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ATCC10864_000089-T1, ATCC10864_000089-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_000089-T1
Unique NameATCC10864_000089-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000006:241125..242503+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_000089-T1 ID=ATCC10864_000089-T1|Name=ATCC10864_000089-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1379bp|location=Sequence derived from alignment at MCQH01000006:241125..242503+ (Aspergillus niger ATCC 10864)
ATGACTGCTGCGCTTGTGAATCAGCCGGCCTGGGAGGAACGGAAACAGGC
ACCCGCGGAGATGGACGACGATCCCCAGACGTCTTTATCGGAAACAACTT
CCAACAATGCCAGAGAAATCAGCGCTCCATTTTTAGAGCTTCCCCCTGAG
CTAGTCCAGCAAATATTGTCATATTTATCGGCTCAAGATCTCGCTCGCCT
GTCAACCACCTGCCGCACTTTCGCTGAGCATGCGACCAACGAGCTTTTGT
GGGCCAATATCATCAACTCCAATCTTCCTGAGCCCATACACACACCAGGT
GTCTTTGACTCCTTTCGCAGTCTCTACATCGCCCACCATCCTTGCTGGTT
TATTCCTCGCAACAAAATCTGGTTTTCGGACACTGAGCACACGGGCAATT
TAATCCTCGCCCGCTATGATCACCGACGGGGCGTCATAGAGGCTTACCGA
GTCATTGCAGAACGTCGCTCGCACCAATTTCAACTTTGGGACTGGAACCC
AGATGTTATTATCCAAACGTTCAATCCTAAAGTCAGTCTGTGGCTAGATG
ATCCAGTCCTGCTCCTTAAAAACCACCACGAGGGACGGCCGTTATATTTA
CGCGGTGAGACCCGCATGCCTATGCCCCTCGAGACGCAGCATGTCTTCAA
CTCGTTTTCGCTTTGTTCCACCCGAATGACATCTGATGTTGTGGCGAACA
AACAATGGCCTCCAATAACCATTCCAACCAAACACCGCGTCTATCGCGGT
GAAGTTGACCCGGAGTGGGAACACCACCCCCCACAGCTGGACAGAATTTC
TGAGCATGCGTTTCGAATTAGAAGATGGGCACATTTCCGATTGGGCATGC
CGATCTTCACCGCTGGCCGGAGCGAGACGCTGTCGACTTATGCTACACTT
GACTCGGAGCTGTATACGCCCACGGACAAGAAACCATACCAAGGCATTTG
GGTTGGAGACTACTCAGCACATGGATGTGAATTTCTGCTTTTCCTACAAC
GTGATCAAGGGGAAGGGCGATGCAGCCTTGAGGCTATCAAGCTCACTGGA
GACCCTAACGTTCCCCGTGGCGAAATATCGTTCTCAGCAGACGACATTGG
CCCAGGAGGATTTGTTCGCATTGCGGAGGAAGCTCTCTTTCAAGGAGCAC
GCATAGTAAGGAGCAAAGGCCATGTAGCGGGCCTCGGTTTTAGAGATGGT
AAGTTTGATCGGAAAAGTGGCCGGACATCTCGCTTTGCAAACTAACCTGG
TTCTTAGATACGTTTATCGCATCCCAACTCATTCTGATTTCGCCAGAGTG
CGTGGCGCACTATTGGGAAACTATGGGCCATATCTCCTATTACCGTCGTC
TGGACATCGATGCATTACTCCGGACATAG
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Coding sequence (CDS) from alignment at MCQH01000006:241125..242503+

>ATCC10864_000089-T1 ID=ATCC10864_000089-T1|Name=ATCC10864_000089-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2640bp|location=Sequence derived from alignment at MCQH01000006:241125..242503+ (Aspergillus niger ATCC 10864)
ATGACTGCTGCGCTTGTGAATCAGCCGGCCTGGGAGGAACGGAAACAGGC
ACCCGCGGAGATGGACGACGATCCCCAGACGTCTTTATCGGAAACAACTT
CCAACAATGCCAGAGAAATCAGCGCTCCATTTTTAGAGCTTCCCCCTGAG
CTAGTCCAGCAAATATTGTCATATTTATCGGCTCAAGATCTCGCTCGCCT
GTCAACCACCTGCCGCACTTTCGCTGAGCATGCGACCAACGAGCTTTTGT
GGGCCAATATCATCAACTCCAATCTTCCTGAGCCCATACACACACCAGGT
GTCTTTGACTCCTTTCGCAGTCTCTACATCGCCCACCATCCTTGCTGGTT
TATTCCTCGCAACAAAATCTGGTTTTCGGACACTGAGCACACGGGCAATT
TAATCCTCGCCCGCTATGATCACCGACGGGGCGTCATAGAGGCTTACCGA
GTCATTGCAGAACGTCGCTCGCACCAATTTCAACTTTGGGACTGGAACCC
AGATGTTATTATCCAAACGTTCAATCCTAAAGTCAGTCTGTGGCTAGATG
ATCCAGTCCTGCTCCTTAAAAACCACCACGAGGGACGGCCGTTATATTTA
CGCGGTGAGACCCGCATGCCTATGCCCCTCGAGACGCAGCATGTCTTCAA
CTCGTTTTCGCTTTGTTCCACCCGAATGACATCTGATGTTGTGGCGAACA
AACAATGGCCTCCAATAACCATTCCAACCAAACACCGCGTCTATCGCGGT
GAAGTTGACCCGGAGTGGGAACACCACCCCCCACAGCTGGACAGAATTTC
TGAGCATGCGTTTCGAATTAGAAGATGGGCACATTTCCGATTGGGCATGC
CGATCTTCACCGCTGGCCGGAGCGAGACGCTGTCGACTTATGCTACACTT
GACTCGGAGCTGTATACGCCCACGGACAAGAAACCATACCAAGGCATTTG
GGTTGGAGACTACTCAGCACATGGATGTGAATTTCTGCTTTTCCTACAAC
GTGATCAAGGGGAAGGGCGATGCAGCCTTGAGGCTATCAAGCTCACTGGA
GACCCTAACGTTCCCCGTGGCGAAATATCGTTCTCAGCAGACGACATTGG
CCCAGGAGGATTTGTTCGCATTGCGGAGGAAGCTCTCTTTCAAGGAGCAC
GCATAGTAAGGAGCAAAGGCCATGTAGCGGGCCTCGGTTTTAGAGATGAT
ACGTTTATCGCATCCCAACTCATTCTGATTTCGCCAGAGTGCGTGGCGCA
CTATTGGGAAACTATGGGCCATATCTCCTATTACCGTCGTCTGGACATCG
ATGCATTACTCCGGACATAGATGACTGCTGCGCTTGTGAATCAGCCGGCC
TGGGAGGAACGGAAACAGGCACCCGCGGAGATGGACGACGATCCCCAGAC
GTCTTTATCGGAAACAACTTCCAACAATGCCAGAGAAATCAGCGCTCCAT
TTTTAGAGCTTCCCCCTGAGCTAGTCCAGCAAATATTGTCATATTTATCG
GCTCAAGATCTCGCTCGCCTGTCAACCACCTGCCGCACTTTCGCTGAGCA
TGCGACCAACGAGCTTTTGTGGGCCAATATCATCAACTCCAATCTTCCTG
AGCCCATACACACACCAGGTGTCTTTGACTCCTTTCGCAGTCTCTACATC
GCCCACCATCCTTGCTGGTTTATTCCTCGCAACAAAATCTGGTTTTCGGA
CACTGAGCACACGGGCAATTTAATCCTCGCCCGCTATGATCACCGACGGG
GCGTCATAGAGGCTTACCGAGTCATTGCAGAACGTCGCTCGCACCAATTT
CAACTTTGGGACTGGAACCCAGATGTTATTATCCAAACGTTCAATCCTAA
AGTCAGTCTGTGGCTAGATGATCCAGTCCTGCTCCTTAAAAACCACCACG
AGGGACGGCCGTTATATTTACGCGGTGAGACCCGCATGCCTATGCCCCTC
GAGACGCAGCATGTCTTCAACTCGTTTTCGCTTTGTTCCACCCGAATGAC
ATCTGATGTTGTGGCGAACAAACAATGGCCTCCAATAACCATTCCAACCA
AACACCGCGTCTATCGCGGTGAAGTTGACCCGGAGTGGGAACACCACCCC
CCACAGCTGGACAGAATTTCTGAGCATGCGTTTCGAATTAGAAGATGGGC
ACATTTCCGATTGGGCATGCCGATCTTCACCGCTGGCCGGAGCGAGACGC
TGTCGACTTATGCTACACTTGACTCGGAGCTGTATACGCCCACGGACAAG
AAACCATACCAAGGCATTTGGGTTGGAGACTACTCAGCACATGGATGTGA
ATTTCTGCTTTTCCTACAACGTGATCAAGGGGAAGGGCGATGCAGCCTTG
AGGCTATCAAGCTCACTGGAGACCCTAACGTTCCCCGTGGCGAAATATCG
TTCTCAGCAGACGACATTGGCCCAGGAGGATTTGTTCGCATTGCGGAGGA
AGCTCTCTTTCAAGGAGCACGCATAGTAAGGAGCAAAGGCCATGTAGCGG
GCCTCGGTTTTAGAGATGATACGTTTATCGCATCCCAACTCATTCTGATT
TCGCCAGAGTGCGTGGCGCACTATTGGGAAACTATGGGCCATATCTCCTA
TTACCGTCGTCTGGACATCGATGCATTACTCCGGACATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0019005SCF ubiquitin ligase complex
Vocabulary: Biological Process
TermDefinition
GO:0006974cellular response to DNA damage stimulus
GO:0031571mitotic G1 DNA damage checkpoint
GO:0031146SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0030332cyclin binding
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_000089ATCC10864_000089Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_000089-T1.exon1ATCC10864_000089-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_000089-T1.exon2ATCC10864_000089-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_000089-T1.cdsATCC10864_000089-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_000089-T1ATCC10864_000089-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR026941
PFAMPF12014
PFAMPF00646
PFAMPF12937
InterProIPR036047
InterProIPR021894
InterProIPR001810
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000006supercontigMCQH01000006:241125..242503 +
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