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ATCC10864_000357-T1, ATCC10864_000357-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_000357-T1
Unique NameATCC10864_000357-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000006:991810..992665+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_000357-T1 ID=ATCC10864_000357-T1|Name=ATCC10864_000357-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=856bp|location=Sequence derived from alignment at MCQH01000006:991810..992665+ (Aspergillus niger ATCC 10864)
ATGCTCCGGTGGTATGTCCCTATCCATCCTGATGATCAATATTTCCATCG
CTGATCAGGCACAGGTATCAAGCGAGGTTGGCCAAGCAGCCTATCCTCAC
TGCTAGTGTGACGAGTGCTGTAAGAACTCCATTCTTCTTTCTTACAAATC
AAGATTCATTTCCTCTCGTACTCTCTATTATCTAATGTCAACCCCGACGT
AATACCAATTTGAGCTGACCTTTATTTCCCATGCGGACTAGCTGTTGTTT
GGTAGTGGAGATGTTCTAGCCCAACAACTAGTCGATCGTAAGGGATTTGA
TAAGCACGACCTGGCAAGAACGGGACGCATGGCCCTTTATGGTGGAGGTG
AGCTACCATATAATCCCTTGTCAATCTGGGATCTTCTTTCTGCCCTTGGA
AGTCCTGGGAAAGCCTTCCTCCATACAATGGGAAGTGGTCAAGCTAACAT
ATAACAGCGATCTTCGGGCCGGCTGCTACCACCTGGTACGGTGTTCTCCA
GCGTCACGTCGTCCTGAATAACGCCAAAACTACCCTCATTGCCCGTGTCA
TCGCGGATCAATGTGTCTTCACTCCCGCACACCTTACTTGTTTCTTGTCC
TCCATGGCTATCATGGAAGGCACCGATCCGATCGAGAAGTGGCGCAATGG
TTTCGTTCCCAGCTTCAAAGCAAACCTTGCGATTTGGCCTCTCGTTCAAG
GAGTCAACTTTGCCATCGTGCCACTTGAGTACCGCGTGCTTTTTGTCAAC
CTAGTCGCTTTGGGTGTGTATTCCGGCCTTCTACTAATATCGAATGATGC
TGACGCCATTAGGCTGGAACTGTTTGTTGAGCTTGATTAACAGCGGTGAG
AAGTGA
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Coding sequence (CDS) from alignment at MCQH01000006:991810..992665+

>ATCC10864_000357-T1 ID=ATCC10864_000357-T1|Name=ATCC10864_000357-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2610bp|location=Sequence derived from alignment at MCQH01000006:991810..992665+ (Aspergillus niger ATCC 10864)
ATGCTCCGGTGGTATCAAGCGAGGTTGGCCAAGCAGCCTATCCTCACTGC
TAGTGTGACGAGTGCTCTGTTGTTTGGTAGTGGAGATGTTCTAGCCCAAC
AACTAGTCGATCGTAAGGGATTTGATAAGCACGACCTGGCAAGAACGGGA
CGCATGGCCCTTTATGGTGGAGCGATCTTCGGGCCGGCTGCTACCACCTG
GTACGGTGTTCTCCAGCGTCACGTCGTCCTGAATAACGCCAAAACTACCC
TCATTGCCCGTGTCATCGCGGATCAATGTGTCTTCACTCCCGCACACCTT
ACTTGTTTCTTGTCCTCCATGGCTATCATGGAAGGCACCGATCCGATCGA
GAAGTGGCGCAATGGTTTCGTTCCCAGCTTCAAAGCAAACCTTGCGATTT
GGCCTCTCGTTCAAGGAGTCAACTTTGCCATCGTGCCACTTGAGTACCGC
GTGCTTTTTGTCAACCTAGTCGCTTTGGGCTGGAACTGTTTGTTGAGCTT
GATTAACAGCGGTGAGAAGTGAATGCTCCGGTGGTATCAAGCGAGGTTGG
CCAAGCAGCCTATCCTCACTGCTAGTGTGACGAGTGCTCTGTTGTTTGGT
AGTGGAGATGTTCTAGCCCAACAACTAGTCGATCGTAAGGGATTTGATAA
GCACGACCTGGCAAGAACGGGACGCATGGCCCTTTATGGTGGAGCGATCT
TCGGGCCGGCTGCTACCACCTGGTACGGTGTTCTCCAGCGTCACGTCGTC
CTGAATAACGCCAAAACTACCCTCATTGCCCGTGTCATCGCGGATCAATG
TGTCTTCACTCCCGCACACCTTACTTGTTTCTTGTCCTCCATGGCTATCA
TGGAAGGCACCGATCCGATCGAGAAGTGGCGCAATGGTTTCGTTCCCAGC
TTCAAAGCAAACCTTGCGATTTGGCCTCTCGTTCAAGGAGTCAACTTTGC
CATCGTGCCACTTGAGTACCGCGTGCTTTTTGTCAACCTAGTCGCTTTGG
GCTGGAACTGTTTGTTGAGCTTGATTAACAGCGGTGAGAAGTGAATGCTC
CGGTGGTATCAAGCGAGGTTGGCCAAGCAGCCTATCCTCACTGCTAGTGT
GACGAGTGCTCTGTTGTTTGGTAGTGGAGATGTTCTAGCCCAACAACTAG
TCGATCGTAAGGGATTTGATAAGCACGACCTGGCAAGAACGGGACGCATG
GCCCTTTATGGTGGAGCGATCTTCGGGCCGGCTGCTACCACCTGGTACGG
TGTTCTCCAGCGTCACGTCGTCCTGAATAACGCCAAAACTACCCTCATTG
CCCGTGTCATCGCGGATCAATGTGTCTTCACTCCCGCACACCTTACTTGT
TTCTTGTCCTCCATGGCTATCATGGAAGGCACCGATCCGATCGAGAAGTG
GCGCAATGGTTTCGTTCCCAGCTTCAAAGCAAACCTTGCGATTTGGCCTC
TCGTTCAAGGAGTCAACTTTGCCATCGTGCCACTTGAGTACCGCGTGCTT
TTTGTCAACCTAGTCGCTTTGGGCTGGAACTGTTTGTTGAGCTTGATTAA
CAGCGGTGAGAAGTGAATGCTCCGGTGGTATCAAGCGAGGTTGGCCAAGC
AGCCTATCCTCACTGCTAGTGTGACGAGTGCTCTGTTGTTTGGTAGTGGA
GATGTTCTAGCCCAACAACTAGTCGATCGTAAGGGATTTGATAAGCACGA
CCTGGCAAGAACGGGACGCATGGCCCTTTATGGTGGAGCGATCTTCGGGC
CGGCTGCTACCACCTGGTACGGTGTTCTCCAGCGTCACGTCGTCCTGAAT
AACGCCAAAACTACCCTCATTGCCCGTGTCATCGCGGATCAATGTGTCTT
CACTCCCGCACACCTTACTTGTTTCTTGTCCTCCATGGCTATCATGGAAG
GCACCGATCCGATCGAGAAGTGGCGCAATGGTTTCGTTCCCAGCTTCAAA
GCAAACCTTGCGATTTGGCCTCTCGTTCAAGGAGTCAACTTTGCCATCGT
GCCACTTGAGTACCGCGTGCTTTTTGTCAACCTAGTCGCTTTGGGCTGGA
ACTGTTTGTTGAGCTTGATTAACAGCGGTGAGAAGTGAATGCTCCGGTGG
TATCAAGCGAGGTTGGCCAAGCAGCCTATCCTCACTGCTAGTGTGACGAG
TGCTCTGTTGTTTGGTAGTGGAGATGTTCTAGCCCAACAACTAGTCGATC
GTAAGGGATTTGATAAGCACGACCTGGCAAGAACGGGACGCATGGCCCTT
TATGGTGGAGCGATCTTCGGGCCGGCTGCTACCACCTGGTACGGTGTTCT
CCAGCGTCACGTCGTCCTGAATAACGCCAAAACTACCCTCATTGCCCGTG
TCATCGCGGATCAATGTGTCTTCACTCCCGCACACCTTACTTGTTTCTTG
TCCTCCATGGCTATCATGGAAGGCACCGATCCGATCGAGAAGTGGCGCAA
TGGTTTCGTTCCCAGCTTCAAAGCAAACCTTGCGATTTGGCCTCTCGTTC
AAGGAGTCAACTTTGCCATCGTGCCACTTGAGTACCGCGTGCTTTTTGTC
AACCTAGTCGCTTTGGGCTGGAACTGTTTGTTGAGCTTGATTAACAGCGG
TGAGAAGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SYM1_1ATCC10864_000357Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_000357-T1ATCC10864_000357-T1-proteinAspergillus niger ATCC 10864polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_000357-T1.exon1ATCC10864_000357-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_000357-T1.exon2ATCC10864_000357-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_000357-T1.exon3ATCC10864_000357-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_000357-T1.exon4ATCC10864_000357-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_000357-T1.exon5ATCC10864_000357-T1.exon5Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_000357-T1.cdsATCC10864_000357-T1.cdsAspergillus niger ATCC 10864CDS


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR007248
PFAMPF04117
Properties
Property NameValue
ProductProtein required for ethanol metabolism
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000006supercontigMCQH01000006:991810..992665 +
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