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ATCC10864_000519-T1, ATCC10864_000519-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_000519-T1
Unique NameATCC10864_000519-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000014:36915..38046-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_000519-T1 ID=ATCC10864_000519-T1|Name=ATCC10864_000519-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1132bp|location=Sequence derived from alignment at MCQH01000014:36915..38046- (Aspergillus niger ATCC 10864)
ATGTGGCTCATTAACTGGTGTAGGTAGTCTCCTGTTTTGCCATCCGCCGA
CTTGGCCCCGATCAGGTGGTCTGCAGACCTGCCCTGCACGCTCTTGGATC
CATTGGATCCTCATCGTTTCTCTTCTGTTCACAGTGTCTCTCGTATGCCA
ATTTACTGATTTATCTTTTCCGAATAGTCTACGATCTCCTGGCCTCCCTT
GGCCTGCTCAACAAGCACGCCAAGCTCCTGTTCCTCGGTCTCGATAATGC
CGGAAAGACGACCCTCCTGCACATGCTGAAGGTATGTGAGCTTCCTTTAG
TCGCAGGCAAGCTCTGCTTTGATGGCAACAATGGTGGATATGGTATCGCC
TGGGATCGACTCCGATCGCAAGGGAATGCCACCACGGCAGGGATAGAGCC
GCGAGAGATGTGGACGATAAGCTAACATCTGTGTTTGATAATAGAACGAC
CGGGTTGCCATCCTCCAGCCCACTGCTCACCCGAGTACGTATCACCCGCA
CGAACATGCCAGCGAGGGACTATTCGACAGCGACCGAGGAGAATCGATTT
TCATGAACATGGGCTAACCGCACTCCTTGAATACAGCATCCGAAGAACTC
GCCATCGGCAACAACCGCTTCACGACCTTCGACCTGGGTGGTCACCAGCA
GGGTGAGTAACACACCTCGTAGCCCCGTGGTATAGATCGAAACAAGAAAA
CTAAATGTAGCAATTCTTGTTAAATAGCTCGTCGTCTGTGGAAGGACTAC
TTCCCCGAAGTTAGCGGTATCGTCTTCCTCGTTGACGCCAAGGACCACGA
GCGTTTCCCCGAGTCCAAGGCCGAGCTCGACGCTCTCCTTGCCATGGAGG
AGCTGGCTAAGGTTCCTTTCCTGATCCTCGGAAACAAGATCGACCACCCG
GATGCTGTTAGCGAGGATGAGCTGCGCCACCAGCTTGGATTGTACCAGAC
CACGGGTAAGGGCAAGGTTCCTCTCGAGGGAATCCGGCCCATTGAGGTGT
TCATGTGCAGTGTTGTCATGAGACAGGGTGAGTGGGATTTTTCATATCCA
AACCAATGTCGACCAGGAGCTAATCGTTCTGTGCCTTGTAGGATACGGTG
AAGGTATCAGATGGCTGTCTCAATACGTCTAA
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Coding sequence (CDS) from alignment at MCQH01000014:36915..38046-

>ATCC10864_000519-T1 ID=ATCC10864_000519-T1|Name=ATCC10864_000519-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3420bp|location=Sequence derived from alignment at MCQH01000014:36915..38046- (Aspergillus niger ATCC 10864)
GATACGGTGAAGGTATCAGATGGCTGTCTCAATACGTCTAACTCGTCGTC
TGTGGAAGGACTACTTCCCCGAAGTTAGCGGTATCGTCTTCCTCGTTGAC
GCCAAGGACCACGAGCGTTTCCCCGAGTCCAAGGCCGAGCTCGACGCTCT
CCTTGCCATGGAGGAGCTGGCTAAGGTTCCTTTCCTGATCCTCGGAAACA
AGATCGACCACCCGGATGCTGTTAGCGAGGATGAGCTGCGCCACCAGCTT
GGATTGTACCAGACCACGGGTAAGGGCAAGGTTCCTCTCGAGGGAATCCG
GCCCATTGAGGTGTTCATGTGCAGTGTTGTCATGAGACAGGCATCCGAAG
AACTCGCCATCGGCAACAACCGCTTCACGACCTTCGACCTGGGTGGTCAC
CAGCAGGAACGACCGGGTTGCCATCCTCCAGCCCACTGCTCACCCGATCT
ACGATCTCCTGGCCTCCCTTGGCCTGCTCAACAAGCACGCCAAGCTCCTG
TTCCTCGGTCTCGATAATGCCGGAAAGACGACCCTCCTGCACATGCTGAA
GATGTGGCTCATTAACTGGTGATACGGTGAAGGTATCAGATGGCTGTCTC
AATACGTCTAACTCGTCGTCTGTGGAAGGACTACTTCCCCGAAGTTAGCG
GTATCGTCTTCCTCGTTGACGCCAAGGACCACGAGCGTTTCCCCGAGTCC
AAGGCCGAGCTCGACGCTCTCCTTGCCATGGAGGAGCTGGCTAAGGTTCC
TTTCCTGATCCTCGGAAACAAGATCGACCACCCGGATGCTGTTAGCGAGG
ATGAGCTGCGCCACCAGCTTGGATTGTACCAGACCACGGGTAAGGGCAAG
GTTCCTCTCGAGGGAATCCGGCCCATTGAGGTGTTCATGTGCAGTGTTGT
CATGAGACAGGCATCCGAAGAACTCGCCATCGGCAACAACCGCTTCACGA
CCTTCGACCTGGGTGGTCACCAGCAGGAACGACCGGGTTGCCATCCTCCA
GCCCACTGCTCACCCGATCTACGATCTCCTGGCCTCCCTTGGCCTGCTCA
ACAAGCACGCCAAGCTCCTGTTCCTCGGTCTCGATAATGCCGGAAAGACG
ACCCTCCTGCACATGCTGAAGATGTGGCTCATTAACTGGTGATACGGTGA
AGGTATCAGATGGCTGTCTCAATACGTCTAACTCGTCGTCTGTGGAAGGA
CTACTTCCCCGAAGTTAGCGGTATCGTCTTCCTCGTTGACGCCAAGGACC
ACGAGCGTTTCCCCGAGTCCAAGGCCGAGCTCGACGCTCTCCTTGCCATG
GAGGAGCTGGCTAAGGTTCCTTTCCTGATCCTCGGAAACAAGATCGACCA
CCCGGATGCTGTTAGCGAGGATGAGCTGCGCCACCAGCTTGGATTGTACC
AGACCACGGGTAAGGGCAAGGTTCCTCTCGAGGGAATCCGGCCCATTGAG
GTGTTCATGTGCAGTGTTGTCATGAGACAGGCATCCGAAGAACTCGCCAT
CGGCAACAACCGCTTCACGACCTTCGACCTGGGTGGTCACCAGCAGGAAC
GACCGGGTTGCCATCCTCCAGCCCACTGCTCACCCGATCTACGATCTCCT
GGCCTCCCTTGGCCTGCTCAACAAGCACGCCAAGCTCCTGTTCCTCGGTC
TCGATAATGCCGGAAAGACGACCCTCCTGCACATGCTGAAGATGTGGCTC
ATTAACTGGTGATACGGTGAAGGTATCAGATGGCTGTCTCAATACGTCTA
ACTCGTCGTCTGTGGAAGGACTACTTCCCCGAAGTTAGCGGTATCGTCTT
CCTCGTTGACGCCAAGGACCACGAGCGTTTCCCCGAGTCCAAGGCCGAGC
TCGACGCTCTCCTTGCCATGGAGGAGCTGGCTAAGGTTCCTTTCCTGATC
CTCGGAAACAAGATCGACCACCCGGATGCTGTTAGCGAGGATGAGCTGCG
CCACCAGCTTGGATTGTACCAGACCACGGGTAAGGGCAAGGTTCCTCTCG
AGGGAATCCGGCCCATTGAGGTGTTCATGTGCAGTGTTGTCATGAGACAG
GCATCCGAAGAACTCGCCATCGGCAACAACCGCTTCACGACCTTCGACCT
GGGTGGTCACCAGCAGGAACGACCGGGTTGCCATCCTCCAGCCCACTGCT
CACCCGATCTACGATCTCCTGGCCTCCCTTGGCCTGCTCAACAAGCACGC
CAAGCTCCTGTTCCTCGGTCTCGATAATGCCGGAAAGACGACCCTCCTGC
ACATGCTGAAGATGTGGCTCATTAACTGGTGATACGGTGAAGGTATCAGA
TGGCTGTCTCAATACGTCTAACTCGTCGTCTGTGGAAGGACTACTTCCCC
GAAGTTAGCGGTATCGTCTTCCTCGTTGACGCCAAGGACCACGAGCGTTT
CCCCGAGTCCAAGGCCGAGCTCGACGCTCTCCTTGCCATGGAGGAGCTGG
CTAAGGTTCCTTTCCTGATCCTCGGAAACAAGATCGACCACCCGGATGCT
GTTAGCGAGGATGAGCTGCGCCACCAGCTTGGATTGTACCAGACCACGGG
TAAGGGCAAGGTTCCTCTCGAGGGAATCCGGCCCATTGAGGTGTTCATGT
GCAGTGTTGTCATGAGACAGGCATCCGAAGAACTCGCCATCGGCAACAAC
CGCTTCACGACCTTCGACCTGGGTGGTCACCAGCAGGAACGACCGGGTTG
CCATCCTCCAGCCCACTGCTCACCCGATCTACGATCTCCTGGCCTCCCTT
GGCCTGCTCAACAAGCACGCCAAGCTCCTGTTCCTCGGTCTCGATAATGC
CGGAAAGACGACCCTCCTGCACATGCTGAAGATGTGGCTCATTAACTGGT
GATACGGTGAAGGTATCAGATGGCTGTCTCAATACGTCTAACTCGTCGTC
TGTGGAAGGACTACTTCCCCGAAGTTAGCGGTATCGTCTTCCTCGTTGAC
GCCAAGGACCACGAGCGTTTCCCCGAGTCCAAGGCCGAGCTCGACGCTCT
CCTTGCCATGGAGGAGCTGGCTAAGGTTCCTTTCCTGATCCTCGGAAACA
AGATCGACCACCCGGATGCTGTTAGCGAGGATGAGCTGCGCCACCAGCTT
GGATTGTACCAGACCACGGGTAAGGGCAAGGTTCCTCTCGAGGGAATCCG
GCCCATTGAGGTGTTCATGTGCAGTGTTGTCATGAGACAGGCATCCGAAG
AACTCGCCATCGGCAACAACCGCTTCACGACCTTCGACCTGGGTGGTCAC
CAGCAGGAACGACCGGGTTGCCATCCTCCAGCCCACTGCTCACCCGATCT
ACGATCTCCTGGCCTCCCTTGGCCTGCTCAACAAGCACGCCAAGCTCCTG
TTCCTCGGTCTCGATAATGCCGGAAAGACGACCCTCCTGCACATGCTGAA
GATGTGGCTCATTAACTGGT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006886intracellular protein transport
Vocabulary: Molecular Function
TermDefinition
GO:0003924GTPase activity
GO:0005525GTP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SAR1ATCC10864_000519Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_000519-T1ATCC10864_000519-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_000519-T1.cdsATCC10864_000519-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_000519-T1.exon6ATCC10864_000519-T1.exon6Aspergillus niger ATCC 10864exon
ATCC10864_000519-T1.exon5ATCC10864_000519-T1.exon5Aspergillus niger ATCC 10864exon
ATCC10864_000519-T1.exon4ATCC10864_000519-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_000519-T1.exon3ATCC10864_000519-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_000519-T1.exon2ATCC10864_000519-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_000519-T1.exon1ATCC10864_000519-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF09439
InterProIPR027417
PFAMPF00025
PFAMPF00071
PFAMPF08477
PFAMPF01926
InterProIPR005225
InterProIPR006689
InterProIPR006687
Properties
Property NameValue
ProductCOPII coat GTPase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000014supercontigMCQH01000014:36915..38046 -
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