You are here

Home

ATCC10864_000350-T1, ATCC10864_000350-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_000350-T1
Unique NameATCC10864_000350-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000006:965952..967104+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_000350-T1 ID=ATCC10864_000350-T1|Name=ATCC10864_000350-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1153bp|location=Sequence derived from alignment at MCQH01000006:965952..967104+ (Aspergillus niger ATCC 10864)
ATGATCGAGTCCTTCATCAAGGCGACTCCAACTCTCCCTTGGCCTGAGCC
ATCGCCCACCTCGTCGGTGGCGCCCATTCCCACTGTCGTTCCCGGCAGTG
ATCCCATCTTCCAGGTGCTCCATGACACCGGGAAACGGACACTATGGTAA
GACTGTTGCTGACGGAAATACGGAAATGTGACGAGTATAGCTAATGTCGA
GTTACACAGGGTGGTTACTGTGCTCATGGGTATCTCCTCTCTCGTGTTCT
ACGTTCTAGGTGCTCGGGTCCCTATCGTAAGTTCTCAGCAGCTACCACTG
AATCTTGGGAACGGTAACTAACTATACTCTTGACTAGACTAAACGCGTGT
TCCACGTTCTCGTTGCTCTCGCCAGCACCATCTCCTTTATCATCTACCTC
GCTCTGGCGACAGGACAAGGCATGGACTGGAAGCTCGACATCATCAAGGA
GCACAACAAGCATGTCCCCAACACCACGCAGGAATACTACCGTCAAATCC
TCTGGCTCCGCTATGTCCTTTGGTTCTTGACGGAGCCTTTGGGTCTCATC
AGCTTGTCGCTGCTCTCCGGTCTGCCTGGCGCCCACCTACTCATCGCCAT
CGCGGCCGACTTTATCATGCTGGGCTCGGGCATTCTGGGCACCTATGCCG
GCCATTCCTCGCGCAGATGGGTCTGGTTCACTATTAGCGCAATCGGATAT
CTTACAACAGTCTACCATATCAGTGTCCATGGAAGCCGGGCAGCGAGCAA
CAAGGATGTCCAGACCAAGCGGTTCTTCGGAACTCTGTCGGGCGTCATGT
TGTTTGTCAAGCTCTTGTACCCAGTGTATGTTCCTTTGGCCCAAGAGGAT
CTGTTGAACAATGTACTAACATGGAATAGGGCCCTCGCTGCTGGAGCTTT
GGCGCTGAAAATCAACGTTGATGTCGAGACCATCCTCTTTGCCATCTACG
ATATCTTCTCCCAGGGTATTCTCGGTTATTGGCTGCTCATTGCGCATGAC
GGCGCTCCTGGAATGTATGTACCAACCGCTCATTGGTTTGGAACCTAGCG
TCAAACTAACCATCTCATCAGTACCCTCAACGTTGACGGATTTTGGTCCC
ACGGCCTGGGTAACGAGGGCGCTATTCGCATCAGCGAAGAAGACGGAGCA
TAA
back to top

Coding sequence (CDS) from alignment at MCQH01000006:965952..967104+

>ATCC10864_000350-T1 ID=ATCC10864_000350-T1|Name=ATCC10864_000350-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=4590bp|location=Sequence derived from alignment at MCQH01000006:965952..967104+ (Aspergillus niger ATCC 10864)
ATGATCGAGTCCTTCATCAAGGCGACTCCAACTCTCCCTTGGCCTGAGCC
ATCGCCCACCTCGTCGGTGGCGCCCATTCCCACTGTCGTTCCCGGCAGTG
ATCCCATCTTCCAGGTGCTCCATGACACCGGGAAACGGACACTATGGGTG
GTTACTGTGCTCATGGGTATCTCCTCTCTCGTGTTCTACGTTCTAGGTGC
TCGGGTCCCTATCACTAAACGCGTGTTCCACGTTCTCGTTGCTCTCGCCA
GCACCATCTCCTTTATCATCTACCTCGCTCTGGCGACAGGACAAGGCATG
GACTGGAAGCTCGACATCATCAAGGAGCACAACAAGCATGTCCCCAACAC
CACGCAGGAATACTACCGTCAAATCCTCTGGCTCCGCTATGTCCTTTGGT
TCTTGACGGAGCCTTTGGGTCTCATCAGCTTGTCGCTGCTCTCCGGTCTG
CCTGGCGCCCACCTACTCATCGCCATCGCGGCCGACTTTATCATGCTGGG
CTCGGGCATTCTGGGCACCTATGCCGGCCATTCCTCGCGCAGATGGGTCT
GGTTCACTATTAGCGCAATCGGATATCTTACAACAGTCTACCATATCAGT
GTCCATGGAAGCCGGGCAGCGAGCAACAAGGATGTCCAGACCAAGCGGTT
CTTCGGAACTCTGTCGGGCGTCATGTTGTTTGTCAAGCTCTTGTACCCAG
TGGCCCTCGCTGCTGGAGCTTTGGCGCTGAAAATCAACGTTGATGTCGAG
ACCATCCTCTTTGCCATCTACGATATCTTCTCCCAGGGTATTCTCGGTTA
TTGGCTGCTCATTGCGCATGACGGCGCTCCTGGAATTACCCTCAACGTTG
ACGGATTTTGGTCCCACGGCCTGGGTAACGAGGGCGCTATTCGCATCAGC
GAAGAAGACGGAGCATAAATGATCGAGTCCTTCATCAAGGCGACTCCAAC
TCTCCCTTGGCCTGAGCCATCGCCCACCTCGTCGGTGGCGCCCATTCCCA
CTGTCGTTCCCGGCAGTGATCCCATCTTCCAGGTGCTCCATGACACCGGG
AAACGGACACTATGGGTGGTTACTGTGCTCATGGGTATCTCCTCTCTCGT
GTTCTACGTTCTAGGTGCTCGGGTCCCTATCACTAAACGCGTGTTCCACG
TTCTCGTTGCTCTCGCCAGCACCATCTCCTTTATCATCTACCTCGCTCTG
GCGACAGGACAAGGCATGGACTGGAAGCTCGACATCATCAAGGAGCACAA
CAAGCATGTCCCCAACACCACGCAGGAATACTACCGTCAAATCCTCTGGC
TCCGCTATGTCCTTTGGTTCTTGACGGAGCCTTTGGGTCTCATCAGCTTG
TCGCTGCTCTCCGGTCTGCCTGGCGCCCACCTACTCATCGCCATCGCGGC
CGACTTTATCATGCTGGGCTCGGGCATTCTGGGCACCTATGCCGGCCATT
CCTCGCGCAGATGGGTCTGGTTCACTATTAGCGCAATCGGATATCTTACA
ACAGTCTACCATATCAGTGTCCATGGAAGCCGGGCAGCGAGCAACAAGGA
TGTCCAGACCAAGCGGTTCTTCGGAACTCTGTCGGGCGTCATGTTGTTTG
TCAAGCTCTTGTACCCAGTGGCCCTCGCTGCTGGAGCTTTGGCGCTGAAA
ATCAACGTTGATGTCGAGACCATCCTCTTTGCCATCTACGATATCTTCTC
CCAGGGTATTCTCGGTTATTGGCTGCTCATTGCGCATGACGGCGCTCCTG
GAATTACCCTCAACGTTGACGGATTTTGGTCCCACGGCCTGGGTAACGAG
GGCGCTATTCGCATCAGCGAAGAAGACGGAGCATAAATGATCGAGTCCTT
CATCAAGGCGACTCCAACTCTCCCTTGGCCTGAGCCATCGCCCACCTCGT
CGGTGGCGCCCATTCCCACTGTCGTTCCCGGCAGTGATCCCATCTTCCAG
GTGCTCCATGACACCGGGAAACGGACACTATGGGTGGTTACTGTGCTCAT
GGGTATCTCCTCTCTCGTGTTCTACGTTCTAGGTGCTCGGGTCCCTATCA
CTAAACGCGTGTTCCACGTTCTCGTTGCTCTCGCCAGCACCATCTCCTTT
ATCATCTACCTCGCTCTGGCGACAGGACAAGGCATGGACTGGAAGCTCGA
CATCATCAAGGAGCACAACAAGCATGTCCCCAACACCACGCAGGAATACT
ACCGTCAAATCCTCTGGCTCCGCTATGTCCTTTGGTTCTTGACGGAGCCT
TTGGGTCTCATCAGCTTGTCGCTGCTCTCCGGTCTGCCTGGCGCCCACCT
ACTCATCGCCATCGCGGCCGACTTTATCATGCTGGGCTCGGGCATTCTGG
GCACCTATGCCGGCCATTCCTCGCGCAGATGGGTCTGGTTCACTATTAGC
GCAATCGGATATCTTACAACAGTCTACCATATCAGTGTCCATGGAAGCCG
GGCAGCGAGCAACAAGGATGTCCAGACCAAGCGGTTCTTCGGAACTCTGT
CGGGCGTCATGTTGTTTGTCAAGCTCTTGTACCCAGTGGCCCTCGCTGCT
GGAGCTTTGGCGCTGAAAATCAACGTTGATGTCGAGACCATCCTCTTTGC
CATCTACGATATCTTCTCCCAGGGTATTCTCGGTTATTGGCTGCTCATTG
CGCATGACGGCGCTCCTGGAATTACCCTCAACGTTGACGGATTTTGGTCC
CACGGCCTGGGTAACGAGGGCGCTATTCGCATCAGCGAAGAAGACGGAGC
ATAAATGATCGAGTCCTTCATCAAGGCGACTCCAACTCTCCCTTGGCCTG
AGCCATCGCCCACCTCGTCGGTGGCGCCCATTCCCACTGTCGTTCCCGGC
AGTGATCCCATCTTCCAGGTGCTCCATGACACCGGGAAACGGACACTATG
GGTGGTTACTGTGCTCATGGGTATCTCCTCTCTCGTGTTCTACGTTCTAG
GTGCTCGGGTCCCTATCACTAAACGCGTGTTCCACGTTCTCGTTGCTCTC
GCCAGCACCATCTCCTTTATCATCTACCTCGCTCTGGCGACAGGACAAGG
CATGGACTGGAAGCTCGACATCATCAAGGAGCACAACAAGCATGTCCCCA
ACACCACGCAGGAATACTACCGTCAAATCCTCTGGCTCCGCTATGTCCTT
TGGTTCTTGACGGAGCCTTTGGGTCTCATCAGCTTGTCGCTGCTCTCCGG
TCTGCCTGGCGCCCACCTACTCATCGCCATCGCGGCCGACTTTATCATGC
TGGGCTCGGGCATTCTGGGCACCTATGCCGGCCATTCCTCGCGCAGATGG
GTCTGGTTCACTATTAGCGCAATCGGATATCTTACAACAGTCTACCATAT
CAGTGTCCATGGAAGCCGGGCAGCGAGCAACAAGGATGTCCAGACCAAGC
GGTTCTTCGGAACTCTGTCGGGCGTCATGTTGTTTGTCAAGCTCTTGTAC
CCAGTGGCCCTCGCTGCTGGAGCTTTGGCGCTGAAAATCAACGTTGATGT
CGAGACCATCCTCTTTGCCATCTACGATATCTTCTCCCAGGGTATTCTCG
GTTATTGGCTGCTCATTGCGCATGACGGCGCTCCTGGAATTACCCTCAAC
GTTGACGGATTTTGGTCCCACGGCCTGGGTAACGAGGGCGCTATTCGCAT
CAGCGAAGAAGACGGAGCATAAATGATCGAGTCCTTCATCAAGGCGACTC
CAACTCTCCCTTGGCCTGAGCCATCGCCCACCTCGTCGGTGGCGCCCATT
CCCACTGTCGTTCCCGGCAGTGATCCCATCTTCCAGGTGCTCCATGACAC
CGGGAAACGGACACTATGGGTGGTTACTGTGCTCATGGGTATCTCCTCTC
TCGTGTTCTACGTTCTAGGTGCTCGGGTCCCTATCACTAAACGCGTGTTC
CACGTTCTCGTTGCTCTCGCCAGCACCATCTCCTTTATCATCTACCTCGC
TCTGGCGACAGGACAAGGCATGGACTGGAAGCTCGACATCATCAAGGAGC
ACAACAAGCATGTCCCCAACACCACGCAGGAATACTACCGTCAAATCCTC
TGGCTCCGCTATGTCCTTTGGTTCTTGACGGAGCCTTTGGGTCTCATCAG
CTTGTCGCTGCTCTCCGGTCTGCCTGGCGCCCACCTACTCATCGCCATCG
CGGCCGACTTTATCATGCTGGGCTCGGGCATTCTGGGCACCTATGCCGGC
CATTCCTCGCGCAGATGGGTCTGGTTCACTATTAGCGCAATCGGATATCT
TACAACAGTCTACCATATCAGTGTCCATGGAAGCCGGGCAGCGAGCAACA
AGGATGTCCAGACCAAGCGGTTCTTCGGAACTCTGTCGGGCGTCATGTTG
TTTGTCAAGCTCTTGTACCCAGTGGCCCTCGCTGCTGGAGCTTTGGCGCT
GAAAATCAACGTTGATGTCGAGACCATCCTCTTTGCCATCTACGATATCT
TCTCCCAGGGTATTCTCGGTTATTGGCTGCTCATTGCGCATGACGGCGCT
CCTGGAATTACCCTCAACGTTGACGGATTTTGGTCCCACGGCCTGGGTAA
CGAGGGCGCTATTCGCATCAGCGAAGAAGACGGAGCATAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005216ion channel activity
Vocabulary: Biological Process
TermDefinition
GO:0006811ion transport
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_000350ATCC10864_000350Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_000350-T1ATCC10864_000350-T1-proteinAspergillus niger ATCC 10864polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_000350-T1.exon1ATCC10864_000350-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_000350-T1.exon2ATCC10864_000350-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_000350-T1.exon3ATCC10864_000350-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_000350-T1.exon4ATCC10864_000350-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_000350-T1.exon5ATCC10864_000350-T1.exon5Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_000350-T1.cdsATCC10864_000350-T1.cdsAspergillus niger ATCC 10864CDS


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF01036
InterProIPR001425
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000006supercontigMCQH01000006:965952..967104 +
Powered by Drupal