You are here

Home

ATCC10864_000208-T1, ATCC10864_000208-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_000208-T1
Unique NameATCC10864_000208-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000006:569359..571515+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_000208-T1 ID=ATCC10864_000208-T1|Name=ATCC10864_000208-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=2157bp|location=Sequence derived from alignment at MCQH01000006:569359..571515+ (Aspergillus niger ATCC 10864)
ATGGATCCGGCAAACGAATATTGCGGGCTTGAAGACTATGGCCTGGTGGG
GGACATGCACACCTGTGCGCTGGTCAGCAAGAATGGCAGCGTCGACTCCA
TGTGCTGGCCCGTGTTCGATTCCCCTTCCATCTTCTGCCGCATTCTCGAC
AAGGAGAAAGGAGGCCATTTTTCGATAACCCCAGATCGCAGATTGAAGAA
TCCTCTCAGTAAGCAGCGCTATCGTCCGTATACCAATATGCTGGAGACAC
GCTGGATCCATGAGGAGGGTGTGATGAACATCTTGGATTACTTTCCGATC
GCAAAACCCAAGCCCCATGTGGTCGAGAAAGGCCTTCCCCAGTGGTGTCG
ATGCTACCAGAACAAAGGCTCTGCACAATATCAGGCATGTCGTTCCGGGA
TGGTACGGAAAGCAGAGTGCGTGCGTGGTGAAATGGAGATAGAAATTGAG
CTCTTCCCGGCATTCAACTACGCTCGCGATTCACATGTAGCCCAACAGTC
TTCGGCTTCGGATGACGCTATCCAAGTTTACCACTTTCAGGCTGAGAGTC
AGAATCTGGTTGTCAGCGTTCTGGGAGACAGGGGTGATATTTCCGGGGAT
GACTCCGATCTTAGCATTGAATTTGAACTGTCCGATCGACCCGGCCATTT
AGGCCCCGGTCTGGTTGGGAAGGTTACCTTGAAAGAAGGACAGTCTATTA
CTATGCTTCTTCACGACCAGGAATCCATAACATGCAATGTGGAGGATCTA
GCGCCCTATCTACAGCAGATTGAGCGAACAACAGGCGATTTCTGGTCAGA
CTGGACCAGCAAGTGCACCTTTCGAGGCCACTACCGTGAGCAAGTAGAAC
GCAGCCTACTTGTTCTTAAGCTGCTAACCTACAAGCCAACTGGAGCGATC
GTGGCAGCCCCCACGTTCTCCCTGCCCGAGCATATCGGCGGAAGTCGCAA
CTGGGACTATCGCTATTCATGGGTGCGAGATGCAGCATTCACCGTGTATG
TGTTCTTGAAGAACGGCTATCCCGAAGAAGCCGAATCGTACATCAACTTC
ATCTTCGAACGCATCTTCCCACCCATGGATAAGAATCCAAAGCCAGGGGA
GCCCTTCCTGCCCATCATGATTACCATTCATGGCGAGCGCGAGATCCCCG
AAATGGAACTCGAACATCTTGAGGGGTACCGAGGAAGCCGACCAGTTCGT
ATCGGCAATGGTGCAGCGACTCATATTCAGCTCGACATTTACGGAGAACT
AATGGACAGCATATACCTCTACAACAAACATGCCGCCGACATATCATACG
ACCAATGGCGAGCTATTCGTCGCATGATCGACTTCGTCATCCAGATCCGT
CATCAACCCGACCAGTCCATCTGGGAAGTGCGCGGGCCTCCGCAAAACTT
TGTCTACTCTAAAATCATGCTTTGGGTGGCTTTGGATCGTGGCTTACGGC
TGGCGGAGAAGAGATCCAATCTGCCATGTCCGGACCGGGCACGATGGATG
CACGAACGCGATGCACTGTACGATGAAATCATGACCAAGGGATATAACTC
CGAGAAGGGATTTTTCTGCATGAGCTATGAAAATCAGGATGCTATGGACG
CTGCAGTGCTTATCGCGCCGTTGGTATTTTTCGTAGCGCCGAATGATCCC
CGCTTGTTGAGCACCATCCAGAAGATCACCGAGGTTCCGGCAAAAGGAGG
TCTGAGTGTGGCTAATATGGTGTCACGTTATGATACTGGGAAAGTCGACG
ACGGTAAGCTATCCCCTGCCTACCTTAATGACGACACACTCTAAACGCAT
TATCAGGTGTTGGCGGCAACGAAGGCGCTTTCCTGATGGTTACATTCTGG
CTCGTCGAAGCCATGATGCGTGTAAGTTCTAACACTCAGCCTCCTTGTTA
CCCTATTCTCGACAGCTAACAGATATTGTCAGGCCGCCCGATCCAAAGCG
TATCTTCCTCACGACCCATTCTTCCAGCAACTGCGCAAGACAGCGACATC
GCAGTTCGACAGCATTCTCTCTTTTGCAAATCATCTGGGGATGTTCTCCG
AGGAGGTGGCGACGTCCGGCGAGCAGATCGGCAACATGCCGCAGGCATTC
AGTCACCTTGCGTGTGTGAGTGCGGCGATGAATCTGGGCGGAGGGGGCGA
CAGATAA
back to top

Coding sequence (CDS) from alignment at MCQH01000006:569359..571515+

>ATCC10864_000208-T1 ID=ATCC10864_000208-T1|Name=ATCC10864_000208-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=6129bp|location=Sequence derived from alignment at MCQH01000006:569359..571515+ (Aspergillus niger ATCC 10864)
ATGGATCCGGCAAACGAATATTGCGGGCTTGAAGACTATGGCCTGGTGGG
GGACATGCACACCTGTGCGCTGGTCAGCAAGAATGGCAGCGTCGACTCCA
TGTGCTGGCCCGTGTTCGATTCCCCTTCCATCTTCTGCCGCATTCTCGAC
AAGGAGAAAGGAGGCCATTTTTCGATAACCCCAGATCGCAGATTGAAGAA
TCCTCTCAGTAAGCAGCGCTATCGTCCGTATACCAATATGCTGGAGACAC
GCTGGATCCATGAGGAGGGTGTGATGAACATCTTGGATTACTTTCCGATC
GCAAAACCCAAGCCCCATGTGGTCGAGAAAGGCCTTCCCCAGTGGTGTCG
ATGCTACCAGAACAAAGGCTCTGCACAATATCAGGCATGTCGTTCCGGGA
TGGTACGGAAAGCAGAGTGCGTGCGTGGTGAAATGGAGATAGAAATTGAG
CTCTTCCCGGCATTCAACTACGCTCGCGATTCACATGTAGCCCAACAGTC
TTCGGCTTCGGATGACGCTATCCAAGTTTACCACTTTCAGGCTGAGAGTC
AGAATCTGGTTGTCAGCGTTCTGGGAGACAGGGGTGATATTTCCGGGGAT
GACTCCGATCTTAGCATTGAATTTGAACTGTCCGATCGACCCGGCCATTT
AGGCCCCGGTCTGGTTGGGAAGGTTACCTTGAAAGAAGGACAGTCTATTA
CTATGCTTCTTCACGACCAGGAATCCATAACATGCAATGTGGAGGATCTA
GCGCCCTATCTACAGCAGATTGAGCGAACAACAGGCGATTTCTGGTCAGA
CTGGACCAGCAAGTGCACCTTTCGAGGCCACTACCGTGAGCAAGTAGAAC
GCAGCCTACTTGTTCTTAAGCTGCTAACCTACAAGCCAACTGGAGCGATC
GTGGCAGCCCCCACGTTCTCCCTGCCCGAGCATATCGGCGGAAGTCGCAA
CTGGGACTATCGCTATTCATGGGTGCGAGATGCAGCATTCACCGTGTATG
TGTTCTTGAAGAACGGCTATCCCGAAGAAGCCGAATCGTACATCAACTTC
ATCTTCGAACGCATCTTCCCACCCATGGATAAGAATCCAAAGCCAGGGGA
GCCCTTCCTGCCCATCATGATTACCATTCATGGCGAGCGCGAGATCCCCG
AAATGGAACTCGAACATCTTGAGGGGTACCGAGGAAGCCGACCAGTTCGT
ATCGGCAATGGTGCAGCGACTCATATTCAGCTCGACATTTACGGAGAACT
AATGGACAGCATATACCTCTACAACAAACATGCCGCCGACATATCATACG
ACCAATGGCGAGCTATTCGTCGCATGATCGACTTCGTCATCCAGATCCGT
CATCAACCCGACCAGTCCATCTGGGAAGTGCGCGGGCCTCCGCAAAACTT
TGTCTACTCTAAAATCATGCTTTGGGTGGCTTTGGATCGTGGCTTACGGC
TGGCGGAGAAGAGATCCAATCTGCCATGTCCGGACCGGGCACGATGGATG
CACGAACGCGATGCACTGTACGATGAAATCATGACCAAGGGATATAACTC
CGAGAAGGGATTTTTCTGCATGAGCTATGAAAATCAGGATGCTATGGACG
CTGCAGTGCTTATCGCGCCGTTGGTATTTTTCGTAGCGCCGAATGATCCC
CGCTTGTTGAGCACCATCCAGAAGATCACCGAGGTTCCGGCAAAAGGAGG
TCTGAGTGTGGCTAATATGGTGTCACGTTATGATACTGGGAAAGTCGACG
ACGGTGTTGGCGGCAACGAAGGCGCTTTCCTGATGGTTACATTCTGGCTC
GTCGAAGCCATGATGCGTGCCGCCCGATCCAAAGCGTATCTTCCTCACGA
CCCATTCTTCCAGCAACTGCGCAAGACAGCGACATCGCAGTTCGACAGCA
TTCTCTCTTTTGCAAATCATCTGGGGATGTTCTCCGAGGAGGTGGCGACG
TCCGGCGAGCAGATCGGCAACATGCCGCAGGCATTCAGTCACCTTGCGTG
TGTGAGTGCGGCGATGAATCTGGGCGGAGGGGGCGACAGATAAATGGATC
CGGCAAACGAATATTGCGGGCTTGAAGACTATGGCCTGGTGGGGGACATG
CACACCTGTGCGCTGGTCAGCAAGAATGGCAGCGTCGACTCCATGTGCTG
GCCCGTGTTCGATTCCCCTTCCATCTTCTGCCGCATTCTCGACAAGGAGA
AAGGAGGCCATTTTTCGATAACCCCAGATCGCAGATTGAAGAATCCTCTC
AGTAAGCAGCGCTATCGTCCGTATACCAATATGCTGGAGACACGCTGGAT
CCATGAGGAGGGTGTGATGAACATCTTGGATTACTTTCCGATCGCAAAAC
CCAAGCCCCATGTGGTCGAGAAAGGCCTTCCCCAGTGGTGTCGATGCTAC
CAGAACAAAGGCTCTGCACAATATCAGGCATGTCGTTCCGGGATGGTACG
GAAAGCAGAGTGCGTGCGTGGTGAAATGGAGATAGAAATTGAGCTCTTCC
CGGCATTCAACTACGCTCGCGATTCACATGTAGCCCAACAGTCTTCGGCT
TCGGATGACGCTATCCAAGTTTACCACTTTCAGGCTGAGAGTCAGAATCT
GGTTGTCAGCGTTCTGGGAGACAGGGGTGATATTTCCGGGGATGACTCCG
ATCTTAGCATTGAATTTGAACTGTCCGATCGACCCGGCCATTTAGGCCCC
GGTCTGGTTGGGAAGGTTACCTTGAAAGAAGGACAGTCTATTACTATGCT
TCTTCACGACCAGGAATCCATAACATGCAATGTGGAGGATCTAGCGCCCT
ATCTACAGCAGATTGAGCGAACAACAGGCGATTTCTGGTCAGACTGGACC
AGCAAGTGCACCTTTCGAGGCCACTACCGTGAGCAAGTAGAACGCAGCCT
ACTTGTTCTTAAGCTGCTAACCTACAAGCCAACTGGAGCGATCGTGGCAG
CCCCCACGTTCTCCCTGCCCGAGCATATCGGCGGAAGTCGCAACTGGGAC
TATCGCTATTCATGGGTGCGAGATGCAGCATTCACCGTGTATGTGTTCTT
GAAGAACGGCTATCCCGAAGAAGCCGAATCGTACATCAACTTCATCTTCG
AACGCATCTTCCCACCCATGGATAAGAATCCAAAGCCAGGGGAGCCCTTC
CTGCCCATCATGATTACCATTCATGGCGAGCGCGAGATCCCCGAAATGGA
ACTCGAACATCTTGAGGGGTACCGAGGAAGCCGACCAGTTCGTATCGGCA
ATGGTGCAGCGACTCATATTCAGCTCGACATTTACGGAGAACTAATGGAC
AGCATATACCTCTACAACAAACATGCCGCCGACATATCATACGACCAATG
GCGAGCTATTCGTCGCATGATCGACTTCGTCATCCAGATCCGTCATCAAC
CCGACCAGTCCATCTGGGAAGTGCGCGGGCCTCCGCAAAACTTTGTCTAC
TCTAAAATCATGCTTTGGGTGGCTTTGGATCGTGGCTTACGGCTGGCGGA
GAAGAGATCCAATCTGCCATGTCCGGACCGGGCACGATGGATGCACGAAC
GCGATGCACTGTACGATGAAATCATGACCAAGGGATATAACTCCGAGAAG
GGATTTTTCTGCATGAGCTATGAAAATCAGGATGCTATGGACGCTGCAGT
GCTTATCGCGCCGTTGGTATTTTTCGTAGCGCCGAATGATCCCCGCTTGT
TGAGCACCATCCAGAAGATCACCGAGGTTCCGGCAAAAGGAGGTCTGAGT
GTGGCTAATATGGTGTCACGTTATGATACTGGGAAAGTCGACGACGGTGT
TGGCGGCAACGAAGGCGCTTTCCTGATGGTTACATTCTGGCTCGTCGAAG
CCATGATGCGTGCCGCCCGATCCAAAGCGTATCTTCCTCACGACCCATTC
TTCCAGCAACTGCGCAAGACAGCGACATCGCAGTTCGACAGCATTCTCTC
TTTTGCAAATCATCTGGGGATGTTCTCCGAGGAGGTGGCGACGTCCGGCG
AGCAGATCGGCAACATGCCGCAGGCATTCAGTCACCTTGCGTGTGTGAGT
GCGGCGATGAATCTGGGCGGAGGGGGCGACAGATAAATGGATCCGGCAAA
CGAATATTGCGGGCTTGAAGACTATGGCCTGGTGGGGGACATGCACACCT
GTGCGCTGGTCAGCAAGAATGGCAGCGTCGACTCCATGTGCTGGCCCGTG
TTCGATTCCCCTTCCATCTTCTGCCGCATTCTCGACAAGGAGAAAGGAGG
CCATTTTTCGATAACCCCAGATCGCAGATTGAAGAATCCTCTCAGTAAGC
AGCGCTATCGTCCGTATACCAATATGCTGGAGACACGCTGGATCCATGAG
GAGGGTGTGATGAACATCTTGGATTACTTTCCGATCGCAAAACCCAAGCC
CCATGTGGTCGAGAAAGGCCTTCCCCAGTGGTGTCGATGCTACCAGAACA
AAGGCTCTGCACAATATCAGGCATGTCGTTCCGGGATGGTACGGAAAGCA
GAGTGCGTGCGTGGTGAAATGGAGATAGAAATTGAGCTCTTCCCGGCATT
CAACTACGCTCGCGATTCACATGTAGCCCAACAGTCTTCGGCTTCGGATG
ACGCTATCCAAGTTTACCACTTTCAGGCTGAGAGTCAGAATCTGGTTGTC
AGCGTTCTGGGAGACAGGGGTGATATTTCCGGGGATGACTCCGATCTTAG
CATTGAATTTGAACTGTCCGATCGACCCGGCCATTTAGGCCCCGGTCTGG
TTGGGAAGGTTACCTTGAAAGAAGGACAGTCTATTACTATGCTTCTTCAC
GACCAGGAATCCATAACATGCAATGTGGAGGATCTAGCGCCCTATCTACA
GCAGATTGAGCGAACAACAGGCGATTTCTGGTCAGACTGGACCAGCAAGT
GCACCTTTCGAGGCCACTACCGTGAGCAAGTAGAACGCAGCCTACTTGTT
CTTAAGCTGCTAACCTACAAGCCAACTGGAGCGATCGTGGCAGCCCCCAC
GTTCTCCCTGCCCGAGCATATCGGCGGAAGTCGCAACTGGGACTATCGCT
ATTCATGGGTGCGAGATGCAGCATTCACCGTGTATGTGTTCTTGAAGAAC
GGCTATCCCGAAGAAGCCGAATCGTACATCAACTTCATCTTCGAACGCAT
CTTCCCACCCATGGATAAGAATCCAAAGCCAGGGGAGCCCTTCCTGCCCA
TCATGATTACCATTCATGGCGAGCGCGAGATCCCCGAAATGGAACTCGAA
CATCTTGAGGGGTACCGAGGAAGCCGACCAGTTCGTATCGGCAATGGTGC
AGCGACTCATATTCAGCTCGACATTTACGGAGAACTAATGGACAGCATAT
ACCTCTACAACAAACATGCCGCCGACATATCATACGACCAATGGCGAGCT
ATTCGTCGCATGATCGACTTCGTCATCCAGATCCGTCATCAACCCGACCA
GTCCATCTGGGAAGTGCGCGGGCCTCCGCAAAACTTTGTCTACTCTAAAA
TCATGCTTTGGGTGGCTTTGGATCGTGGCTTACGGCTGGCGGAGAAGAGA
TCCAATCTGCCATGTCCGGACCGGGCACGATGGATGCACGAACGCGATGC
ACTGTACGATGAAATCATGACCAAGGGATATAACTCCGAGAAGGGATTTT
TCTGCATGAGCTATGAAAATCAGGATGCTATGGACGCTGCAGTGCTTATC
GCGCCGTTGGTATTTTTCGTAGCGCCGAATGATCCCCGCTTGTTGAGCAC
CATCCAGAAGATCACCGAGGTTCCGGCAAAAGGAGGTCTGAGTGTGGCTA
ATATGGTGTCACGTTATGATACTGGGAAAGTCGACGACGGTGTTGGCGGC
AACGAAGGCGCTTTCCTGATGGTTACATTCTGGCTCGTCGAAGCCATGAT
GCGTGCCGCCCGATCCAAAGCGTATCTTCCTCACGACCCATTCTTCCAGC
AACTGCGCAAGACAGCGACATCGCAGTTCGACAGCATTCTCTCTTTTGCA
AATCATCTGGGGATGTTCTCCGAGGAGGTGGCGACGTCCGGCGAGCAGAT
CGGCAACATGCCGCAGGCATTCAGTCACCTTGCGTGTGTGAGTGCGGCGA
TGAATCTGGGCGGAGGGGGCGACAGATAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_000208ATCC10864_000208Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_000208-T1.exon1ATCC10864_000208-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_000208-T1.exon2ATCC10864_000208-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_000208-T1.exon3ATCC10864_000208-T1.exon3Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_000208-T1.cdsATCC10864_000208-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_000208-T1ATCC10864_000208-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR012341
InterProIPR011613
InterProIPR008928
PFAMPF00723
Properties
Property NameValue
NoteCAZy:GH15
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000006supercontigMCQH01000006:569359..571515 +
Powered by Drupal