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ATCC10864_000592-T1, ATCC10864_000592-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_000592-T1
Unique NameATCC10864_000592-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000015:120636..123665-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_000592-T1 ID=ATCC10864_000592-T1|Name=ATCC10864_000592-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=3030bp|location=Sequence derived from alignment at MCQH01000015:120636..123665- (Aspergillus niger ATCC 10864)
ATGAATGAGGAAGGGGCCAGCAATTATGAAATGTCACACTCCCGCAGTCA
ACCCTCACAACAAGAGTCAAATCTGGATGAGAAATACCCAAACCGTCCTC
ATAATCACTCCCAGACATTGCCCTTTCACGAGCTCTTTGAGACCCTCTTC
AATCCGTTGAGTGAGCTCTCCAAGAAGCCTGCAGGCACCGCCGCTCCTCG
GCGAAAAGTCGGGCCTCATGGCCAGTCGGCGGCGAACCTTACCCCACACG
AAAAGCGACGGGATGTCATTGAGCGGTTCATCTCACGATGGCGGAAAGAG
GTGGGGGATGATATCTACCCTGCGTTTCGGCTGATTCTTCCGGACAAAGA
TCGCGACCGGGCCATGTACGGTATCAAAGAAAAGGCCATCGGAAAGCTAC
TCGTCAAAATTATGAAGATCGACAAGAATTCGGATGACGGCTTCAATCTT
TTGAACTGGAAGCTGCCAGGCCAGTTGGCTACCTCGCGCTTTATGGCGGG
GGATTTTGCGAGACGCTGCTACGATGTTATCTCAAAACGGCCAATGAGGA
CAGAGGTGGGAAATATGTCCATTGAGGAGGTGAATGACAGGCTCGACCAG
CTTTCAAATGCCTCGAAGGAGGAGCAGCAGCTACCCATCTTGTCGGAGTT
TTACCGAAAAATGAACCCCGAGGAGCTGCTGTGGCTGATCCGCATTATCC
TTCGACAGATGAAAGTCGGGGCTACAGAGCGAACCTTATTCAATGTATGG
CACCCAGATGCTGCAAACCTCTATAGCATATCCAGTAGCCTTCAACGTGT
TTGTTGGGAGCTGCATGATCCGAACATTCGGCTTGGGGCTGAAAACAGCG
GCATTTCTCTGATGCAATGCTTCCAGCCCCAGCTAGCTCAGTTTCAGATG
CAGTCCCTTGATCGAATGATTGCCCGAATGCGGGGTACCGAAGAAGACCC
GGTATTCTGGATCGAGGAGAAGCTCGACGGGGAACGTATGCAGCTTCATA
TGGAGACTGACAGCTCGGTGCCGGGAGGAAAGAAGTTTCGCTTCTGGTCG
AGGAAAGCGAAGGATTACACCTATCTCTATGGAAAGAGCCTTGAGGACCC
CAATGGTGCCTTGGCCCGACATCTCAAAGACGCCTTTGCAGATGGGGTCA
ACAGTTTGATCCTGGACGGGGAAATGATTGCTTGGAATCCCGAGCAGGGC
GCCCCCGAACCATTTGGCACCTTAAAAACTGCCGCATTAGCTGAACAGAG
AAATCCGTTCTCAAACGGATCGCGGCCGCTTTTTCGTGTGTTTGATCTAC
TCTTGCTGAATGGGCACAATTTGACCAGGTACACTCTTCGCGATCGTCGA
AATGCCCTGCAGAAGAGTGTAAAGTCAGTTCACCGTCGGTTCGAAATCCA
TCCTTACGAGGAGGCTACAGACAAGGCCCAGATCGAAGCAGCGCTTCGAA
AAGTTGTTGCGGAGGCTTCTGAGGGACTAGTAGTCAAAAATCCAAGGTCA
CCATATCGCCTCAATGAACGACATGACGACTGGATGAAAGTGAAGCCTGA
GTACATGACAGAGTTTGGGGAGTCCCTGGATCTGATTGTCATAGGCGGCT
ATTACGGCAGTGGTCATCGAGGAGGGGGTCTTTCAAGCTTCCTATGTGGA
TTAAGGGCCGATAATGCCAGCTCTTCGCAAGGGATAGGGGCAACCAAATG
CTATTCTTTCTGCAAGGTCGGAGGAGGCTTTACAGCAGCAGACTATGCGA
ATATCCGTCATCATACTGATGGGAAATGGGTGGACTGGAACCCGAGGAAA
CCACCAACGGCATACATTGAGCTGGCAGGTGGCAGTGCCCAGCACGAGCG
TCCAGATCAGTGGATCAAGCCAGAGGACTCGGTGGTACTCTGTGTTAAAG
CAGCATCGGTATCAGTCAGTGATCAATTTCGTGTCGGTTTAACATTGCGC
TTCCCGCGGTTCAAGAGGTTACGCATGGATAAAGACTGGAAGAGTGCGCT
TTCCATGCAAGAATTCCTGGATCTGAAGTCGAACGTGGAGAAAGAGCAAA
AGGAGAAGGAATTCAATGTAGAGAATTTCCGCAAGAAACGAGTGAAGCGA
CCAAAGAAGGCCTTGACAGTTGCAGGATACAGCCCGAATGCAGAGGTGAA
GTATGAAGGTCCGTCAGGGCATATTTTCGACGGGCTCAACTTCTTTATTT
TGACCGACTCGGTGGCCCCGAATAAGAAAACAAAGGCGGAGTTGGAACAA
CTTGTCAAATTGAATGGAGGCAAGATATATCAGACAAATAAGGCCGCTCC
CAACACCGTATGTATCGCGGATCGAAGAACTGTGAAAGCAGCCTCCTTGC
AAAAGAGTGGCGATGTGAGCCTAATCCGACCATCTTGGATCCTAGACTGT
GTGAGGCAGAACGAGATTGATGCGGGACTGCCAGACCTGCTTCTTCCCCT
GGAACCTAGGCACATGTTCTTCACAACGCCTAGCAAGGAGGAGGAGGTAT
TGACGAGTGTTGACCGGTTCAATGATAGCTACGCTCGGGATGTCACCAAG
GAAGAGCTGGTCAGCTTACTCGAAAAGATGAGCGCGGACAATGGTAGTTC
CGACGTGCCCCCGAGAGGCGAAGCCACCAAGAAGCTTAGGGAAGCTATTC
AAGAAAAAGTGGACTCAGGATGGGATCTCCCATGCGGGTGGCTTTTTCAG
AACTTGACGTTCTTCTTTCCCGACCGGACAACGCAGGATCCAGATCCCGG
AGAGCCCGAATATGCCGGCTGCGGCTATCGACTTTCTTTGGCTCGCAATA
CGGCCAAATTTGCAGGTGCTACCGTTGTCAATACTTATGAGGACCCTTCC
ATCACCCATGTGGTTGTAGATCCGGATACACCATCTTCGGAGATCGCCAC
GCTAAGGAAAACCTTGTCTCTCCGAGTGGACCAGAAACTTCCTCACATAG
TTACCACTGAATGGATTGAGGAGAGCTGGGAGCAGCAATCATTTCTTGAT
GAAGATAGATATCATCCAAGGCCAGCTTGA
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Coding sequence (CDS) from alignment at MCQH01000015:120636..123665-

>ATCC10864_000592-T1 ID=ATCC10864_000592-T1|Name=ATCC10864_000592-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3030bp|location=Sequence derived from alignment at MCQH01000015:120636..123665- (Aspergillus niger ATCC 10864)
ATGAATGAGGAAGGGGCCAGCAATTATGAAATGTCACACTCCCGCAGTCA
ACCCTCACAACAAGAGTCAAATCTGGATGAGAAATACCCAAACCGTCCTC
ATAATCACTCCCAGACATTGCCCTTTCACGAGCTCTTTGAGACCCTCTTC
AATCCGTTGAGTGAGCTCTCCAAGAAGCCTGCAGGCACCGCCGCTCCTCG
GCGAAAAGTCGGGCCTCATGGCCAGTCGGCGGCGAACCTTACCCCACACG
AAAAGCGACGGGATGTCATTGAGCGGTTCATCTCACGATGGCGGAAAGAG
GTGGGGGATGATATCTACCCTGCGTTTCGGCTGATTCTTCCGGACAAAGA
TCGCGACCGGGCCATGTACGGTATCAAAGAAAAGGCCATCGGAAAGCTAC
TCGTCAAAATTATGAAGATCGACAAGAATTCGGATGACGGCTTCAATCTT
TTGAACTGGAAGCTGCCAGGCCAGTTGGCTACCTCGCGCTTTATGGCGGG
GGATTTTGCGAGACGCTGCTACGATGTTATCTCAAAACGGCCAATGAGGA
CAGAGGTGGGAAATATGTCCATTGAGGAGGTGAATGACAGGCTCGACCAG
CTTTCAAATGCCTCGAAGGAGGAGCAGCAGCTACCCATCTTGTCGGAGTT
TTACCGAAAAATGAACCCCGAGGAGCTGCTGTGGCTGATCCGCATTATCC
TTCGACAGATGAAAGTCGGGGCTACAGAGCGAACCTTATTCAATGTATGG
CACCCAGATGCTGCAAACCTCTATAGCATATCCAGTAGCCTTCAACGTGT
TTGTTGGGAGCTGCATGATCCGAACATTCGGCTTGGGGCTGAAAACAGCG
GCATTTCTCTGATGCAATGCTTCCAGCCCCAGCTAGCTCAGTTTCAGATG
CAGTCCCTTGATCGAATGATTGCCCGAATGCGGGGTACCGAAGAAGACCC
GGTATTCTGGATCGAGGAGAAGCTCGACGGGGAACGTATGCAGCTTCATA
TGGAGACTGACAGCTCGGTGCCGGGAGGAAAGAAGTTTCGCTTCTGGTCG
AGGAAAGCGAAGGATTACACCTATCTCTATGGAAAGAGCCTTGAGGACCC
CAATGGTGCCTTGGCCCGACATCTCAAAGACGCCTTTGCAGATGGGGTCA
ACAGTTTGATCCTGGACGGGGAAATGATTGCTTGGAATCCCGAGCAGGGC
GCCCCCGAACCATTTGGCACCTTAAAAACTGCCGCATTAGCTGAACAGAG
AAATCCGTTCTCAAACGGATCGCGGCCGCTTTTTCGTGTGTTTGATCTAC
TCTTGCTGAATGGGCACAATTTGACCAGGTACACTCTTCGCGATCGTCGA
AATGCCCTGCAGAAGAGTGTAAAGTCAGTTCACCGTCGGTTCGAAATCCA
TCCTTACGAGGAGGCTACAGACAAGGCCCAGATCGAAGCAGCGCTTCGAA
AAGTTGTTGCGGAGGCTTCTGAGGGACTAGTAGTCAAAAATCCAAGGTCA
CCATATCGCCTCAATGAACGACATGACGACTGGATGAAAGTGAAGCCTGA
GTACATGACAGAGTTTGGGGAGTCCCTGGATCTGATTGTCATAGGCGGCT
ATTACGGCAGTGGTCATCGAGGAGGGGGTCTTTCAAGCTTCCTATGTGGA
TTAAGGGCCGATAATGCCAGCTCTTCGCAAGGGATAGGGGCAACCAAATG
CTATTCTTTCTGCAAGGTCGGAGGAGGCTTTACAGCAGCAGACTATGCGA
ATATCCGTCATCATACTGATGGGAAATGGGTGGACTGGAACCCGAGGAAA
CCACCAACGGCATACATTGAGCTGGCAGGTGGCAGTGCCCAGCACGAGCG
TCCAGATCAGTGGATCAAGCCAGAGGACTCGGTGGTACTCTGTGTTAAAG
CAGCATCGGTATCAGTCAGTGATCAATTTCGTGTCGGTTTAACATTGCGC
TTCCCGCGGTTCAAGAGGTTACGCATGGATAAAGACTGGAAGAGTGCGCT
TTCCATGCAAGAATTCCTGGATCTGAAGTCGAACGTGGAGAAAGAGCAAA
AGGAGAAGGAATTCAATGTAGAGAATTTCCGCAAGAAACGAGTGAAGCGA
CCAAAGAAGGCCTTGACAGTTGCAGGATACAGCCCGAATGCAGAGGTGAA
GTATGAAGGTCCGTCAGGGCATATTTTCGACGGGCTCAACTTCTTTATTT
TGACCGACTCGGTGGCCCCGAATAAGAAAACAAAGGCGGAGTTGGAACAA
CTTGTCAAATTGAATGGAGGCAAGATATATCAGACAAATAAGGCCGCTCC
CAACACCGTATGTATCGCGGATCGAAGAACTGTGAAAGCAGCCTCCTTGC
AAAAGAGTGGCGATGTGAGCCTAATCCGACCATCTTGGATCCTAGACTGT
GTGAGGCAGAACGAGATTGATGCGGGACTGCCAGACCTGCTTCTTCCCCT
GGAACCTAGGCACATGTTCTTCACAACGCCTAGCAAGGAGGAGGAGGTAT
TGACGAGTGTTGACCGGTTCAATGATAGCTACGCTCGGGATGTCACCAAG
GAAGAGCTGGTCAGCTTACTCGAAAAGATGAGCGCGGACAATGGTAGTTC
CGACGTGCCCCCGAGAGGCGAAGCCACCAAGAAGCTTAGGGAAGCTATTC
AAGAAAAAGTGGACTCAGGATGGGATCTCCCATGCGGGTGGCTTTTTCAG
AACTTGACGTTCTTCTTTCCCGACCGGACAACGCAGGATCCAGATCCCGG
AGAGCCCGAATATGCCGGCTGCGGCTATCGACTTTCTTTGGCTCGCAATA
CGGCCAAATTTGCAGGTGCTACCGTTGTCAATACTTATGAGGACCCTTCC
ATCACCCATGTGGTTGTAGATCCGGATACACCATCTTCGGAGATCGCCAC
GCTAAGGAAAACCTTGTCTCTCCGAGTGGACCAGAAACTTCCTCACATAG
TTACCACTGAATGGATTGAGGAGAGCTGGGAGCAGCAATCATTTCTTGAT
GAAGATAGATATCATCCAAGGCCAGCTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0003910DNA ligase (ATP) activity
GO:0003909DNA ligase activity
GO:0005524ATP binding
Vocabulary: Biological Process
TermDefinition
GO:0006281DNA repair
GO:0051103DNA ligation involved in DNA repair
GO:0006310DNA recombination
GO:0071897DNA biosynthetic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
LIG4ATCC10864_000592Aspergillus niger ATCC 10864gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_000592-T1.cdsATCC10864_000592-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_000592-T1.exon1ATCC10864_000592-T1.exon1Aspergillus niger ATCC 10864exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_000592-T1ATCC10864_000592-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR029710
PFAMPF04675
PFAMPF04679
PFAMPF16589
InterProIPR000977
InterProIPR012309
InterProIPR016059
InterProIPR012340
InterProIPR044125
InterProIPR012310
InterProIPR036599
InterProIPR001357
PFAMPF01068
PFAMPF09414
PFAMPF00533
InterProIPR012308
InterProIPR036420
Properties
Property NameValue
ProductDNA ligase (ATP)
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000015supercontigMCQH01000015:120636..123665 -
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