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ATCC10864_000228-T1, ATCC10864_000228-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_000228-T1
Unique NameATCC10864_000228-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000006:638791..640311+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_000228-T1 ID=ATCC10864_000228-T1|Name=ATCC10864_000228-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1521bp|location=Sequence derived from alignment at MCQH01000006:638791..640311+ (Aspergillus niger ATCC 10864)
ATGGTCCGCATATGGCCCAAATCTGCCCATGACCAGCCATCGGACCTGGA
AAAAGCGCCTCCTTCGCGCGACCCCGAATACCAGGTGAAATGGGACCCTG
ACGATCCCTTGAATCCGCAAAACTGGCCAGTGCGGTACAAATGGTGGGTG
ACGGTGCAGTTGGGCATGCTCGCCCTGGCCGGTAGTTTGGGCTCCAGCAT
CACCACTTCTGCCGATGACACCATCGCCGAGTATATTGGCGTCAGTAGCG
AGGTCGCTGTTCTCGATGTCTCTCTTTACATGTTAGTGTTTCCGTAGCGA
TCTTGTAAAATATCGACACTGACCAATCCCAGTCTCGGCTTCGTCCTCGG
CCCCATCATCTGGGCTCCCCTCTCCGAAGTCTGGGGTCGGCGCGTCAGCA
TGCTCCCAGCCCTCTTCTGCCTGGCCCTCTTCGACATCGGCACCGCGACC
AGTCGCAACGCCCCTGCCGTCTTCCTGACGCGCTTCTTCGCCGGTTTCTT
TGGCTCCGCGCCCATCAGCAACGTCACCGCTGCCCTCGGCGACATGTGGA
GCAAAGAAACACGAGGCACAGCTGTCAGCATCTACGCGATCGCCGTAAAT
GGCGGTCCAGACCTGGGCCCCATCATCGGCGCGGCCATCATGGCGAACTC
ACATCTCGGCTGGCGCTGGACCGCATACATCCACGCGATCTGGGTCTTCG
CGACCTTTATCATGGCCTTTTTCTTCCTCCCGGAACTCTACCCGCTCGTG
CTGCTGAAACGCAAAGCGCAAAACCTCCGCAAATCCACCAACGACAGCCG
ATACTGGCACCCCCATGAACACCTGCACCTGTCTGTCCAATCTATCGTCA
CGAAACAGCTTGCTCGCCCGCTTCGCATGCTCTGCACTGAACCTATCGTC
ACTTGCATCGCCTTTTACGCCGCCTTCGTCTACGCAGTCATGTACCTCAC
CCTCGAAGTCTTCCCTATCGCCTTCGAAGAACTTCGCGGCTGGTCCCCTG
TCGTCGGGGCGCTGCCCTTCCTCGCTCTCCTGATCGGTGTCATTCTATCC
ACCGGAATCAACATCTACAACCAGTTCCGCTATAACCGCATCTCCGCGGC
CGCGAACGGCGCTCCCGTCCCTGAGGCCAGGTTACCGCCCATGATGTTTG
GCGGTGTTATTCTTGTCCTGGGGCTATTCTGGTTCGCCTGGACAGCTACC
CCCGCTTATCACTGGATCTTGCCGTGCTTGGCAGCGTTCTGTATTGGAGC
AGGGTTCAATTGTATTTTCCAGCAATGTTTGAATTTCCTGATTGACGTGT
ATCGCGTGTATGCAGCTAGTTCAACGGCGGCTGTTACGTTCCTGAGAAGT
ATCATGGCGGCGGGGTTGCCGTTGGCGGCGAAGCCGATGATCAGGGCGTT
GGGGATTGGGCCGGCGATCTCGATTATTGGCGCTGTGGCGGCGGTGTTGT
TGCCCGTGCCGTTTTTGTTTGTGAGGTATGGGCCGGCGTTGAGGAGGGCG
TCGAAAATGATTGATGGGTGA
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Coding sequence (CDS) from alignment at MCQH01000006:638791..640311+

>ATCC10864_000228-T1 ID=ATCC10864_000228-T1|Name=ATCC10864_000228-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2940bp|location=Sequence derived from alignment at MCQH01000006:638791..640311+ (Aspergillus niger ATCC 10864)
ATGGTCCGCATATGGCCCAAATCTGCCCATGACCAGCCATCGGACCTGGA
AAAAGCGCCTCCTTCGCGCGACCCCGAATACCAGGTGAAATGGGACCCTG
ACGATCCCTTGAATCCGCAAAACTGGCCAGTGCGGTACAAATGGTGGGTG
ACGGTGCAGTTGGGCATGCTCGCCCTGGCCGGTAGTTTGGGCTCCAGCAT
CACCACTTCTGCCGATGACACCATCGCCGAGTATATTGGCGTCAGTAGCG
AGGTCGCTGTTCTCGATGTCTCTCTTTACATTCTCGGCTTCGTCCTCGGC
CCCATCATCTGGGCTCCCCTCTCCGAAGTCTGGGGTCGGCGCGTCAGCAT
GCTCCCAGCCCTCTTCTGCCTGGCCCTCTTCGACATCGGCACCGCGACCA
GTCGCAACGCCCCTGCCGTCTTCCTGACGCGCTTCTTCGCCGGTTTCTTT
GGCTCCGCGCCCATCAGCAACGTCACCGCTGCCCTCGGCGACATGTGGAG
CAAAGAAACACGAGGCACAGCTGTCAGCATCTACGCGATCGCCGTAAATG
GCGGTCCAGACCTGGGCCCCATCATCGGCGCGGCCATCATGGCGAACTCA
CATCTCGGCTGGCGCTGGACCGCATACATCCACGCGATCTGGGTCTTCGC
GACCTTTATCATGGCCTTTTTCTTCCTCCCGGAACTCTACCCGCTCGTGC
TGCTGAAACGCAAAGCGCAAAACCTCCGCAAATCCACCAACGACAGCCGA
TACTGGCACCCCCATGAACACCTGCACCTGTCTGTCCAATCTATCGTCAC
GAAACAGCTTGCTCGCCCGCTTCGCATGCTCTGCACTGAACCTATCGTCA
CTTGCATCGCCTTTTACGCCGCCTTCGTCTACGCAGTCATGTACCTCACC
CTCGAAGTCTTCCCTATCGCCTTCGAAGAACTTCGCGGCTGGTCCCCTGT
CGTCGGGGCGCTGCCCTTCCTCGCTCTCCTGATCGGTGTCATTCTATCCA
CCGGAATCAACATCTACAACCAGTTCCGCTATAACCGCATCTCCGCGGCC
GCGAACGGCGCTCCCGTCCCTGAGGCCAGGTTACCGCCCATGATGTTTGG
CGGTGTTATTCTTGTCCTGGGGCTATTCTGGTTCGCCTGGACAGCTACCC
CCGCTTATCACTGGATCTTGCCGTGCTTGGCAGCGTTCTGTATTGGAGCA
GGGTTCAATTGTATTTTCCAGCAATGTTTGAATTTCCTGATTGACGTGTA
TCGCGTGTATGCAGCTAGTTCAACGGCGGCTGTTACGTTCCTGAGAAGTA
TCATGGCGGCGGGGTTGCCGTTGGCGGCGAAGCCGATGATCAGGGCGTTG
GGGATTGGGCCGGCGATCTCGATTATTGGCGCTGTGGCGGCGGTGTTGTT
GCCCGTGCCGTTTTTGTTTGTGAGGTATGGGCCGGCGTTGAGGAGGGCGT
CGAAAATGATTGATGGGTGAATGGTCCGCATATGGCCCAAATCTGCCCAT
GACCAGCCATCGGACCTGGAAAAAGCGCCTCCTTCGCGCGACCCCGAATA
CCAGGTGAAATGGGACCCTGACGATCCCTTGAATCCGCAAAACTGGCCAG
TGCGGTACAAATGGTGGGTGACGGTGCAGTTGGGCATGCTCGCCCTGGCC
GGTAGTTTGGGCTCCAGCATCACCACTTCTGCCGATGACACCATCGCCGA
GTATATTGGCGTCAGTAGCGAGGTCGCTGTTCTCGATGTCTCTCTTTACA
TTCTCGGCTTCGTCCTCGGCCCCATCATCTGGGCTCCCCTCTCCGAAGTC
TGGGGTCGGCGCGTCAGCATGCTCCCAGCCCTCTTCTGCCTGGCCCTCTT
CGACATCGGCACCGCGACCAGTCGCAACGCCCCTGCCGTCTTCCTGACGC
GCTTCTTCGCCGGTTTCTTTGGCTCCGCGCCCATCAGCAACGTCACCGCT
GCCCTCGGCGACATGTGGAGCAAAGAAACACGAGGCACAGCTGTCAGCAT
CTACGCGATCGCCGTAAATGGCGGTCCAGACCTGGGCCCCATCATCGGCG
CGGCCATCATGGCGAACTCACATCTCGGCTGGCGCTGGACCGCATACATC
CACGCGATCTGGGTCTTCGCGACCTTTATCATGGCCTTTTTCTTCCTCCC
GGAACTCTACCCGCTCGTGCTGCTGAAACGCAAAGCGCAAAACCTCCGCA
AATCCACCAACGACAGCCGATACTGGCACCCCCATGAACACCTGCACCTG
TCTGTCCAATCTATCGTCACGAAACAGCTTGCTCGCCCGCTTCGCATGCT
CTGCACTGAACCTATCGTCACTTGCATCGCCTTTTACGCCGCCTTCGTCT
ACGCAGTCATGTACCTCACCCTCGAAGTCTTCCCTATCGCCTTCGAAGAA
CTTCGCGGCTGGTCCCCTGTCGTCGGGGCGCTGCCCTTCCTCGCTCTCCT
GATCGGTGTCATTCTATCCACCGGAATCAACATCTACAACCAGTTCCGCT
ATAACCGCATCTCCGCGGCCGCGAACGGCGCTCCCGTCCCTGAGGCCAGG
TTACCGCCCATGATGTTTGGCGGTGTTATTCTTGTCCTGGGGCTATTCTG
GTTCGCCTGGACAGCTACCCCCGCTTATCACTGGATCTTGCCGTGCTTGG
CAGCGTTCTGTATTGGAGCAGGGTTCAATTGTATTTTCCAGCAATGTTTG
AATTTCCTGATTGACGTGTATCGCGTGTATGCAGCTAGTTCAACGGCGGC
TGTTACGTTCCTGAGAAGTATCATGGCGGCGGGGTTGCCGTTGGCGGCGA
AGCCGATGATCAGGGCGTTGGGGATTGGGCCGGCGATCTCGATTATTGGC
GCTGTGGCGGCGGTGTTGTTGCCCGTGCCGTTTTTGTTTGTGAGGTATGG
GCCGGCGTTGAGGAGGGCGTCGAAAATGATTGATGGGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_000228ATCC10864_000228Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_000228-T1.exon1ATCC10864_000228-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_000228-T1.exon2ATCC10864_000228-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_000228-T1.cdsATCC10864_000228-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_000228-T1ATCC10864_000228-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR036259
InterProIPR011701
PFAMPF07690
InterProIPR020846
Properties
Property NameValue
NoteSMCOG1106:major facilitator transporter
NoteantiSMASH:Cluster_1000006.3
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000006supercontigMCQH01000006:638791..640311 +
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