCAGTCAAACAATACGACGG
CTACAACAAAGACTTGATCGACCGATTCTGTAACATGGGATTTGACGTCG
ACCGCGTTGTAGCCGCATTCAAATACTACGGCATTGATCGAATGGACGGA
GAAGACTACGAGCTGGAGGAGGCGTACATGGGAGACATTACAGCGCGGCT
CCTCGGCGAGCCGTAGGGTGCCATCTGCCTAGACACTCTTTCCACTGCGT
GGTCGCCGGTGCTCACCATCAAGTCTGCCCTTCTGTCACTGCAATCCCTG
CTAAGCACACCCGAACCCAAAGATCCCCAAGATGCTGAGGTCGCCACGAT
GCTCCTTCGGAGACCGCAGGAGTTTGCACGAGTTGCTCAGGAGTGGGCTG
TAATGTATGCAGGAGCTCCCAGAAGGCATGCAGGTGAAGGCAGCGGCGGT
GTGACAGACGAAACTCTTCGACTGCAGGAGATCAAGTCGAAAGAAGAGCA
GGAACAAGAGGATTTAAGCAAATGTCTGCCAATCGAGCAAGGCGTATCGC
CAAAGAGATCGCCGACATCCACGCCGACACACAGTCGCAAATCACGGCTG
AACCACTGCACGGTGGGGAGGATCTTACACATCTTCGAGGCACGTTCCCA
GGGCCTCCAGGAACACCCTATGAAGGTGGAACCTATACCATCGACATTAA
AATCCCCAACGATTATCCATTTCGGCCTCCCCACATGAAGTTTGTAACCA
AGGTCTGGCATCCCAACGTCAGCAGTCAAACAATACGACGGCTACAACAA
AGACTTGATCGACCGATTCTGTAACATGGGATTTGACGTCGACCGCGTTG
TAGCCGCATTCAAATACTACGGCATTGATCGAATGGACGGAGAAGACTAC
GAGCTGGAGGAGGCGTACATGGGAGACATTACAGCGCGGCTCCTCGGCGA
GCCGTAGGGTGCCATCTGCCTAGACACTCTTTCCACTGCGTGGTCGCCGG
TGCTCACCATCAAGTCTGCCCTTCTGTCACTGCAATCCCTGCTAAGCACA
CCCGAACCCAAAGATCCCCAAGATGCTGAGGTCGCCACGATGCTCCTTCG
GAGACCGCAGGAGTTTGCACGAGTTGCTCAGGAGTGGGCTGTAATGTATG
CAGGAGCTCCCAGAAGGCATGCAGGTGAAGGCAGCGGCGGTGTGACAGAC
GAAACTCTTCGACTGCAGGAGATCAAGTCGAAAGAAGAGCAGGAACAAGA
GGATTTAAGCAAATGTCTGCCAATCGAGCAAGGCGTATCGCCAAAGAGAT
CGCCGACATCCACGCCGACACACAGTCGCAAATCACGGCTGAACCACTGC
ACGGTGGGGAGGATCTTACACATCTTCGAGGCACGTTCCCAGGGCCTCCA
GGAACACCCTATGAAGGTGGAACCTATACCATCGACATTAAAATCCCCAA
CGATTATCCATTTCGGCCTCCCCACATGAAGTTTGTAACCAAGGTCTGGC
ATCCCAACGTCAGCAGTCAAACA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
UBC1_2ASPNIDRAFT_57253Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_57253-T1ASPNIDRAFT_57253-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_57253-T1.cdsASPNIDRAFT_57253-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_57253-T1.exon3ASPNIDRAFT_57253-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_57253-T1.exon2ASPNIDRAFT_57253-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_57253-T1.exon1ASPNIDRAFT_57253-T1.exon1Aspergillus niger ATCC 1015exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_57253-T1.utr5p1ASPNIDRAFT_57253-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR009060
DBxrefInterPro:IPR023313
DBxrefInterPro:IPR000608
DBxrefInterPro:IPR015368
DBxrefInterPro:IPR016135
DBxrefPFAM:PF00179
DBxrefPFAM:PF09288
ProductUbiquitin-conjugating enzyme E2 1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000012.1supercontigACJE01000012.1:366932..368095 -
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