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Sequences
The following sequences are available for this feature:
mRNA from alignment at MCQH01000009:39357..41725+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC10864_000436-T1 ID=ATCC10864_000436-T1|Name=ATCC10864_000436-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=2369bp|location=Sequence derived from alignment at MCQH01000009:39357..41725+ (Aspergillus niger ATCC 10864)
ATGATCGGGTCTGCCCATGCTGTGGTGGCCCTGGGCCTTTTTACGTTATA
CGGTCATTCTGCAGCAGGTCCCGCAACTGGGGCTTCAAATTCACAGAGTA
TGTCCTGCCGGGGGTGAGGGATGCTACTGCAGCGCTTGATCTTCATTCGG
AATGTAAGCTGACCAAACAGCGATCGTTACGAATGGCACTAGTTTCGCAT
TGAACGGCGACAATGTCTCATATCGATTCCATGTCAACAGTACCACCGGC
GACTTGATTTCTGATCATTTTGGTGGTGTCGTCTCCGGCACAATCCCTTC
GCCAGTGGAACCTGCTGTCAACGGCTGGGTCGGCATGCCTGGTCGAATCC
GCCGGGAGTTCCCCGACCAAGGCCGTGGGGATTTCCGCATTCCCGCCGTT
CGTATTCGGGAATCGGCAGGTTATACTGTTAGCGATCTCCAATATGTGTC
GCACGAGGTGATCGAAGGTAAAAATGCTTTGCCTGGCTTGCCTGCTACAT
TTGGCGATGCGCAGGACGCCACAACTTTGGTAGTCCATCTGTATGACAAC
TATAGCTCCGTCGCGGCCGACTTGTCATACTCCATATTTCCGAAATATGA
TGCGATCGTGAGGAGTGTCAATGTGACCAACCAGGGCCCGGGTAATATCA
CTATCGAGGCCCTTGCAAGCATAAGTATCGATTTCCCCTATGAAGACCTC
GACATGGTCAGCCTCCGAGGCGACTGGGCCAGAGAGGCGAATGTTCAGAG
AAGCAAAGTGCAGTATGGCGTCCAGGGGTAAGTCAGCATAGTAAAAACCG
ACAGTGTGACCTTGCTGACAGGGGAGTAGATTCGGAAGCAGTACTGGATA
TTCCTCTCACCTTCACAATCCCTTCCTTGCCATAGTAGATCCAGTTACTA
CCGAATCGCAAGGCGAGGCATGGGGTTTCAACCTTGTATATACCGGCTCT
TTCTCAGCCCAAGTAGAGAAAGGATCGCAAGGTTTCACCCGGGCGCTGCT
CGGCTTCAACCCGGACCAATTATCGTGGAACCTTGGCCCTGGCGAGACTT
TAACCTCCCCTGAGTGTGTTGCAGTCTACTCGGACAAAGGCCTTGGCTCA
GTGTCTCGCAAATTCCACCGGCTATATCGCAACCACCTCATGAAGAGCAA
GTTCGCCACGTCCGACCGGCCGGTTCTGCTGAATAGCTGGGAAGGAGTTT
ATTTCGACTACAATCAAAGCAGCATCGAAACTCTTGCCGAAGAGTCCGCT
GCCCTGGGTGTCCACCTCTTTGTCATGGACGACGGCTGGTTTGGGGACAA
GTACCCTCGAGTGTCCGATAATGCCGGACTGGGCGACTGGATGCCCAATC
CAGCGCGCTTCCCGGACGGGTTGACCCCGGTCGTGCAAGACATCACAAAT
CTCACCGTCAATGGCACAGAGTCCACAAAACTTCGCTTTGGTATTTGGGT
GGAGCCCGAGATGGTCAACCCCAATTCCACTCTCTACCACGAACACCCGG
AGTGGGCGCTTCATGCCGGGCCTTACCCCCGTACCGAGCGTCGGAACCAG
CTCGTCCTCAACCTGGCGCTTCCGGCTGTGCAGGACTTCATCATAGACTT
CATGACGAACCTGTTACAAGATACCGGCATTTCCTACGTCAAATGGGACA
ACAACCGGGGGATACACGAGACGCCCTCTCCGTCGACTGACCATCAGTAC
ATGCTTGGCCTCTACCGGGTGTTCGACACACTGACCACCCGTTTTCCGGA
TGTTCTGTGGGAAGGATGTGCCTCGGGCGGCGGCCGCTTTGATGCTGGCA
TGCTGCAGTATGTCCCCCAGATCTGGACTTCCGACAACACCGACGCCATC
GACCGAATCACCATCCAATTTGGGACCTCGCTTGCCTACCCGCCATCAGC
AATGGGAGCCCATCTCTCCGCGGTTCCTAATGCACAGACCGGTCGCACTG
TGCCCTTTACTTTCCGCGCACACGTTGCTATGATGGGTGGTTCTTTCGGC
TTGGAGCTGGATCCGGCGACGGTGGAAGGGGACGAAATAGTCCCCGAGCT
TCTTGCGCTGGCGGAAAAAGTGAACCCTATCATTTTGAACGGAGATCTGT
ATCGGCTACGCCTACCTCAAGACTCCCAGTGGCCTGCCGCACTCTTTGTG
TCTCAGGATGGCGCACAGGCTGTTCTGTTCTACTTCCAGGTCCAGCCGAA
TGTCAACCATGCCGTGCCGTGGGTCAGGCTGCAGGGGTTGGACCCTAAGG
CGGACTATACCGTTGATGGAGATCAGACGTATTCCGGGGCAACACTAATG
AATCTGGGGTTGCAGTATAGTTTTGACACCGAGTATGGTAGCAAGGTAGT
TTTCCTGGAGAGGCAATGA back to topCoding sequence (CDS) from alignment at MCQH01000009:39357..41725+ >ATCC10864_000436-T1 ID=ATCC10864_000436-T1|Name=ATCC10864_000436-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=6732bp|location=Sequence derived from alignment at MCQH01000009:39357..41725+ (Aspergillus niger ATCC 10864)
ATGATCGGGTCTGCCCATGCTGTGGTGGCCCTGGGCCTTTTTACGTTATA
CGGTCATTCTGCAGCAGGTCCCGCAACTGGGGCTTCAAATTCACAGACGA
TCGTTACGAATGGCACTAGTTTCGCATTGAACGGCGACAATGTCTCATAT
CGATTCCATGTCAACAGTACCACCGGCGACTTGATTTCTGATCATTTTGG
TGGTGTCGTCTCCGGCACAATCCCTTCGCCAGTGGAACCTGCTGTCAACG
GCTGGGTCGGCATGCCTGGTCGAATCCGCCGGGAGTTCCCCGACCAAGGC
CGTGGGGATTTCCGCATTCCCGCCGTTCGTATTCGGGAATCGGCAGGTTA
TACTGTTAGCGATCTCCAATATGTGTCGCACGAGGTGATCGAAGGTAAAA
ATGCTTTGCCTGGCTTGCCTGCTACATTTGGCGATGCGCAGGACGCCACA
ACTTTGGTAGTCCATCTGTATGACAACTATAGCTCCGTCGCGGCCGACTT
GTCATACTCCATATTTCCGAAATATGATGCGATCGTGAGGAGTGTCAATG
TGACCAACCAGGGCCCGGGTAATATCACTATCGAGGCCCTTGCAAGCATA
AGTATCGATTTCCCCTATGAAGACCTCGACATGGTCAGCCTCCGAGGCGA
CTGGGCCAGAGAGGCGAATGTTCAGAGAAGCAAAGTGCAGTATGGCGTCC
AGGGATTCGGAAGCAGTACTGGATATTCCTCTCACCTTCACAATCCCTTC
CTTGCCATAGTAGATCCAGTTACTACCGAATCGCAAGGCGAGGCATGGGG
TTTCAACCTTGTATATACCGGCTCTTTCTCAGCCCAAGTAGAGAAAGGAT
CGCAAGGTTTCACCCGGGCGCTGCTCGGCTTCAACCCGGACCAATTATCG
TGGAACCTTGGCCCTGGCGAGACTTTAACCTCCCCTGAGTGTGTTGCAGT
CTACTCGGACAAAGGCCTTGGCTCAGTGTCTCGCAAATTCCACCGGCTAT
ATCGCAACCACCTCATGAAGAGCAAGTTCGCCACGTCCGACCGGCCGGTT
CTGCTGAATAGCTGGGAAGGAGTTTATTTCGACTACAATCAAAGCAGCAT
CGAAACTCTTGCCGAAGAGTCCGCTGCCCTGGGTGTCCACCTCTTTGTCA
TGGACGACGGCTGGTTTGGGGACAAGTACCCTCGAGTGTCCGATAATGCC
GGACTGGGCGACTGGATGCCCAATCCAGCGCGCTTCCCGGACGGGTTGAC
CCCGGTCGTGCAAGACATCACAAATCTCACCGTCAATGGCACAGAGTCCA
CAAAACTTCGCTTTGGTATTTGGGTGGAGCCCGAGATGGTCAACCCCAAT
TCCACTCTCTACCACGAACACCCGGAGTGGGCGCTTCATGCCGGGCCTTA
CCCCCGTACCGAGCGTCGGAACCAGCTCGTCCTCAACCTGGCGCTTCCGG
CTGTGCAGGACTTCATCATAGACTTCATGACGAACCTGTTACAAGATACC
GGCATTTCCTACGTCAAATGGGACAACAACCGGGGGATACACGAGACGCC
CTCTCCGTCGACTGACCATCAGTACATGCTTGGCCTCTACCGGGTGTTCG
ACACACTGACCACCCGTTTTCCGGATGTTCTGTGGGAAGGATGTGCCTCG
GGCGGCGGCCGCTTTGATGCTGGCATGCTGCAGTATGTCCCCCAGATCTG
GACTTCCGACAACACCGACGCCATCGACCGAATCACCATCCAATTTGGGA
CCTCGCTTGCCTACCCGCCATCAGCAATGGGAGCCCATCTCTCCGCGGTT
CCTAATGCACAGACCGGTCGCACTGTGCCCTTTACTTTCCGCGCACACGT
TGCTATGATGGGTGGTTCTTTCGGCTTGGAGCTGGATCCGGCGACGGTGG
AAGGGGACGAAATAGTCCCCGAGCTTCTTGCGCTGGCGGAAAAAGTGAAC
CCTATCATTTTGAACGGAGATCTGTATCGGCTACGCCTACCTCAAGACTC
CCAGTGGCCTGCCGCACTCTTTGTGTCTCAGGATGGCGCACAGGCTGTTC
TGTTCTACTTCCAGGTCCAGCCGAATGTCAACCATGCCGTGCCGTGGGTC
AGGCTGCAGGGGTTGGACCCTAAGGCGGACTATACCGTTGATGGAGATCA
GACGTATTCCGGGGCAACACTAATGAATCTGGGGTTGCAGTATAGTTTTG
ACACCGAGTATGGTAGCAAGGTAGTTTTCCTGGAGAGGCAATGAATGATC
GGGTCTGCCCATGCTGTGGTGGCCCTGGGCCTTTTTACGTTATACGGTCA
TTCTGCAGCAGGTCCCGCAACTGGGGCTTCAAATTCACAGACGATCGTTA
CGAATGGCACTAGTTTCGCATTGAACGGCGACAATGTCTCATATCGATTC
CATGTCAACAGTACCACCGGCGACTTGATTTCTGATCATTTTGGTGGTGT
CGTCTCCGGCACAATCCCTTCGCCAGTGGAACCTGCTGTCAACGGCTGGG
TCGGCATGCCTGGTCGAATCCGCCGGGAGTTCCCCGACCAAGGCCGTGGG
GATTTCCGCATTCCCGCCGTTCGTATTCGGGAATCGGCAGGTTATACTGT
TAGCGATCTCCAATATGTGTCGCACGAGGTGATCGAAGGTAAAAATGCTT
TGCCTGGCTTGCCTGCTACATTTGGCGATGCGCAGGACGCCACAACTTTG
GTAGTCCATCTGTATGACAACTATAGCTCCGTCGCGGCCGACTTGTCATA
CTCCATATTTCCGAAATATGATGCGATCGTGAGGAGTGTCAATGTGACCA
ACCAGGGCCCGGGTAATATCACTATCGAGGCCCTTGCAAGCATAAGTATC
GATTTCCCCTATGAAGACCTCGACATGGTCAGCCTCCGAGGCGACTGGGC
CAGAGAGGCGAATGTTCAGAGAAGCAAAGTGCAGTATGGCGTCCAGGGAT
TCGGAAGCAGTACTGGATATTCCTCTCACCTTCACAATCCCTTCCTTGCC
ATAGTAGATCCAGTTACTACCGAATCGCAAGGCGAGGCATGGGGTTTCAA
CCTTGTATATACCGGCTCTTTCTCAGCCCAAGTAGAGAAAGGATCGCAAG
GTTTCACCCGGGCGCTGCTCGGCTTCAACCCGGACCAATTATCGTGGAAC
CTTGGCCCTGGCGAGACTTTAACCTCCCCTGAGTGTGTTGCAGTCTACTC
GGACAAAGGCCTTGGCTCAGTGTCTCGCAAATTCCACCGGCTATATCGCA
ACCACCTCATGAAGAGCAAGTTCGCCACGTCCGACCGGCCGGTTCTGCTG
AATAGCTGGGAAGGAGTTTATTTCGACTACAATCAAAGCAGCATCGAAAC
TCTTGCCGAAGAGTCCGCTGCCCTGGGTGTCCACCTCTTTGTCATGGACG
ACGGCTGGTTTGGGGACAAGTACCCTCGAGTGTCCGATAATGCCGGACTG
GGCGACTGGATGCCCAATCCAGCGCGCTTCCCGGACGGGTTGACCCCGGT
CGTGCAAGACATCACAAATCTCACCGTCAATGGCACAGAGTCCACAAAAC
TTCGCTTTGGTATTTGGGTGGAGCCCGAGATGGTCAACCCCAATTCCACT
CTCTACCACGAACACCCGGAGTGGGCGCTTCATGCCGGGCCTTACCCCCG
TACCGAGCGTCGGAACCAGCTCGTCCTCAACCTGGCGCTTCCGGCTGTGC
AGGACTTCATCATAGACTTCATGACGAACCTGTTACAAGATACCGGCATT
TCCTACGTCAAATGGGACAACAACCGGGGGATACACGAGACGCCCTCTCC
GTCGACTGACCATCAGTACATGCTTGGCCTCTACCGGGTGTTCGACACAC
TGACCACCCGTTTTCCGGATGTTCTGTGGGAAGGATGTGCCTCGGGCGGC
GGCCGCTTTGATGCTGGCATGCTGCAGTATGTCCCCCAGATCTGGACTTC
CGACAACACCGACGCCATCGACCGAATCACCATCCAATTTGGGACCTCGC
TTGCCTACCCGCCATCAGCAATGGGAGCCCATCTCTCCGCGGTTCCTAAT
GCACAGACCGGTCGCACTGTGCCCTTTACTTTCCGCGCACACGTTGCTAT
GATGGGTGGTTCTTTCGGCTTGGAGCTGGATCCGGCGACGGTGGAAGGGG
ACGAAATAGTCCCCGAGCTTCTTGCGCTGGCGGAAAAAGTGAACCCTATC
ATTTTGAACGGAGATCTGTATCGGCTACGCCTACCTCAAGACTCCCAGTG
GCCTGCCGCACTCTTTGTGTCTCAGGATGGCGCACAGGCTGTTCTGTTCT
ACTTCCAGGTCCAGCCGAATGTCAACCATGCCGTGCCGTGGGTCAGGCTG
CAGGGGTTGGACCCTAAGGCGGACTATACCGTTGATGGAGATCAGACGTA
TTCCGGGGCAACACTAATGAATCTGGGGTTGCAGTATAGTTTTGACACCG
AGTATGGTAGCAAGGTAGTTTTCCTGGAGAGGCAATGAATGATCGGGTCT
GCCCATGCTGTGGTGGCCCTGGGCCTTTTTACGTTATACGGTCATTCTGC
AGCAGGTCCCGCAACTGGGGCTTCAAATTCACAGACGATCGTTACGAATG
GCACTAGTTTCGCATTGAACGGCGACAATGTCTCATATCGATTCCATGTC
AACAGTACCACCGGCGACTTGATTTCTGATCATTTTGGTGGTGTCGTCTC
CGGCACAATCCCTTCGCCAGTGGAACCTGCTGTCAACGGCTGGGTCGGCA
TGCCTGGTCGAATCCGCCGGGAGTTCCCCGACCAAGGCCGTGGGGATTTC
CGCATTCCCGCCGTTCGTATTCGGGAATCGGCAGGTTATACTGTTAGCGA
TCTCCAATATGTGTCGCACGAGGTGATCGAAGGTAAAAATGCTTTGCCTG
GCTTGCCTGCTACATTTGGCGATGCGCAGGACGCCACAACTTTGGTAGTC
CATCTGTATGACAACTATAGCTCCGTCGCGGCCGACTTGTCATACTCCAT
ATTTCCGAAATATGATGCGATCGTGAGGAGTGTCAATGTGACCAACCAGG
GCCCGGGTAATATCACTATCGAGGCCCTTGCAAGCATAAGTATCGATTTC
CCCTATGAAGACCTCGACATGGTCAGCCTCCGAGGCGACTGGGCCAGAGA
GGCGAATGTTCAGAGAAGCAAAGTGCAGTATGGCGTCCAGGGATTCGGAA
GCAGTACTGGATATTCCTCTCACCTTCACAATCCCTTCCTTGCCATAGTA
GATCCAGTTACTACCGAATCGCAAGGCGAGGCATGGGGTTTCAACCTTGT
ATATACCGGCTCTTTCTCAGCCCAAGTAGAGAAAGGATCGCAAGGTTTCA
CCCGGGCGCTGCTCGGCTTCAACCCGGACCAATTATCGTGGAACCTTGGC
CCTGGCGAGACTTTAACCTCCCCTGAGTGTGTTGCAGTCTACTCGGACAA
AGGCCTTGGCTCAGTGTCTCGCAAATTCCACCGGCTATATCGCAACCACC
TCATGAAGAGCAAGTTCGCCACGTCCGACCGGCCGGTTCTGCTGAATAGC
TGGGAAGGAGTTTATTTCGACTACAATCAAAGCAGCATCGAAACTCTTGC
CGAAGAGTCCGCTGCCCTGGGTGTCCACCTCTTTGTCATGGACGACGGCT
GGTTTGGGGACAAGTACCCTCGAGTGTCCGATAATGCCGGACTGGGCGAC
TGGATGCCCAATCCAGCGCGCTTCCCGGACGGGTTGACCCCGGTCGTGCA
AGACATCACAAATCTCACCGTCAATGGCACAGAGTCCACAAAACTTCGCT
TTGGTATTTGGGTGGAGCCCGAGATGGTCAACCCCAATTCCACTCTCTAC
CACGAACACCCGGAGTGGGCGCTTCATGCCGGGCCTTACCCCCGTACCGA
GCGTCGGAACCAGCTCGTCCTCAACCTGGCGCTTCCGGCTGTGCAGGACT
TCATCATAGACTTCATGACGAACCTGTTACAAGATACCGGCATTTCCTAC
GTCAAATGGGACAACAACCGGGGGATACACGAGACGCCCTCTCCGTCGAC
TGACCATCAGTACATGCTTGGCCTCTACCGGGTGTTCGACACACTGACCA
CCCGTTTTCCGGATGTTCTGTGGGAAGGATGTGCCTCGGGCGGCGGCCGC
TTTGATGCTGGCATGCTGCAGTATGTCCCCCAGATCTGGACTTCCGACAA
CACCGACGCCATCGACCGAATCACCATCCAATTTGGGACCTCGCTTGCCT
ACCCGCCATCAGCAATGGGAGCCCATCTCTCCGCGGTTCCTAATGCACAG
ACCGGTCGCACTGTGCCCTTTACTTTCCGCGCACACGTTGCTATGATGGG
TGGTTCTTTCGGCTTGGAGCTGGATCCGGCGACGGTGGAAGGGGACGAAA
TAGTCCCCGAGCTTCTTGCGCTGGCGGAAAAAGTGAACCCTATCATTTTG
AACGGAGATCTGTATCGGCTACGCCTACCTCAAGACTCCCAGTGGCCTGC
CGCACTCTTTGTGTCTCAGGATGGCGCACAGGCTGTTCTGTTCTACTTCC
AGGTCCAGCCGAATGTCAACCATGCCGTGCCGTGGGTCAGGCTGCAGGGG
TTGGACCCTAAGGCGGACTATACCGTTGATGGAGATCAGACGTATTCCGG
GGCAACACTAATGAATCTGGGGTTGCAGTATAGTTTTGACACCGAGTATG
GTAGCAAGGTAGTTTTCCTGGAGAGGCAATGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0003824 | catalytic activity |
| GO:0004557 | alpha-galactosidase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0016052 | carbohydrate catabolic process |
| GO:0005975 | carbohydrate metabolic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Cross References
External references for this mRNA
| Database | Accession |
|---|
| InterPro | IPR000111 |
| PFAM | PF16875 |
| InterPro | IPR013780 |
| PFAM | PF02065 |
| InterPro | IPR031704 |
| PFAM | PF16874 |
| InterPro | IPR013785 |
| InterPro | IPR002252 |
| InterPro | IPR038417 |
| InterPro | IPR017853 |
| InterPro | IPR031705 |
Properties
| Property Name | Value |
|---|
| Note | CAZy:GH36 |
| Note | SECRETED:SignalP(1-22) |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| MCQH01000009 | supercontig | MCQH01000009:39357..41725 + |
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