|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at MCQH01000006:750216..751435+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC10864_000267-T1 ID=ATCC10864_000267-T1|Name=ATCC10864_000267-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1220bp|location=Sequence derived from alignment at MCQH01000006:750216..751435+ (Aspergillus niger ATCC 10864)
ATGGCCATGAATAAACCGCTCTCAGATCTCCAAGCGACCGGATATAGGCT
GCGCAAGTCACATGAGAAGTCCCGTAATGGCTGCCTCAGATGCAAGCAGT
TACGCAAGAAGGTACTACACGAAGCATATGCTGTGCTTCCATCCTATACG
CTTCAGACCAATCATTCTGATTATATCGCCAGTGCGATGAAGCCAGACCG
AAATGCTCACGTTGCACCAGACTCTCGTACACATGTCAATATCAACACCG
TCCGAATACCAGCGAATCGGACACAGAGCCGACGGGTTTCCCGAACTCGG
AGATTGAATTCGCTGGATCCGAACTGACATCGAGGCGGCTCTCGAGCGAT
CGTCCATCGGGTCCTATCACTCCCTCCATTGGTCAACTTCCCCTTTCGCC
ACAATCAAATGGCGAGGAAGATATACCCGGCTTAGACCTGCCCTCCCCGG
ATCCTCTCAACGCGACCGAACTCAATCTCCTAGCTCATTACCTCTCGCAC
ACTAGCCAAACGATCCCATTCGATTCTCTCGATCTCTACGCTCTGGCTGT
CGGAGTACCTAATCTTGCCTTCAAATGCAAGGCTGTCATGTCATCCCTGC
TAAGCCTGGCAGCAGCATGCAAATGCCACGACATAGCAAATGAGAACACC
CAAAGACCCCTCGACACACGGACCTTAACAGAGATCAATGACCTCCTTGC
GTTAGCCGAACGCCATCACGCGGCATCTCTCCGCAACATCCAAGCCACGA
TGCAAATAACCGAATCCTACGATAACGTCCTCGCCAATGCAGCATTGATG
GTCTTGTACGCATCGGCCAGCCACTCCATTCGTGTCCTCTGGCAGCCACA
GCTGAGAAATATGGACAGAGGCTGCCGAAAGAATTATTGCCGCAACATTC
GCAGTGGATTTCGTTCACACGCGCAGCGCATACCGCATCTAGTGCTATAC
TCCATGATATTGTTAACGCTACTCCTTCCAGCAGCACGGTGGTGGATACG
GGATCAGAGTCCCATGGAACAACATCAAGTCCTTCATCACCGCAAGGCGG
TCCATCTCCGAAAACGAAGAGCTTATTCCTCCCGCTCGTTGCATCTACCT
GTAATCGAGCTCTTGGAAATCTTCGTAGGAGAGCAGAACGCACAACTGCA
GAGCAGCGTTCCTCTGCTTTATGTAGCGCGATTGGCCAGCGACGGGCTCA
CGCATTACTGGAAACCATAA back to topCoding sequence (CDS) from alignment at MCQH01000006:750216..751435+ >ATCC10864_000267-T1 ID=ATCC10864_000267-T1|Name=ATCC10864_000267-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2298bp|location=Sequence derived from alignment at MCQH01000006:750216..751435+ (Aspergillus niger ATCC 10864)
ATGGCCATGAATAAACCGCTCTCAGATCTCCAAGCGACCGGATATAGGCT
GCGCAAGTCACATGAGAAGTCCCGTAATGGCTGCCTCAGATGCAAGCAGT
TACGCAAGAAGTGCGATGAAGCCAGACCGAAATGCTCACGTTGCACCAGA
CTCTCGTACACATGTCAATATCAACACCGTCCGAATACCAGCGAATCGGA
CACAGAGCCGACGGGTTTCCCGAACTCGGAGATTGAATTCGCTGGATCCG
AACTGACATCGAGGCGGCTCTCGAGCGATCGTCCATCGGGTCCTATCACT
CCCTCCATTGGTCAACTTCCCCTTTCGCCACAATCAAATGGCGAGGAAGA
TATACCCGGCTTAGACCTGCCCTCCCCGGATCCTCTCAACGCGACCGAAC
TCAATCTCCTAGCTCATTACCTCTCGCACACTAGCCAAACGATCCCATTC
GATTCTCTCGATCTCTACGCTCTGGCTGTCGGAGTACCTAATCTTGCCTT
CAAATGCAAGGCTGTCATGTCATCCCTGCTAAGCCTGGCAGCAGCATGCA
AATGCCACGACATAGCAAATGAGAACACCCAAAGACCCCTCGACACACGG
ACCTTAACAGAGATCAATGACCTCCTTGCGTTAGCCGAACGCCATCACGC
GGCATCTCTCCGCAACATCCAAGCCACGATGCAAATAACCGAATCCTACG
ATAACGTCCTCGCCAATGCAGCATTGATGGTCTTGTACGCATCGGCCAGC
CACTCCATTCGTGTCCTCTGGCAGCCACAGCTGAGAAATATGGACAGAGG
CTGCCGAAAGAATTATTGCCGCAACATTCGCAGTGGATTTCGTTCACACG
CGCAGCGCATACCGCATCTAGTGCTATACTCCATGATATTGTTAACGCTA
CTCCTTCCAGCAGCACGGTGGTGGATACGGGATCAGAGTCCCATGGAACA
ACATCAAGTCCTTCATCACCGCAAGGCGGTCCATCTCCGAAAACGAAGAG
CTTATTCCTCCCGCTCGTTGCATCTACCTGTAATCGAGCTCTTGGAAATC
TTCGTAGGAGAGCAGAACGCACAACTGCAGAGCAGCGTTCCTCTGCTTTA
TGTAGCGCGATTGGCCAGCGACGGGCTCACGCATTACTGGAAACCATAAA
TGGCCATGAATAAACCGCTCTCAGATCTCCAAGCGACCGGATATAGGCTG
CGCAAGTCACATGAGAAGTCCCGTAATGGCTGCCTCAGATGCAAGCAGTT
ACGCAAGAAGTGCGATGAAGCCAGACCGAAATGCTCACGTTGCACCAGAC
TCTCGTACACATGTCAATATCAACACCGTCCGAATACCAGCGAATCGGAC
ACAGAGCCGACGGGTTTCCCGAACTCGGAGATTGAATTCGCTGGATCCGA
ACTGACATCGAGGCGGCTCTCGAGCGATCGTCCATCGGGTCCTATCACTC
CCTCCATTGGTCAACTTCCCCTTTCGCCACAATCAAATGGCGAGGAAGAT
ATACCCGGCTTAGACCTGCCCTCCCCGGATCCTCTCAACGCGACCGAACT
CAATCTCCTAGCTCATTACCTCTCGCACACTAGCCAAACGATCCCATTCG
ATTCTCTCGATCTCTACGCTCTGGCTGTCGGAGTACCTAATCTTGCCTTC
AAATGCAAGGCTGTCATGTCATCCCTGCTAAGCCTGGCAGCAGCATGCAA
ATGCCACGACATAGCAAATGAGAACACCCAAAGACCCCTCGACACACGGA
CCTTAACAGAGATCAATGACCTCCTTGCGTTAGCCGAACGCCATCACGCG
GCATCTCTCCGCAACATCCAAGCCACGATGCAAATAACCGAATCCTACGA
TAACGTCCTCGCCAATGCAGCATTGATGGTCTTGTACGCATCGGCCAGCC
ACTCCATTCGTGTCCTCTGGCAGCCACAGCTGAGAAATATGGACAGAGGC
TGCCGAAAGAATTATTGCCGCAACATTCGCAGTGGATTTCGTTCACACGC
GCAGCGCATACCGCATCTAGTGCTATACTCCATGATATTGTTAACGCTAC
TCCTTCCAGCAGCACGGTGGTGGATACGGGATCAGAGTCCCATGGAACAA
CATCAAGTCCTTCATCACCGCAAGGCGGTCCATCTCCGAAAACGAAGAGC
TTATTCCTCCCGCTCGTTGCATCTACCTGTAATCGAGCTCTTGGAAATCT
TCGTAGGAGAGCAGAACGCACAACTGCAGAGCAGCGTTCCTCTGCTTTAT
GTAGCGCGATTGGCCAGCGACGGGCTCACGCATTACTGGAAACCATAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Cross References
External references for this mRNA
| Database | Accession |
|---|
| InterPro | IPR001138 |
| PFAM | PF00172 |
| InterPro | IPR036864 |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| MCQH01000006 | supercontig | MCQH01000006:750216..751435 + |
|
