You are here

Home

ATCC10864_000029-T1, ATCC10864_000029-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_000029-T1
Unique NameATCC10864_000029-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000006:89615..90506-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_000029-T1 ID=ATCC10864_000029-T1|Name=ATCC10864_000029-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=892bp|location=Sequence derived from alignment at MCQH01000006:89615..90506- (Aspergillus niger ATCC 10864)
ATGGCCTCCATCGCGCGCCAGTCTTCTCCCCTCCTCCGGTCGGCGTTCCG
CGCTCCCTTCGCGACTAAGAATGTCGCGCAGGTCGTGGCTTTTCATGCTT
CCGCTAAGAAGCAGATCTTGCCTCCTTTGCCTCGTGAGTTGATTATCTAG
GAATTGGGTGCGATTGCATATTTGGGATGAGTTATGCTAATGGGTTGGGT
GGTTTACAGAGACTATTCAGGGAACGAGTATGTGATTCTCCGGTTGCTCG
GTTGTTGGTTTTGGTTTTGTCTACGGGGAAACGATACCCGGGAATATCGA
CTGTGCTCGGATGACCATGATTGATTTTGAAAACAACATGCATGATGCTT
GGAATATGCTCTGACAGCTCGACGCAGTGAACGACCCCGCTCCCATCCCC
AAGTCTCACCCTACCGAGGGTAGCTACCACTGGACTTTTGAGAGGTGCGT
TGCCTCCACTTGAGATATCCATCAGATATATATGGATGGATTGAAGGCAT
TGATGAATAGGGTATTGGAAAGCTAACGGATAACAGAATCGTCTCTGCCG
GTCTCGTCCCTCTCTGCATTGCTCCCTTCGCTGCTGGCTCCATGAGCCCC
GTCATGGACGCCGTCATCTGCTCCGCTATCGTCGTTCACTCGCACATTGG
TTTCCAGTACGTTCTCCCTTTGCCTTTACTGAGCCGCGCGTGTGCAAGTT
ATGTCCTAGGGGCTAATTAATGACAGCGCCTCCATCACCGACTACTTCCC
TACTCGCCGTGTCCCCAAGACCCACACCTTCATGATCTGGCTGCTCCGCG
CGTTCACCCTCAGCACGGCTGTCGGTCTGTACGAGTTCGAGACGAACGAC
GTCGGTGTCACGGAGGCTCTCCGCCGGGTGTGGAACGCATAG
back to top

Coding sequence (CDS) from alignment at MCQH01000006:89615..90506-

>ATCC10864_000029-T1 ID=ATCC10864_000029-T1|Name=ATCC10864_000029-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1944bp|location=Sequence derived from alignment at MCQH01000006:89615..90506- (Aspergillus niger ATCC 10864)
CGCCTCCATCACCGACTACTTCCCTACTCGCCGTGTCCCCAAGACCCACA
CCTTCATGATCTGGCTGCTCCGCGCGTTCACCCTCAGCACGGCTGTCGGT
CTGTACGAGTTCGAGACGAACGACGTCGGTGTCACGGAGGCTCTCCGCCG
GGTGTGGAACGCATAGAATCGTCTCTGCCGGTCTCGTCCCTCTCTGCATT
GCTCCCTTCGCTGCTGGCTCCATGAGCCCCGTCATGGACGCCGTCATCTG
CTCCGCTATCGTCGTTCACTCGCACATTGGTTTCCATGAACGACCCCGCT
CCCATCCCCAAGTCTCACCCTACCGAGGGTAGCTACCACTGGACTTTTGA
GAGATGGCCTCCATCGCGCGCCAGTCTTCTCCCCTCCTCCGGTCGGCGTT
CCGCGCTCCCTTCGCGACTAAGAATGTCGCGCAGGTCGTGGCTTTTCATG
CTTCCGCTAAGAAGCAGATCTTGCCTCCTTTGCCTCCGCCTCCATCACCG
ACTACTTCCCTACTCGCCGTGTCCCCAAGACCCACACCTTCATGATCTGG
CTGCTCCGCGCGTTCACCCTCAGCACGGCTGTCGGTCTGTACGAGTTCGA
GACGAACGACGTCGGTGTCACGGAGGCTCTCCGCCGGGTGTGGAACGCAT
AGAATCGTCTCTGCCGGTCTCGTCCCTCTCTGCATTGCTCCCTTCGCTGC
TGGCTCCATGAGCCCCGTCATGGACGCCGTCATCTGCTCCGCTATCGTCG
TTCACTCGCACATTGGTTTCCATGAACGACCCCGCTCCCATCCCCAAGTC
TCACCCTACCGAGGGTAGCTACCACTGGACTTTTGAGAGATGGCCTCCAT
CGCGCGCCAGTCTTCTCCCCTCCTCCGGTCGGCGTTCCGCGCTCCCTTCG
CGACTAAGAATGTCGCGCAGGTCGTGGCTTTTCATGCTTCCGCTAAGAAG
CAGATCTTGCCTCCTTTGCCTCCGCCTCCATCACCGACTACTTCCCTACT
CGCCGTGTCCCCAAGACCCACACCTTCATGATCTGGCTGCTCCGCGCGTT
CACCCTCAGCACGGCTGTCGGTCTGTACGAGTTCGAGACGAACGACGTCG
GTGTCACGGAGGCTCTCCGCCGGGTGTGGAACGCATAGAATCGTCTCTGC
CGGTCTCGTCCCTCTCTGCATTGCTCCCTTCGCTGCTGGCTCCATGAGCC
CCGTCATGGACGCCGTCATCTGCTCCGCTATCGTCGTTCACTCGCACATT
GGTTTCCATGAACGACCCCGCTCCCATCCCCAAGTCTCACCCTACCGAGG
GTAGCTACCACTGGACTTTTGAGAGATGGCCTCCATCGCGCGCCAGTCTT
CTCCCCTCCTCCGGTCGGCGTTCCGCGCTCCCTTCGCGACTAAGAATGTC
GCGCAGGTCGTGGCTTTTCATGCTTCCGCTAAGAAGCAGATCTTGCCTCC
TTTGCCTCCGCCTCCATCACCGACTACTTCCCTACTCGCCGTGTCCCCAA
GACCCACACCTTCATGATCTGGCTGCTCCGCGCGTTCACCCTCAGCACGG
CTGTCGGTCTGTACGAGTTCGAGACGAACGACGTCGGTGTCACGGAGGCT
CTCCGCCGGGTGTGGAACGCATAGAATCGTCTCTGCCGGTCTCGTCCCTC
TCTGCATTGCTCCCTTCGCTGCTGGCTCCATGAGCCCCGTCATGGACGCC
GTCATCTGCTCCGCTATCGTCGTTCACTCGCACATTGGTTTCCATGAACG
ACCCCGCTCCCATCCCCAAGTCTCACCCTACCGAGGGTAGCTACCACTGG
ACTTTTGAGAGATGGCCTCCATCGCGCGCCAGTCTTCTCCCCTCCTCCGG
TCGGCGTTCCGCGCTCCCTTCGCGACTAAGAATGTCGCGCAGGTCGTGGC
TTTTCATGCTTCCGCTAAGAAGCAGATCTTGCCTCCTTTGCCTC
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
GO:0005740mitochondrial envelope
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_000029ATCC10864_000029Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_000029-T1ATCC10864_000029-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_000029-T1.cdsATCC10864_000029-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_000029-T1.exon4ATCC10864_000029-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_000029-T1.exon3ATCC10864_000029-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_000029-T1.exon2ATCC10864_000029-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_000029-T1.exon1ATCC10864_000029-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR007992
InterProIPR034804
PFAMPF05328
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000006supercontigMCQH01000006:89615..90506 -
Powered by Drupal