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ATCC10864_000356-T1, ATCC10864_000356-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_000356-T1
Unique NameATCC10864_000356-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000006:990295..991321-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_000356-T1 ID=ATCC10864_000356-T1|Name=ATCC10864_000356-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1027bp|location=Sequence derived from alignment at MCQH01000006:990295..991321- (Aspergillus niger ATCC 10864)
ATGGCTGACGCTCCCCGTGGACGTGGAGGATTCGGCTCTCGCGGTGACCG
TGGTGGTGACCGTGGCCGTGGCCGTGGTCGCCGTGGTCGTCGCGGTGGTG
CCAAGGAGCAGGAGAAGGAATGGCAGCCCGTCACCAAGCTCGGCCGTCTC
GTCAAGGCTGGCAAGATCACCAGCATGGAGCAGATCTACCTGCACTCCCT
GCCCGTGAAGGAGTACCAGATTGTGGACTTCTTCCTCCCCAAGCTGAAGG
ATGAGGTCATGAAGGTACGAACCGATCGCCCGATTACCGAATTGTCGACA
AGGAAGATCTACGATTGTGCGCGGGAAATAGGATTGAATGCGCGGGTGGA
ATTGATACGTGGATCGGAATTGCAGACATGATGGGATCAAAAAGGATATA
TCGAAAAAAAAATGGGAGGTGCTGACGGCTGGAAAATTTAGATCAAACCC
GTCCAGAAGCAGACCCGTGCCGGTCAGCGTACCCGCTTCAAGGCCGTCGT
CGTCATCGGTGACTCCGAGGGTCACATCGGTCTCGGTATCAAGACCTCCA
AGGAAGTCGCTACCGCTATCCGTGCTGCCATCACCATCGCCAAGCTCAGC
GTTCTCCCCGTCCGTAGAGGTTACTGGGGTACCAACCTTGGTGAGCCTCA
CTCTCTGCCCGTTAAGCAGAGCGCCAAGTGTGGTTCCGTCTCCGTCAGAG
TATGTCGCGACTCTTTTTCGATCCTCGATTTCGCTTTTCCGTCCGGCCAA
TATGCTAACCCGGTTATAGCTTATCCCCGCTCCCCGTGGTACCGGTCTCG
TTGCCTCCCCCGCTGTCAAGCGTCTGCTCCAGCTTGCCGGTGTCCAGGAC
GCCTACACCTGCTCTTCCGGTTCCACCAAGACCCTCGAGAACACTCTCAA
GGCTACTTTCCTTGCCGTCGTCAACACCTACGGCTTCCTCACCCCCAACC
TCTGGAAGGAGACTAAGCTCATCCGCAGCCCTCTGGAGGAGTTCGGTGAT
GTCCTGCGTCAGGGCAAGAAGTACTAG
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Coding sequence (CDS) from alignment at MCQH01000006:990295..991321-

>ATCC10864_000356-T1 ID=ATCC10864_000356-T1|Name=ATCC10864_000356-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2340bp|location=Sequence derived from alignment at MCQH01000006:990295..991321- (Aspergillus niger ATCC 10864)
CTTATCCCCGCTCCCCGTGGTACCGGTCTCGTTGCCTCCCCCGCTGTCAA
GCGTCTGCTCCAGCTTGCCGGTGTCCAGGACGCCTACACCTGCTCTTCCG
GTTCCACCAAGACCCTCGAGAACACTCTCAAGGCTACTTTCCTTGCCGTC
GTCAACACCTACGGCTTCCTCACCCCCAACCTCTGGAAGGAGACTAAGCT
CATCCGCAGCCCTCTGGAGGAGTTCGGTGATGTCCTGCGTCAGGGCAAGA
AGTACTAGATCAAACCCGTCCAGAAGCAGACCCGTGCCGGTCAGCGTACC
CGCTTCAAGGCCGTCGTCGTCATCGGTGACTCCGAGGGTCACATCGGTCT
CGGTATCAAGACCTCCAAGGAAGTCGCTACCGCTATCCGTGCTGCCATCA
CCATCGCCAAGCTCAGCGTTCTCCCCGTCCGTAGAGGTTACTGGGGTACC
AACCTTGGTGAGCCTCACTCTCTGCCCGTTAAGCAGAGCGCCAAGTGTGG
TTCCGTCTCCGTCAGAATGGCTGACGCTCCCCGTGGACGTGGAGGATTCG
GCTCTCGCGGTGACCGTGGTGGTGACCGTGGCCGTGGCCGTGGTCGCCGT
GGTCGTCGCGGTGGTGCCAAGGAGCAGGAGAAGGAATGGCAGCCCGTCAC
CAAGCTCGGCCGTCTCGTCAAGGCTGGCAAGATCACCAGCATGGAGCAGA
TCTACCTGCACTCCCTGCCCGTGAAGGAGTACCAGATTGTGGACTTCTTC
CTCCCCAAGCTGAAGGATGAGGTCATGAAGCTTATCCCCGCTCCCCGTGG
TACCGGTCTCGTTGCCTCCCCCGCTGTCAAGCGTCTGCTCCAGCTTGCCG
GTGTCCAGGACGCCTACACCTGCTCTTCCGGTTCCACCAAGACCCTCGAG
AACACTCTCAAGGCTACTTTCCTTGCCGTCGTCAACACCTACGGCTTCCT
CACCCCCAACCTCTGGAAGGAGACTAAGCTCATCCGCAGCCCTCTGGAGG
AGTTCGGTGATGTCCTGCGTCAGGGCAAGAAGTACTAGATCAAACCCGTC
CAGAAGCAGACCCGTGCCGGTCAGCGTACCCGCTTCAAGGCCGTCGTCGT
CATCGGTGACTCCGAGGGTCACATCGGTCTCGGTATCAAGACCTCCAAGG
AAGTCGCTACCGCTATCCGTGCTGCCATCACCATCGCCAAGCTCAGCGTT
CTCCCCGTCCGTAGAGGTTACTGGGGTACCAACCTTGGTGAGCCTCACTC
TCTGCCCGTTAAGCAGAGCGCCAAGTGTGGTTCCGTCTCCGTCAGAATGG
CTGACGCTCCCCGTGGACGTGGAGGATTCGGCTCTCGCGGTGACCGTGGT
GGTGACCGTGGCCGTGGCCGTGGTCGCCGTGGTCGTCGCGGTGGTGCCAA
GGAGCAGGAGAAGGAATGGCAGCCCGTCACCAAGCTCGGCCGTCTCGTCA
AGGCTGGCAAGATCACCAGCATGGAGCAGATCTACCTGCACTCCCTGCCC
GTGAAGGAGTACCAGATTGTGGACTTCTTCCTCCCCAAGCTGAAGGATGA
GGTCATGAAGCTTATCCCCGCTCCCCGTGGTACCGGTCTCGTTGCCTCCC
CCGCTGTCAAGCGTCTGCTCCAGCTTGCCGGTGTCCAGGACGCCTACACC
TGCTCTTCCGGTTCCACCAAGACCCTCGAGAACACTCTCAAGGCTACTTT
CCTTGCCGTCGTCAACACCTACGGCTTCCTCACCCCCAACCTCTGGAAGG
AGACTAAGCTCATCCGCAGCCCTCTGGAGGAGTTCGGTGATGTCCTGCGT
CAGGGCAAGAAGTACTAGATCAAACCCGTCCAGAAGCAGACCCGTGCCGG
TCAGCGTACCCGCTTCAAGGCCGTCGTCGTCATCGGTGACTCCGAGGGTC
ACATCGGTCTCGGTATCAAGACCTCCAAGGAAGTCGCTACCGCTATCCGT
GCTGCCATCACCATCGCCAAGCTCAGCGTTCTCCCCGTCCGTAGAGGTTA
CTGGGGTACCAACCTTGGTGAGCCTCACTCTCTGCCCGTTAAGCAGAGCG
CCAAGTGTGGTTCCGTCTCCGTCAGAATGGCTGACGCTCCCCGTGGACGT
GGAGGATTCGGCTCTCGCGGTGACCGTGGTGGTGACCGTGGCCGTGGCCG
TGGTCGCCGTGGTCGTCGCGGTGGTGCCAAGGAGCAGGAGAAGGAATGGC
AGCCCGTCACCAAGCTCGGCCGTCTCGTCAAGGCTGGCAAGATCACCAGC
ATGGAGCAGATCTACCTGCACTCCCTGCCCGTGAAGGAGTACCAGATTGT
GGACTTCTTCCTCCCCAAGCTGAAGGATGAGGTCATGAAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
GO:0003723RNA binding
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
GO:0015935small ribosomal subunit
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPS2ATCC10864_000356Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_000356-T1ATCC10864_000356-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_000356-T1.cdsATCC10864_000356-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_000356-T1.exon3ATCC10864_000356-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_000356-T1.exon2ATCC10864_000356-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_000356-T1.exon1ATCC10864_000356-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR000851
InterProIPR020568
InterProIPR014721
InterProIPR005711
InterProIPR018192
InterProIPR013810
PFAMPF00333
InterProIPR005324
PFAMPF03719
Properties
Property NameValue
NoteBUSCO:EOG09264903
Product40S ribosomal protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000006supercontigMCQH01000006:990295..991321 -
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