You are here

Home

ATCC10864_000300-T1, ATCC10864_000300-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_000300-T1
Unique NameATCC10864_000300-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000006:833323..834884+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_000300-T1 ID=ATCC10864_000300-T1|Name=ATCC10864_000300-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1562bp|location=Sequence derived from alignment at MCQH01000006:833323..834884+ (Aspergillus niger ATCC 10864)
ATGTCCACCAATACCAGCCCCATCAAAATAGAAATCGCCATAATTGGCTC
CGGCCTAATCGGGACCCTCCTGGCCCTAGGCCTCCTCAACATCCCCATCC
CCAACACCACCAAAGACCCTCAATCTACCAACGAAGGCCAAAGAAGCACA
ACCCTCAGCATAAAAATCTATGAACAATCCCCCACCGCGCACGAACTCGG
CGCCGGAATCGGCTTCACGACCTGCGCGCGGAAATGCATGGCGCTCATGG
ACCCCCGCATCGCGGAGTGTGTGGCCCGCGTAGCGACACTTAACGGCGAA
CCAGAGGATCCAGATTACTGTATGCGGTTTGTGGATGGGTTTAGGACGTA
TACGGAGGGTGATTGTTGGGGGACGACGTCGAAAGGGGATGCGGAGGGGG
GAATTGGTGTGGATGTTAGGGGGGGAGGTAGTGATAGAGTTAATGATGAA
TCTGATAGTAGAGATGAAGATAAAGATGACAATGGGGGCGAAGGTGTGTA
TGTCTCCGGGAAAGTCTACAAATTGTATGCCGGCCCACGCCGCTTCGAAG
GTTGCCACCGGGGCCAGTTCCTGGAAGAAGTGATGAAACTCATGCCTGAG
GGAGCAGTGGAGTATAGTAAGCGGGTGGAGGGGTATGAGTATCTCCCTTC
GGGGAGGATTCAGTTGGGGTTTAGTGATGGAGGGAGGGTGGAGTGTGATC
TTGGTAAGTGTATCTTCATCCAAATTTCTAAGTCTTTCTTAAACAAGATG
CTAATAAGTGATCAGTCCTCGCCTGCGACGGCATCAAATCCCTCATTCGC
ACCCACCTCTACCCCCAGAGCAAACCACAATACACCCACCAATTCGCCTT
CCGGGGCCTGGTCCCCATGGCCACGGCAATCAAAAAGCTAGGCCGCTACC
GCGCTCTCCGCCAACACATGCACTGCGGACCGCGCGCACACGTGCTCCAC
TTCCCCGTCGCGAAGCAGCAGCTCATGAATGTCGTTGCGTTCGTGCAAGA
CCCGAATGACTGGACGCACGCCGGAATGACCGCGCCAGCGAGGAAGAGTG
AAGTCGTGGAAGCGTTCAAGGAATGGGGCCCGTTTGTGCGCGCCGTGATT
GATCTGCTGCCTGAGGAGCTGGATAAGTGGGCTGTGTTTGATACTTTTGA
TAGTCCGGTGCCGCGGTATGCGGAGGGAAGAGTAGCTTTGGTAGGGGATG
CGGCGCATGCGTCGTCGCCGCATCATGGGGCCGGGGCGGGGATGGGGGTG
GAGGATGCATTGGCGCTGGTTACGGCTATTAAGAGGGCAAGGGAGGATGT
GGATCGCGGGACGGAGGTGAATGTGGCGTTGGAGGCAGCGGTGCGGGCGT
ATTCGAGGGTCAGGTATGAGCGGTCGCAGTGGTTGGTGAGGAGTAGTCGC
GAGGTGGGATGGACGTATGAGTGGATGAGTGAGGATGTTGGGGCAGATAT
GGATCGTGCGTTTGCAGATATAAAAAAGAGGAGTTATCGGGTGTGGCATT
TTGATGTAGAGGCCATGGTGGCAGAAGTGGGAAGACAATATCGATGGTGT
TTGTGGAACTAG
back to top

Coding sequence (CDS) from alignment at MCQH01000006:833323..834884+

>ATCC10864_000300-T1 ID=ATCC10864_000300-T1|Name=ATCC10864_000300-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3000bp|location=Sequence derived from alignment at MCQH01000006:833323..834884+ (Aspergillus niger ATCC 10864)
ATGTCCACCAATACCAGCCCCATCAAAATAGAAATCGCCATAATTGGCTC
CGGCCTAATCGGGACCCTCCTGGCCCTAGGCCTCCTCAACATCCCCATCC
CCAACACCACCAAAGACCCTCAATCTACCAACGAAGGCCAAAGAAGCACA
ACCCTCAGCATAAAAATCTATGAACAATCCCCCACCGCGCACGAACTCGG
CGCCGGAATCGGCTTCACGACCTGCGCGCGGAAATGCATGGCGCTCATGG
ACCCCCGCATCGCGGAGTGTGTGGCCCGCGTAGCGACACTTAACGGCGAA
CCAGAGGATCCAGATTACTGTATGCGGTTTGTGGATGGGTTTAGGACGTA
TACGGAGGGTGATTGTTGGGGGACGACGTCGAAAGGGGATGCGGAGGGGG
GAATTGGTGTGGATGTTAGGGGGGGAGGTAGTGATAGAGTTAATGATGAA
TCTGATAGTAGAGATGAAGATAAAGATGACAATGGGGGCGAAGGTGTGTA
TGTCTCCGGGAAAGTCTACAAATTGTATGCCGGCCCACGCCGCTTCGAAG
GTTGCCACCGGGGCCAGTTCCTGGAAGAAGTGATGAAACTCATGCCTGAG
GGAGCAGTGGAGTATAGTAAGCGGGTGGAGGGGTATGAGTATCTCCCTTC
GGGGAGGATTCAGTTGGGGTTTAGTGATGGAGGGAGGGTGGAGTGTGATC
TTGTCCTCGCCTGCGACGGCATCAAATCCCTCATTCGCACCCACCTCTAC
CCCCAGAGCAAACCACAATACACCCACCAATTCGCCTTCCGGGGCCTGGT
CCCCATGGCCACGGCAATCAAAAAGCTAGGCCGCTACCGCGCTCTCCGCC
AACACATGCACTGCGGACCGCGCGCACACGTGCTCCACTTCCCCGTCGCG
AAGCAGCAGCTCATGAATGTCGTTGCGTTCGTGCAAGACCCGAATGACTG
GACGCACGCCGGAATGACCGCGCCAGCGAGGAAGAGTGAAGTCGTGGAAG
CGTTCAAGGAATGGGGCCCGTTTGTGCGCGCCGTGATTGATCTGCTGCCT
GAGGAGCTGGATAAGTGGGCTGTGTTTGATACTTTTGATAGTCCGGTGCC
GCGGTATGCGGAGGGAAGAGTAGCTTTGGTAGGGGATGCGGCGCATGCGT
CGTCGCCGCATCATGGGGCCGGGGCGGGGATGGGGGTGGAGGATGCATTG
GCGCTGGTTACGGCTATTAAGAGGGCAAGGGAGGATGTGGATCGCGGGAC
GGAGGTGAATGTGGCGTTGGAGGCAGCGGTGCGGGCGTATTCGAGGGTCA
GGTATGAGCGGTCGCAGTGGTTGGTGAGGAGTAGTCGCGAGGTGGGATGG
ACGTATGAGTGGATGAGTGAGGATGTTGGGGCAGATATGGATCGTGCGTT
TGCAGATATAAAAAAGAGGAGTTATCGGGTGTGGCATTTTGATGTAGAGG
CCATGGTGGCAGAAGTGGGAAGACAATATCGATGGTGTTTGTGGAACTAG
ATGTCCACCAATACCAGCCCCATCAAAATAGAAATCGCCATAATTGGCTC
CGGCCTAATCGGGACCCTCCTGGCCCTAGGCCTCCTCAACATCCCCATCC
CCAACACCACCAAAGACCCTCAATCTACCAACGAAGGCCAAAGAAGCACA
ACCCTCAGCATAAAAATCTATGAACAATCCCCCACCGCGCACGAACTCGG
CGCCGGAATCGGCTTCACGACCTGCGCGCGGAAATGCATGGCGCTCATGG
ACCCCCGCATCGCGGAGTGTGTGGCCCGCGTAGCGACACTTAACGGCGAA
CCAGAGGATCCAGATTACTGTATGCGGTTTGTGGATGGGTTTAGGACGTA
TACGGAGGGTGATTGTTGGGGGACGACGTCGAAAGGGGATGCGGAGGGGG
GAATTGGTGTGGATGTTAGGGGGGGAGGTAGTGATAGAGTTAATGATGAA
TCTGATAGTAGAGATGAAGATAAAGATGACAATGGGGGCGAAGGTGTGTA
TGTCTCCGGGAAAGTCTACAAATTGTATGCCGGCCCACGCCGCTTCGAAG
GTTGCCACCGGGGCCAGTTCCTGGAAGAAGTGATGAAACTCATGCCTGAG
GGAGCAGTGGAGTATAGTAAGCGGGTGGAGGGGTATGAGTATCTCCCTTC
GGGGAGGATTCAGTTGGGGTTTAGTGATGGAGGGAGGGTGGAGTGTGATC
TTGTCCTCGCCTGCGACGGCATCAAATCCCTCATTCGCACCCACCTCTAC
CCCCAGAGCAAACCACAATACACCCACCAATTCGCCTTCCGGGGCCTGGT
CCCCATGGCCACGGCAATCAAAAAGCTAGGCCGCTACCGCGCTCTCCGCC
AACACATGCACTGCGGACCGCGCGCACACGTGCTCCACTTCCCCGTCGCG
AAGCAGCAGCTCATGAATGTCGTTGCGTTCGTGCAAGACCCGAATGACTG
GACGCACGCCGGAATGACCGCGCCAGCGAGGAAGAGTGAAGTCGTGGAAG
CGTTCAAGGAATGGGGCCCGTTTGTGCGCGCCGTGATTGATCTGCTGCCT
GAGGAGCTGGATAAGTGGGCTGTGTTTGATACTTTTGATAGTCCGGTGCC
GCGGTATGCGGAGGGAAGAGTAGCTTTGGTAGGGGATGCGGCGCATGCGT
CGTCGCCGCATCATGGGGCCGGGGCGGGGATGGGGGTGGAGGATGCATTG
GCGCTGGTTACGGCTATTAAGAGGGCAAGGGAGGATGTGGATCGCGGGAC
GGAGGTGAATGTGGCGTTGGAGGCAGCGGTGCGGGCGTATTCGAGGGTCA
GGTATGAGCGGTCGCAGTGGTTGGTGAGGAGTAGTCGCGAGGTGGGATGG
ACGTATGAGTGGATGAGTGAGGATGTTGGGGCAGATATGGATCGTGCGTT
TGCAGATATAAAAAAGAGGAGTTATCGGGTGTGGCATTTTGATGTAGAGG
CCATGGTGGCAGAAGTGGGAAGACAATATCGATGGTGTTTGTGGAACTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0071949FAD binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_000300ATCC10864_000300Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_000300-T1.exon1ATCC10864_000300-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_000300-T1.exon2ATCC10864_000300-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_000300-T1.cdsATCC10864_000300-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_000300-T1ATCC10864_000300-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF01494
InterProIPR002938
InterProIPR036188
Properties
Property NameValue
NoteSMCOG1087:hypothetical protein
NoteantiSMASH:Cluster_1000006.5
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000006supercontigMCQH01000006:833323..834884 +
Powered by Drupal