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ATCC10864_000550-T1, ATCC10864_000550-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_000550-T1
Unique NameATCC10864_000550-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000015:16160..17735+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_000550-T1 ID=ATCC10864_000550-T1|Name=ATCC10864_000550-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1576bp|location=Sequence derived from alignment at MCQH01000015:16160..17735+ (Aspergillus niger ATCC 10864)
ATGGCACCTATAGCGTTGAAAATCCTCCTCTTTACCTCTCTCATTGTCCC
TTCCATCTCGCTATCCGACCAAGCGAGGAATGGTCATGCAAGAACCATAT
GCGAAGTCAAACCAGGCGGATCCTCAGAAATTGATGATGTGCCTGCAATT
GTCGACGCGTTGACTACCTGTGGTTCCGGTGGTCGGGTGATATTCTCAAA
TAACACTTATCATATCAACTCCGTTATGAACACGACATGGCTCGATGATG
TGGAGATTGATCTACAGGGTACACTCTTGGTAAATAAATTACCTATGTAT
GTAATATTAGTTTCTTGTTTGTTTCTGACAATGACAGTGGAGCACCAACA
TCTCCTACTGGCTTAACCACTCCCTCCCCGTCGGCTACCAGAATCAATCC
ACTGCCTGGATCTTGGGTGGCAAAGACATTGTCTTTGAAGGACATGGATA
CGGAACATTCAATGGAAGTGGCCAAACCTGGTATAAATATGTTGGATCGA
CGTCGAATTACCCACGGCGACCGAACCAGCTGACGGTCTCGGGAGCAATG
GGCGCAGTCTTCAAGGGGTTGCGATTCGTGCAGAGCCAGATGTGGTAGGT
ATCGTTATTCATATTGCGCCATCTTGCTAAATGAATGCATGTAGCTAACA
ATACAGGACAATGTCTATCATTCACACCTCGAACTCGTGGTTCGATTCCA
TCTACGTGAACAATCTGTATGATGACGGCGATTCAGCACGTTAGTACCGT
TCCGCATGTTGAATCGGGATGCAAGTCACGCCTCTGACCCTATTTAAATA
GAGAACACCGACGGTGCAAATACTATCTACAGCAAAAACATCACATTCAC
GAACTGGGAAGTCGTCAACGGTGATGATAGTATCAGCACGAAAGCCAATT
CTACAGATATCACGATCGCAAACTGCACCTTCACTAGCGGCCTAGGCATT
GCCATCGGGAGTATTGGCCAATATAATGGTGCTTTTGAGACTGTTGAACG
CCTTAAAATCTCAAACATCACATATGAGAAGACAACTCATGCCGTGTACT
TCAAGACCTGGACGGGTGACCAGGTCGGATACCCGCCTAATGGAGGCGGC
GGGGGTTTGGGATGTACGTCCACGTAACTTTATCCAAGTCCTTTGTTGAT
TTTAACCATACTACCATGGCAGATGCATCCGACATCGTCGCAACCAACTT
GAAGACCAACAACCTCAAGGGTGCTCCTTTTACAATCTCTCAGTGTACGA
CGTTCTCTGGTGCTTCAGGGAACTGCACCAATTCCAAATTTCAGATTCGC
GATCTTGTCTTCACCGATATCTCTGGAACGACAGACTCCTCAGATGTTGC
GAGCTTTCAGTGTAGTGCTGTTGCCCCGTGTGAAGATATTACTATCGAGA
ATGTAAGTTTGCGAATAGCGGGGAATACGACCCATGCAGAAGAGTATCTG
TGTGGGAATGTGGATGGGACCGTTGGGTTCGAATGCACTGGAGATGTGTG
TGTTGGGTCAAGTGCTACTGGGGGATGTTAGCCTAGCAAACAGGTTCTCG
TTGAGGCGCTTCAAGATTTCCGGTAG
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Coding sequence (CDS) from alignment at MCQH01000015:16160..17735+

>ATCC10864_000550-T1 ID=ATCC10864_000550-T1|Name=ATCC10864_000550-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=7236bp|location=Sequence derived from alignment at MCQH01000015:16160..17735+ (Aspergillus niger ATCC 10864)
ATGGCACCTATAGCGTTGAAAATCCTCCTCTTTACCTCTCTCATTGTCCC
TTCCATCTCGCTATCCGACCAAGCGAGGAATGGTCATGCAAGAACCATAT
GCGAAGTCAAACCAGGCGGATCCTCAGAAATTGATGATGTGCCTGCAATT
GTCGACGCGTTGACTACCTGTGGTTCCGGTGGTCGGGTGATATTCTCAAA
TAACACTTATCATATCAACTCCGTTATGAACACGACATGGCTCGATGATG
TGGAGATTGATCTACAGGGTACACTCTTGTGGAGCACCAACATCTCCTAC
TGGCTTAACCACTCCCTCCCCGTCGGCTACCAGAATCAATCCACTGCCTG
GATCTTGGGTGGCAAAGACATTGTCTTTGAAGGACATGGATACGGAACAT
TCAATGGAAGTGGCCAAACCTGGTATAAATATGTTGGATCGACGTCGAAT
TACCCACGGCGACCGAACCAGCTGACGGTCTCGGGAGCAATGGGCGCAGT
CTTCAAGGGGTTGCGATTCGTGCAGAGCCAGATGTGGACAATGTCTATCA
TTCACACCTCGAACTCGTGGTTCGATTCCATCTACGTGAACAATCTGTAT
GATGACGGCGATTCAGCACAGAACACCGACGGTGCAAATACTATCTACAG
CAAAAACATCACATTCACGAACTGGGAAGTCGTCAACGGTGATGATAGTA
TCAGCACGAAAGCCAATTCTACAGATATCACGATCGCAAACTGCACCTTC
ACTAGCGGCCTAGGCATTGCCATCGGGAGTATTGGCCAATATAATGGTGC
TTTTGAGACTGTTGAACGCCTTAAAATCTCAAACATCACATATGAGAAGA
CAACTCATGCCGTGTACTTCAAGACCTGGACGGGTGACCAGGTCGGATAC
CCGCCTAATGGAGGCGGCGGGGGTTTGGGATATGCATCCGACATCGTCGC
AACCAACTTGAAGACCAACAACCTCAAGGGTGCTCCTTTTACAATCTCTC
AGTGTACGACGTTCTCTGGTGCTTCAGGGAACTGCACCAATTCCAAATTT
CAGATTCGCGATCTTGTCTTCACCGATATCTCTGGAACGACAGACTCCTC
AGATGTTGCGAGCTTTCAGTGTAGTGCTGTTGCCCCGTGTGAAGATATTA
CTATCGAGAATCCTAGCAAACAGGTTCTCGTTGAGGCGCTTCAAGATTTC
CGGTAGATGGCACCTATAGCGTTGAAAATCCTCCTCTTTACCTCTCTCAT
TGTCCCTTCCATCTCGCTATCCGACCAAGCGAGGAATGGTCATGCAAGAA
CCATATGCGAAGTCAAACCAGGCGGATCCTCAGAAATTGATGATGTGCCT
GCAATTGTCGACGCGTTGACTACCTGTGGTTCCGGTGGTCGGGTGATATT
CTCAAATAACACTTATCATATCAACTCCGTTATGAACACGACATGGCTCG
ATGATGTGGAGATTGATCTACAGGGTACACTCTTGTGGAGCACCAACATC
TCCTACTGGCTTAACCACTCCCTCCCCGTCGGCTACCAGAATCAATCCAC
TGCCTGGATCTTGGGTGGCAAAGACATTGTCTTTGAAGGACATGGATACG
GAACATTCAATGGAAGTGGCCAAACCTGGTATAAATATGTTGGATCGACG
TCGAATTACCCACGGCGACCGAACCAGCTGACGGTCTCGGGAGCAATGGG
CGCAGTCTTCAAGGGGTTGCGATTCGTGCAGAGCCAGATGTGGACAATGT
CTATCATTCACACCTCGAACTCGTGGTTCGATTCCATCTACGTGAACAAT
CTGTATGATGACGGCGATTCAGCACAGAACACCGACGGTGCAAATACTAT
CTACAGCAAAAACATCACATTCACGAACTGGGAAGTCGTCAACGGTGATG
ATAGTATCAGCACGAAAGCCAATTCTACAGATATCACGATCGCAAACTGC
ACCTTCACTAGCGGCCTAGGCATTGCCATCGGGAGTATTGGCCAATATAA
TGGTGCTTTTGAGACTGTTGAACGCCTTAAAATCTCAAACATCACATATG
AGAAGACAACTCATGCCGTGTACTTCAAGACCTGGACGGGTGACCAGGTC
GGATACCCGCCTAATGGAGGCGGCGGGGGTTTGGGATATGCATCCGACAT
CGTCGCAACCAACTTGAAGACCAACAACCTCAAGGGTGCTCCTTTTACAA
TCTCTCAGTGTACGACGTTCTCTGGTGCTTCAGGGAACTGCACCAATTCC
AAATTTCAGATTCGCGATCTTGTCTTCACCGATATCTCTGGAACGACAGA
CTCCTCAGATGTTGCGAGCTTTCAGTGTAGTGCTGTTGCCCCGTGTGAAG
ATATTACTATCGAGAATCCTAGCAAACAGGTTCTCGTTGAGGCGCTTCAA
GATTTCCGGTAGATGGCACCTATAGCGTTGAAAATCCTCCTCTTTACCTC
TCTCATTGTCCCTTCCATCTCGCTATCCGACCAAGCGAGGAATGGTCATG
CAAGAACCATATGCGAAGTCAAACCAGGCGGATCCTCAGAAATTGATGAT
GTGCCTGCAATTGTCGACGCGTTGACTACCTGTGGTTCCGGTGGTCGGGT
GATATTCTCAAATAACACTTATCATATCAACTCCGTTATGAACACGACAT
GGCTCGATGATGTGGAGATTGATCTACAGGGTACACTCTTGTGGAGCACC
AACATCTCCTACTGGCTTAACCACTCCCTCCCCGTCGGCTACCAGAATCA
ATCCACTGCCTGGATCTTGGGTGGCAAAGACATTGTCTTTGAAGGACATG
GATACGGAACATTCAATGGAAGTGGCCAAACCTGGTATAAATATGTTGGA
TCGACGTCGAATTACCCACGGCGACCGAACCAGCTGACGGTCTCGGGAGC
AATGGGCGCAGTCTTCAAGGGGTTGCGATTCGTGCAGAGCCAGATGTGGA
CAATGTCTATCATTCACACCTCGAACTCGTGGTTCGATTCCATCTACGTG
AACAATCTGTATGATGACGGCGATTCAGCACAGAACACCGACGGTGCAAA
TACTATCTACAGCAAAAACATCACATTCACGAACTGGGAAGTCGTCAACG
GTGATGATAGTATCAGCACGAAAGCCAATTCTACAGATATCACGATCGCA
AACTGCACCTTCACTAGCGGCCTAGGCATTGCCATCGGGAGTATTGGCCA
ATATAATGGTGCTTTTGAGACTGTTGAACGCCTTAAAATCTCAAACATCA
CATATGAGAAGACAACTCATGCCGTGTACTTCAAGACCTGGACGGGTGAC
CAGGTCGGATACCCGCCTAATGGAGGCGGCGGGGGTTTGGGATATGCATC
CGACATCGTCGCAACCAACTTGAAGACCAACAACCTCAAGGGTGCTCCTT
TTACAATCTCTCAGTGTACGACGTTCTCTGGTGCTTCAGGGAACTGCACC
AATTCCAAATTTCAGATTCGCGATCTTGTCTTCACCGATATCTCTGGAAC
GACAGACTCCTCAGATGTTGCGAGCTTTCAGTGTAGTGCTGTTGCCCCGT
GTGAAGATATTACTATCGAGAATCCTAGCAAACAGGTTCTCGTTGAGGCG
CTTCAAGATTTCCGGTAGATGGCACCTATAGCGTTGAAAATCCTCCTCTT
TACCTCTCTCATTGTCCCTTCCATCTCGCTATCCGACCAAGCGAGGAATG
GTCATGCAAGAACCATATGCGAAGTCAAACCAGGCGGATCCTCAGAAATT
GATGATGTGCCTGCAATTGTCGACGCGTTGACTACCTGTGGTTCCGGTGG
TCGGGTGATATTCTCAAATAACACTTATCATATCAACTCCGTTATGAACA
CGACATGGCTCGATGATGTGGAGATTGATCTACAGGGTACACTCTTGTGG
AGCACCAACATCTCCTACTGGCTTAACCACTCCCTCCCCGTCGGCTACCA
GAATCAATCCACTGCCTGGATCTTGGGTGGCAAAGACATTGTCTTTGAAG
GACATGGATACGGAACATTCAATGGAAGTGGCCAAACCTGGTATAAATAT
GTTGGATCGACGTCGAATTACCCACGGCGACCGAACCAGCTGACGGTCTC
GGGAGCAATGGGCGCAGTCTTCAAGGGGTTGCGATTCGTGCAGAGCCAGA
TGTGGACAATGTCTATCATTCACACCTCGAACTCGTGGTTCGATTCCATC
TACGTGAACAATCTGTATGATGACGGCGATTCAGCACAGAACACCGACGG
TGCAAATACTATCTACAGCAAAAACATCACATTCACGAACTGGGAAGTCG
TCAACGGTGATGATAGTATCAGCACGAAAGCCAATTCTACAGATATCACG
ATCGCAAACTGCACCTTCACTAGCGGCCTAGGCATTGCCATCGGGAGTAT
TGGCCAATATAATGGTGCTTTTGAGACTGTTGAACGCCTTAAAATCTCAA
ACATCACATATGAGAAGACAACTCATGCCGTGTACTTCAAGACCTGGACG
GGTGACCAGGTCGGATACCCGCCTAATGGAGGCGGCGGGGGTTTGGGATA
TGCATCCGACATCGTCGCAACCAACTTGAAGACCAACAACCTCAAGGGTG
CTCCTTTTACAATCTCTCAGTGTACGACGTTCTCTGGTGCTTCAGGGAAC
TGCACCAATTCCAAATTTCAGATTCGCGATCTTGTCTTCACCGATATCTC
TGGAACGACAGACTCCTCAGATGTTGCGAGCTTTCAGTGTAGTGCTGTTG
CCCCGTGTGAAGATATTACTATCGAGAATCCTAGCAAACAGGTTCTCGTT
GAGGCGCTTCAAGATTTCCGGTAGATGGCACCTATAGCGTTGAAAATCCT
CCTCTTTACCTCTCTCATTGTCCCTTCCATCTCGCTATCCGACCAAGCGA
GGAATGGTCATGCAAGAACCATATGCGAAGTCAAACCAGGCGGATCCTCA
GAAATTGATGATGTGCCTGCAATTGTCGACGCGTTGACTACCTGTGGTTC
CGGTGGTCGGGTGATATTCTCAAATAACACTTATCATATCAACTCCGTTA
TGAACACGACATGGCTCGATGATGTGGAGATTGATCTACAGGGTACACTC
TTGTGGAGCACCAACATCTCCTACTGGCTTAACCACTCCCTCCCCGTCGG
CTACCAGAATCAATCCACTGCCTGGATCTTGGGTGGCAAAGACATTGTCT
TTGAAGGACATGGATACGGAACATTCAATGGAAGTGGCCAAACCTGGTAT
AAATATGTTGGATCGACGTCGAATTACCCACGGCGACCGAACCAGCTGAC
GGTCTCGGGAGCAATGGGCGCAGTCTTCAAGGGGTTGCGATTCGTGCAGA
GCCAGATGTGGACAATGTCTATCATTCACACCTCGAACTCGTGGTTCGAT
TCCATCTACGTGAACAATCTGTATGATGACGGCGATTCAGCACAGAACAC
CGACGGTGCAAATACTATCTACAGCAAAAACATCACATTCACGAACTGGG
AAGTCGTCAACGGTGATGATAGTATCAGCACGAAAGCCAATTCTACAGAT
ATCACGATCGCAAACTGCACCTTCACTAGCGGCCTAGGCATTGCCATCGG
GAGTATTGGCCAATATAATGGTGCTTTTGAGACTGTTGAACGCCTTAAAA
TCTCAAACATCACATATGAGAAGACAACTCATGCCGTGTACTTCAAGACC
TGGACGGGTGACCAGGTCGGATACCCGCCTAATGGAGGCGGCGGGGGTTT
GGGATATGCATCCGACATCGTCGCAACCAACTTGAAGACCAACAACCTCA
AGGGTGCTCCTTTTACAATCTCTCAGTGTACGACGTTCTCTGGTGCTTCA
GGGAACTGCACCAATTCCAAATTTCAGATTCGCGATCTTGTCTTCACCGA
TATCTCTGGAACGACAGACTCCTCAGATGTTGCGAGCTTTCAGTGTAGTG
CTGTTGCCCCGTGTGAAGATATTACTATCGAGAATCCTAGCAAACAGGTT
CTCGTTGAGGCGCTTCAAGATTTCCGGTAGATGGCACCTATAGCGTTGAA
AATCCTCCTCTTTACCTCTCTCATTGTCCCTTCCATCTCGCTATCCGACC
AAGCGAGGAATGGTCATGCAAGAACCATATGCGAAGTCAAACCAGGCGGA
TCCTCAGAAATTGATGATGTGCCTGCAATTGTCGACGCGTTGACTACCTG
TGGTTCCGGTGGTCGGGTGATATTCTCAAATAACACTTATCATATCAACT
CCGTTATGAACACGACATGGCTCGATGATGTGGAGATTGATCTACAGGGT
ACACTCTTGTGGAGCACCAACATCTCCTACTGGCTTAACCACTCCCTCCC
CGTCGGCTACCAGAATCAATCCACTGCCTGGATCTTGGGTGGCAAAGACA
TTGTCTTTGAAGGACATGGATACGGAACATTCAATGGAAGTGGCCAAACC
TGGTATAAATATGTTGGATCGACGTCGAATTACCCACGGCGACCGAACCA
GCTGACGGTCTCGGGAGCAATGGGCGCAGTCTTCAAGGGGTTGCGATTCG
TGCAGAGCCAGATGTGGACAATGTCTATCATTCACACCTCGAACTCGTGG
TTCGATTCCATCTACGTGAACAATCTGTATGATGACGGCGATTCAGCACA
GAACACCGACGGTGCAAATACTATCTACAGCAAAAACATCACATTCACGA
ACTGGGAAGTCGTCAACGGTGATGATAGTATCAGCACGAAAGCCAATTCT
ACAGATATCACGATCGCAAACTGCACCTTCACTAGCGGCCTAGGCATTGC
CATCGGGAGTATTGGCCAATATAATGGTGCTTTTGAGACTGTTGAACGCC
TTAAAATCTCAAACATCACATATGAGAAGACAACTCATGCCGTGTACTTC
AAGACCTGGACGGGTGACCAGGTCGGATACCCGCCTAATGGAGGCGGCGG
GGGTTTGGGATATGCATCCGACATCGTCGCAACCAACTTGAAGACCAACA
ACCTCAAGGGTGCTCCTTTTACAATCTCTCAGTGTACGACGTTCTCTGGT
GCTTCAGGGAACTGCACCAATTCCAAATTTCAGATTCGCGATCTTGTCTT
CACCGATATCTCTGGAACGACAGACTCCTCAGATGTTGCGAGCTTTCAGT
GTAGTGCTGTTGCCCCGTGTGAAGATATTACTATCGAGAATCCTAGCAAA
CAGGTTCTCGTTGAGGCGCTTCAAGATTTCCGGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004650polygalacturonase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_000550ATCC10864_000550Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_000550-T1ATCC10864_000550-T1-proteinAspergillus niger ATCC 10864polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_000550-T1.exon1ATCC10864_000550-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_000550-T1.exon2ATCC10864_000550-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_000550-T1.exon3ATCC10864_000550-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_000550-T1.exon4ATCC10864_000550-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_000550-T1.exon5ATCC10864_000550-T1.exon5Aspergillus niger ATCC 10864exon
ATCC10864_000550-T1.exon6ATCC10864_000550-T1.exon6Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_000550-T1.cdsATCC10864_000550-T1.cdsAspergillus niger ATCC 10864CDS


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR000743
InterProIPR012334
InterProIPR011050
PFAMPF00295
Properties
Property NameValue
NoteCAZy:GH28
NoteSECRETED:SignalP(1-20)
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000015supercontigMCQH01000015:16160..17735 +
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