You are here

Home

ATCC10864_000284-T1, ATCC10864_000284-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_000284-T1
Unique NameATCC10864_000284-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000006:791035..791933+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_000284-T1 ID=ATCC10864_000284-T1|Name=ATCC10864_000284-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=899bp|location=Sequence derived from alignment at MCQH01000006:791035..791933+ (Aspergillus niger ATCC 10864)
ATGAGTCTCTTCATGCGAGCAAGCGATGCTCTCAACGTCAACCCAGTTGC
AGGCGTTGATGAAGCCCTATCTGTGCATGGATCCGACTGGCTTTGGGCTA
TCACAGCCATCTATATTGTATCATTCGTGAGTCATTTTTGTACTCTAATT
TTAATTTCACCTATTGACATTAAACATAGCTTGGCCTCCTGACAATGTCC
TTCTCCGGAAAAGAAAGTGAACGAGTATTCCACTACCTCTTCACCTTTCT
CCTCCTAGTCGGCGCAATAACCTACTACGCCCAAGCCTCTGATCTCGGCT
GGAGCGCTGTGGAACAAGTCAACAATCTCGACAACGGAGCAATACGCCAG
ATGTTCTGGGCAAAATACGTCAACTGGGTTGTTGCATTCCCTTCACTCGC
CCTTGCACTCGGTCTCGTCTCAGGGGTTTCATGGACGACCATGATCTGCA
ATATCGCACTTGCCTGCTATTGGGTCACCAGCTACCTCGTGTCCGCATAC
ACGCCCTCAACCTACAAATGGGGGTTTTTCGCTTTTGGAACCCTATCCTG
GGGGATTCTCGCCATGAGCACTATAAACGAGAGTCGGGAAGCCGCGCAAC
GGCTTGGGGTGGATCGTGATTACATTATTCTCTCTGGGTGGTGCAACCTG
CTTTGGCTTTTGTACCCTGTGGCCTGGGGTTTGAGTGATGGGGGGAATGT
TATTGGGATCACAGAAGCCACTATTTTCTTTGGGATTCTTGATATCCTCA
TGGTGCCGCTTTTGACATTTATGTTTCTTTTCTTTGCACGGAATTGGGAT
TATCAGAAGTTGAGTATTGCCTTTAGTGATGCGAGGCCGAGTCGGGAGGC
ACAGAGTCCTAAGCAGCAGCAGGTGGCAGAGAGTAGTCCTTCTGCTTAG
back to top

Coding sequence (CDS) from alignment at MCQH01000006:791035..791933+

>ATCC10864_000284-T1 ID=ATCC10864_000284-T1|Name=ATCC10864_000284-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1692bp|location=Sequence derived from alignment at MCQH01000006:791035..791933+ (Aspergillus niger ATCC 10864)
ATGAGTCTCTTCATGCGAGCAAGCGATGCTCTCAACGTCAACCCAGTTGC
AGGCGTTGATGAAGCCCTATCTGTGCATGGATCCGACTGGCTTTGGGCTA
TCACAGCCATCTATATTGTATCATTCCTTGGCCTCCTGACAATGTCCTTC
TCCGGAAAAGAAAGTGAACGAGTATTCCACTACCTCTTCACCTTTCTCCT
CCTAGTCGGCGCAATAACCTACTACGCCCAAGCCTCTGATCTCGGCTGGA
GCGCTGTGGAACAAGTCAACAATCTCGACAACGGAGCAATACGCCAGATG
TTCTGGGCAAAATACGTCAACTGGGTTGTTGCATTCCCTTCACTCGCCCT
TGCACTCGGTCTCGTCTCAGGGGTTTCATGGACGACCATGATCTGCAATA
TCGCACTTGCCTGCTATTGGGTCACCAGCTACCTCGTGTCCGCATACACG
CCCTCAACCTACAAATGGGGGTTTTTCGCTTTTGGAACCCTATCCTGGGG
GATTCTCGCCATGAGCACTATAAACGAGAGTCGGGAAGCCGCGCAACGGC
TTGGGGTGGATCGTGATTACATTATTCTCTCTGGGTGGTGCAACCTGCTT
TGGCTTTTGTACCCTGTGGCCTGGGGTTTGAGTGATGGGGGGAATGTTAT
TGGGATCACAGAAGCCACTATTTTCTTTGGGATTCTTGATATCCTCATGG
TGCCGCTTTTGACATTTATGTTTCTTTTCTTTGCACGGAATTGGGATTAT
CAGAAGTTGAGTATTGCCTTTAGTGATGCGAGGCCGAGTCGGGAGGCACA
GAGTCCTAAGCAGCAGCAGGTGGCAGAGAGTAGTCCTTCTGCTTAGATGA
GTCTCTTCATGCGAGCAAGCGATGCTCTCAACGTCAACCCAGTTGCAGGC
GTTGATGAAGCCCTATCTGTGCATGGATCCGACTGGCTTTGGGCTATCAC
AGCCATCTATATTGTATCATTCCTTGGCCTCCTGACAATGTCCTTCTCCG
GAAAAGAAAGTGAACGAGTATTCCACTACCTCTTCACCTTTCTCCTCCTA
GTCGGCGCAATAACCTACTACGCCCAAGCCTCTGATCTCGGCTGGAGCGC
TGTGGAACAAGTCAACAATCTCGACAACGGAGCAATACGCCAGATGTTCT
GGGCAAAATACGTCAACTGGGTTGTTGCATTCCCTTCACTCGCCCTTGCA
CTCGGTCTCGTCTCAGGGGTTTCATGGACGACCATGATCTGCAATATCGC
ACTTGCCTGCTATTGGGTCACCAGCTACCTCGTGTCCGCATACACGCCCT
CAACCTACAAATGGGGGTTTTTCGCTTTTGGAACCCTATCCTGGGGGATT
CTCGCCATGAGCACTATAAACGAGAGTCGGGAAGCCGCGCAACGGCTTGG
GGTGGATCGTGATTACATTATTCTCTCTGGGTGGTGCAACCTGCTTTGGC
TTTTGTACCCTGTGGCCTGGGGTTTGAGTGATGGGGGGAATGTTATTGGG
ATCACAGAAGCCACTATTTTCTTTGGGATTCTTGATATCCTCATGGTGCC
GCTTTTGACATTTATGTTTCTTTTCTTTGCACGGAATTGGGATTATCAGA
AGTTGAGTATTGCCTTTAGTGATGCGAGGCCGAGTCGGGAGGCACAGAGT
CCTAAGCAGCAGCAGGTGGCAGAGAGTAGTCCTTCTGCTTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005216ion channel activity
Vocabulary: Biological Process
TermDefinition
GO:0006811ion transport
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_000284ATCC10864_000284Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_000284-T1.exon1ATCC10864_000284-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_000284-T1.exon2ATCC10864_000284-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_000284-T1.cdsATCC10864_000284-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_000284-T1ATCC10864_000284-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR043476
PFAMPF01036
InterProIPR001425
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000006supercontigMCQH01000006:791035..791933 +
Powered by Drupal