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ATCC10864_000078-T1, ATCC10864_000078-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_000078-T1
Unique NameATCC10864_000078-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000006:208243..210088+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_000078-T1 ID=ATCC10864_000078-T1|Name=ATCC10864_000078-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1846bp|location=Sequence derived from alignment at MCQH01000006:208243..210088+ (Aspergillus niger ATCC 10864)
ATGGCATCATTACTCGGCGCAGGCTACGAGTCTAGCGATGATGACTCGGC
CAAGCCCACGCAAGTCCAACCTACGGTGCCCTCAGCGACTACGATCGTCG
CGGCGCCTGAAGTGAACACAGAGGTTTGGTCCCCCAGTTTCTTTTGAATT
AGCTGCTGAGCATTGATCCCCTATTATCTCTAATTTGGTATGTCTGGTGT
ATCTAACAAACCTACAGGACCAAGCGCATATGCAGATGATGCTCGCTAAC
ACCTCATCCACCGCGTTGACCTACAACGCTACCTACGATGATCTCTCGCG
GCCGTCTCAAGGCCCCGCCAACCCCTTCAAACCTGCCGGACCAGCGAATG
GTCTCAAGCGCAAGAATGTCCCGACCGGTTTCGCCGAAGAAGCAGCCATC
AGTGAGGCGACCTTCGCCGCGCAACACCGCACCTTCCAGAGTCTAGGCTA
CACGCGCAACCCTGGTCTCCCGGGTCAATTTGTCGGCAATCTTGATAACG
CAGCTCAATTCGGTGGCCGCGATGTCATCCAGATGAAACCCTCCAAGGAG
GCATCTGCAGCGCTGCGCGCGAAACGGCAGAAGAAGGGCGACCCCAGCAT
CGTGGAAGGTGAAGGTGCCTACCTCGGCCCATGGGCGAAATACCAACGCG
AGGAGGTTTACGAAGAGGAGGCCGCCGAAGAGGACCGCGAACTTGCTAGC
GATGAGGAATACGTTGAGGTCGATGAAGAGGAAGACCTGGCACCATCGGC
CATGCCTGCCATGAGCAAAGAAGCCACCGACTACCAAGACGACACGACCA
AGGTCGAATCCACCGAATTCCACGGCACAGAGCAGTTCGACTACCTGGGC
CGCACGTACATGCACGTTCCTCAAGATCTGGACATCGACCTCCGCAAAGA
CCCCGGCAGCGCCAAGAACTTCATCCCCAAGAAACTCATCCATACCTGGA
AATCGCACACCAAAGCCATCACCTCGCTCCGCTTCTTCCCCCGCTCCGGC
CACCTCCTCCTCTCCTCCGCCGCCGACGGCAAAGCCAAGATTTGGGACGC
CTACCACTCACGCGAACTGCTGCGCACCTTCTCCGGCCACTCCAAGGCCA
TCACGGACACCGACTTCCACCCCAGCGGCACCACCTTCCTCACAGCCTCC
TACGACCGCCAAATCAAGCTCTGGGACACCGAATACGGCAAATGTCTCGG
ACGTTTCAGCACAGGCAAGACCCCCCATGTCATCCGCTTCAACCCCGGCG
CCGAACACTCGCACGAGTTCCTGGCCGGTATGTCCGACAAGAAGATCGTG
CAATTCGACACCCGCTCCGGCGAACTGGTCCAAGAATACGACCACCACTT
GGCAGCCATCAACACCATCACCTTTGTCGACGACAACCGCCGCTTCATCT
CCACCTCCGACGACAAATCCCTCCGCGCCTGGGAATACGGCATCCCCGTA
CCTATCAAATTCATCGCCGAACCATACATGTTCGCCCTCACCCGCGCCAC
CCCCCACCCCAACGGCAAATACGTCGCCTTCCAATCCGGCGATAACCAGA
TCGTCGTGTACGGCGCCACGGACAAATTCCGCCAGAACCGGAAGAAGAGT
TTCCGTGGCCACAACAATGCCGGCTACGCCATTGATATCAAGATCTCCCC
AGATGGACAGTTCATTGCTTCCGGTGATAGTGGCGGCTATGTCTGCTTCT
GGGATTGGAAAACAGGAAAAATGTACCATAAGATCCTGGCTGGTGGGAAG
GAAGGTGGCGCGACTACTTGTCTGGATTGGCATCCCCAGGAAACTAGCAA
GGTTGTTACGGGTGGGTTGGATGGGTTGATTAAATATTGGGATTAG
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Coding sequence (CDS) from alignment at MCQH01000006:208243..210088+

>ATCC10864_000078-T1 ID=ATCC10864_000078-T1|Name=ATCC10864_000078-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3504bp|location=Sequence derived from alignment at MCQH01000006:208243..210088+ (Aspergillus niger ATCC 10864)
ATGGCATCATTACTCGGCGCAGGCTACGAGTCTAGCGATGATGACTCGGC
CAAGCCCACGCAAGTCCAACCTACGGTGCCCTCAGCGACTACGATCGTCG
CGGCGCCTGAAGTGAACACAGAGGACCAAGCGCATATGCAGATGATGCTC
GCTAACACCTCATCCACCGCGTTGACCTACAACGCTACCTACGATGATCT
CTCGCGGCCGTCTCAAGGCCCCGCCAACCCCTTCAAACCTGCCGGACCAG
CGAATGGTCTCAAGCGCAAGAATGTCCCGACCGGTTTCGCCGAAGAAGCA
GCCATCAGTGAGGCGACCTTCGCCGCGCAACACCGCACCTTCCAGAGTCT
AGGCTACACGCGCAACCCTGGTCTCCCGGGTCAATTTGTCGGCAATCTTG
ATAACGCAGCTCAATTCGGTGGCCGCGATGTCATCCAGATGAAACCCTCC
AAGGAGGCATCTGCAGCGCTGCGCGCGAAACGGCAGAAGAAGGGCGACCC
CAGCATCGTGGAAGGTGAAGGTGCCTACCTCGGCCCATGGGCGAAATACC
AACGCGAGGAGGTTTACGAAGAGGAGGCCGCCGAAGAGGACCGCGAACTT
GCTAGCGATGAGGAATACGTTGAGGTCGATGAAGAGGAAGACCTGGCACC
ATCGGCCATGCCTGCCATGAGCAAAGAAGCCACCGACTACCAAGACGACA
CGACCAAGGTCGAATCCACCGAATTCCACGGCACAGAGCAGTTCGACTAC
CTGGGCCGCACGTACATGCACGTTCCTCAAGATCTGGACATCGACCTCCG
CAAAGACCCCGGCAGCGCCAAGAACTTCATCCCCAAGAAACTCATCCATA
CCTGGAAATCGCACACCAAAGCCATCACCTCGCTCCGCTTCTTCCCCCGC
TCCGGCCACCTCCTCCTCTCCTCCGCCGCCGACGGCAAAGCCAAGATTTG
GGACGCCTACCACTCACGCGAACTGCTGCGCACCTTCTCCGGCCACTCCA
AGGCCATCACGGACACCGACTTCCACCCCAGCGGCACCACCTTCCTCACA
GCCTCCTACGACCGCCAAATCAAGCTCTGGGACACCGAATACGGCAAATG
TCTCGGACGTTTCAGCACAGGCAAGACCCCCCATGTCATCCGCTTCAACC
CCGGCGCCGAACACTCGCACGAGTTCCTGGCCGGTATGTCCGACAAGAAG
ATCGTGCAATTCGACACCCGCTCCGGCGAACTGGTCCAAGAATACGACCA
CCACTTGGCAGCCATCAACACCATCACCTTTGTCGACGACAACCGCCGCT
TCATCTCCACCTCCGACGACAAATCCCTCCGCGCCTGGGAATACGGCATC
CCCGTACCTATCAAATTCATCGCCGAACCATACATGTTCGCCCTCACCCG
CGCCACCCCCCACCCCAACGGCAAATACGTCGCCTTCCAATCCGGCGATA
ACCAGATCGTCGTGTACGGCGCCACGGACAAATTCCGCCAGAACCGGAAG
AAGAGTTTCCGTGGCCACAACAATGCCGGCTACGCCATTGATATCAAGAT
CTCCCCAGATGGACAGTTCATTGCTTCCGGTGATAGTGGCGGCTATGTCT
GCTTCTGGGATTGGAAAACAGGAAAAATGTACCATAAGATCCTGGCTGGT
GGGAAGGAAGGTGGCGCGACTACTTGTCTGGATTGGCATCCCCAGGAAAC
TAGCAAGGTTGTTACGGGTGGGTTGGATGGGTTGATTAAATATTGGGATT
AGATGGCATCATTACTCGGCGCAGGCTACGAGTCTAGCGATGATGACTCG
GCCAAGCCCACGCAAGTCCAACCTACGGTGCCCTCAGCGACTACGATCGT
CGCGGCGCCTGAAGTGAACACAGAGGACCAAGCGCATATGCAGATGATGC
TCGCTAACACCTCATCCACCGCGTTGACCTACAACGCTACCTACGATGAT
CTCTCGCGGCCGTCTCAAGGCCCCGCCAACCCCTTCAAACCTGCCGGACC
AGCGAATGGTCTCAAGCGCAAGAATGTCCCGACCGGTTTCGCCGAAGAAG
CAGCCATCAGTGAGGCGACCTTCGCCGCGCAACACCGCACCTTCCAGAGT
CTAGGCTACACGCGCAACCCTGGTCTCCCGGGTCAATTTGTCGGCAATCT
TGATAACGCAGCTCAATTCGGTGGCCGCGATGTCATCCAGATGAAACCCT
CCAAGGAGGCATCTGCAGCGCTGCGCGCGAAACGGCAGAAGAAGGGCGAC
CCCAGCATCGTGGAAGGTGAAGGTGCCTACCTCGGCCCATGGGCGAAATA
CCAACGCGAGGAGGTTTACGAAGAGGAGGCCGCCGAAGAGGACCGCGAAC
TTGCTAGCGATGAGGAATACGTTGAGGTCGATGAAGAGGAAGACCTGGCA
CCATCGGCCATGCCTGCCATGAGCAAAGAAGCCACCGACTACCAAGACGA
CACGACCAAGGTCGAATCCACCGAATTCCACGGCACAGAGCAGTTCGACT
ACCTGGGCCGCACGTACATGCACGTTCCTCAAGATCTGGACATCGACCTC
CGCAAAGACCCCGGCAGCGCCAAGAACTTCATCCCCAAGAAACTCATCCA
TACCTGGAAATCGCACACCAAAGCCATCACCTCGCTCCGCTTCTTCCCCC
GCTCCGGCCACCTCCTCCTCTCCTCCGCCGCCGACGGCAAAGCCAAGATT
TGGGACGCCTACCACTCACGCGAACTGCTGCGCACCTTCTCCGGCCACTC
CAAGGCCATCACGGACACCGACTTCCACCCCAGCGGCACCACCTTCCTCA
CAGCCTCCTACGACCGCCAAATCAAGCTCTGGGACACCGAATACGGCAAA
TGTCTCGGACGTTTCAGCACAGGCAAGACCCCCCATGTCATCCGCTTCAA
CCCCGGCGCCGAACACTCGCACGAGTTCCTGGCCGGTATGTCCGACAAGA
AGATCGTGCAATTCGACACCCGCTCCGGCGAACTGGTCCAAGAATACGAC
CACCACTTGGCAGCCATCAACACCATCACCTTTGTCGACGACAACCGCCG
CTTCATCTCCACCTCCGACGACAAATCCCTCCGCGCCTGGGAATACGGCA
TCCCCGTACCTATCAAATTCATCGCCGAACCATACATGTTCGCCCTCACC
CGCGCCACCCCCCACCCCAACGGCAAATACGTCGCCTTCCAATCCGGCGA
TAACCAGATCGTCGTGTACGGCGCCACGGACAAATTCCGCCAGAACCGGA
AGAAGAGTTTCCGTGGCCACAACAATGCCGGCTACGCCATTGATATCAAG
ATCTCCCCAGATGGACAGTTCATTGCTTCCGGTGATAGTGGCGGCTATGT
CTGCTTCTGGGATTGGAAAACAGGAAAAATGTACCATAAGATCCTGGCTG
GTGGGAAGGAAGGTGGCGCGACTACTTGTCTGGATTGGCATCCCCAGGAA
ACTAGCAAGGTTGTTACGGGTGGGTTGGATGGGTTGATTAAATATTGGGA
TTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0000398mRNA splicing, via spliceosome
Vocabulary: Cellular Component
TermDefinition
GO:0071013catalytic step 2 spliceosome
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_000078ATCC10864_000078Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_000078-T1.exon1ATCC10864_000078-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_000078-T1.exon2ATCC10864_000078-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_000078-T1.cdsATCC10864_000078-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_000078-T1ATCC10864_000078-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR015943
InterProIPR032847
InterProIPR017986
InterProIPR019775
InterProIPR001680
InterProIPR036322
PFAMPF12894
InterProIPR020472
PFAMPF00400
Properties
Property NameValue
NoteBUSCO:EOG09262A6N
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000006supercontigMCQH01000006:208243..210088 +
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