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ATCC10864_000529-T1, ATCC10864_000529-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_000529-T1
Unique NameATCC10864_000529-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000014:76938..77355+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_000529-T1 ID=ATCC10864_000529-T1|Name=ATCC10864_000529-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=418bp|location=Sequence derived from alignment at MCQH01000014:76938..77355+ (Aspergillus niger ATCC 10864)
ATGACCTCCGGTGCTGAGTCCGGTCCCGACTCCAAGTCTGCTGGCGCTGG
CACCGGCGCCTCTGCTGTCTCCTCCGTCAACCGCCCTTCCTCTCCTACTC
CTCCTGGTGGTCCCCGGGCTGCTATGCGTCGCCGCGCGGCCGCTGACCAC
AAGGAGTCCCTCCGCAATGCCAGACCCAGCTCGACTCGCGCCGCCGGTGC
TGGTGGCTCCTCCGGCACGATGCTCAAGCTCTACACTGACGAGAGCCCCG
GTCTGAGGGTTGACCCCGTTGTTGTCCTGGTTCTCAGTCTGGGCTTCATT
TTCTCCGTCGTTGGTCTCCACGGTAAGTGTGCTTTCCGGGTTGTCTTCTG
GGTGGTGAAGTGGCCTCTAACGCGCATATCCAGTCATTGCCAAGATCACC
CGCAAGTTCTCCTCATAA
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Coding sequence (CDS) from alignment at MCQH01000014:76938..77355+

>ATCC10864_000529-T1 ID=ATCC10864_000529-T1|Name=ATCC10864_000529-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=714bp|location=Sequence derived from alignment at MCQH01000014:76938..77355+ (Aspergillus niger ATCC 10864)
ATGACCTCCGGTGCTGAGTCCGGTCCCGACTCCAAGTCTGCTGGCGCTGG
CACCGGCGCCTCTGCTGTCTCCTCCGTCAACCGCCCTTCCTCTCCTACTC
CTCCTGGTGGTCCCCGGGCTGCTATGCGTCGCCGCGCGGCCGCTGACCAC
AAGGAGTCCCTCCGCAATGCCAGACCCAGCTCGACTCGCGCCGCCGGTGC
TGGTGGCTCCTCCGGCACGATGCTCAAGCTCTACACTGACGAGAGCCCCG
GTCTGAGGGTTGACCCCGTTGTTGTCCTGGTTCTCAGTCTGGGCTTCATT
TTCTCCGTCGTTGGTCTCCACGTCATTGCCAAGATCACCCGCAAGTTCTC
CTCATAAATGACCTCCGGTGCTGAGTCCGGTCCCGACTCCAAGTCTGCTG
GCGCTGGCACCGGCGCCTCTGCTGTCTCCTCCGTCAACCGCCCTTCCTCT
CCTACTCCTCCTGGTGGTCCCCGGGCTGCTATGCGTCGCCGCGCGGCCGC
TGACCACAAGGAGTCCCTCCGCAATGCCAGACCCAGCTCGACTCGCGCCG
CCGGTGCTGGTGGCTCCTCCGGCACGATGCTCAAGCTCTACACTGACGAG
AGCCCCGGTCTGAGGGTTGACCCCGTTGTTGTCCTGGTTCTCAGTCTGGG
CTTCATTTTCTCCGTCGTTGGTCTCCACGTCATTGCCAAGATCACCCGCA
AGTTCTCCTCATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006886intracellular protein transport
Vocabulary: Cellular Component
TermDefinition
GO:0005784Sec61 translocon complex
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SBH1ATCC10864_000529Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_000529-T1.exon1ATCC10864_000529-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_000529-T1.exon2ATCC10864_000529-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_000529-T1.cdsATCC10864_000529-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_000529-T1ATCC10864_000529-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF03911
InterProIPR016482
InterProIPR030671
Properties
Property NameValue
ProductArf guanine nucleotide exchange factor sbh1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000014supercontigMCQH01000014:76938..77355 +
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