You are here

Home

ATCC10864_000621-T1, ATCC10864_000621-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_000621-T1
Unique NameATCC10864_000621-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000015:194311..196119-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_000621-T1 ID=ATCC10864_000621-T1|Name=ATCC10864_000621-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1809bp|location=Sequence derived from alignment at MCQH01000015:194311..196119- (Aspergillus niger ATCC 10864)
ATGCTACTTCCTCGTCTCTGGCTGGCGTGCCTCACGCTGCTCGTGGCTGG
GGCCGCTGCCGTCAAGGTCAATCCCTTACCAGCTCCACGCAACATCACCT
GGGCTTCGTCGGGCCCTAAGCAGCTGGCCGGCTTCGTCAGTCTCCGTGCT
TCCCAGGACACGTCTGATTTTATTCTGGCCAGTTAAGGGGACCGTGCTTG
GGATTCTATCGTCTCCCTGCAATGGGTACCTGCAGCGACCGAAGGTCCCG
TGCCATCTTTTCAACCCTTCCCCACCGGTACGGCCGGGGTCGCTAGAAGG
TCCTCGCAGGCACTGCCATCGCTCCAATTTGTCGATGTGAATGTGTTGGA
TATTGGCGCAGATCTCCAGCAAGGGGTGGACGAGTCTTACACCCTCGAAG
TCACCGAAAGTGCTACCTCGGTGGTCATTGAGGCTCCCACCGTGTGGGGG
GCGCTCCATGCCTTTACCACTCTCCAGCAGCTGGTCATCTCCGACGGACA
GGGGGGCTTGTTGATCGAGCAGCCCGTTAAGATTCAGGATGCCCCGCTCT
ATCCCTACCGAGGAATTATGCTTGATACTGGTCGAAACTTCATCTCGGTC
AACAAGATTTACGAGCAGCTGGACGGCATGTCCCTTTCAAAACTCAACGT
TCTACACTGGCACATGGAAGACACCCAATCGTGGCCCATAGAGATAGATG
CCTATCCAGAGATGATTCACGATGCATACTCCCCCCGCGAAGTGTTTTCG
CACGCTGACATGCGCAATGTCGTGGCCTACGCGCGAGCGCGTGGCGTGCG
GGTCATCCCAGAGATCGATATGCCCAGTCATTCTGCTTCCGGGTGGAAGC
AGGTCGACCCCCAGATGGTGACCTGCGTGGACTCCTGGTGGTCCAATGAC
GATTATTCCCTGCATACCGCGGTAGAGCCTCCGCCCGGCCAGATGGACAT
TATTTACAACGGCACGTACGATGTCGTCTGACAGGTCTACAACGAGCTGT
CCAACATCTTCCCAGACAACTGGTTCCATGTGGGGGCGGATGAGATCCAG
CCTAACTGTTTTAACTTCAGTAGCTATGTTACCGACTGGTTTACGCAGGA
TCCGTCGCGCACCTATAATGACCTGGCCCAATACTGGGTCGACCATGCCG
TGCCAATTTTCCAGAACTACAGTGCCTCGCGGCGATTGGTCATGTGGGAA
GATATTGTACTGTCAACAGAGCATGCGCATGATGTCCCTACGAACATCGT
CATGCAGACCTGGAACAACGGGCTGGACTACATCAACCAGCTGACCGCCA
AGGGCTACGACGTGATTGTATCATCGGCGGATTTTATGTATTTGGACTGC
GGGATGGGGGGCTTCCTAACGAATGATCCTCGCTACGATGTAATGAGTAA
TCCTGATGCAAGCACACCAAACTTCAACTACGGCGGCAACGGGGGCTCGT
GGTGTGCGCCGTACAAGACATGGCAGCGCATCTACGACTACGACTTCACG
CAGAACCTCACTGTTACCCAGGCCCAGCACATTGTAGGAGCAGAGGCGCC
GCTCTGGTCAGAGCAAGTGGATGATGTTACGGTATCCAGTCAATTTTGGC
CGCGTGCCGCTGCGCTGGCAGAGCTGGTGTGGTCTGGGAATCGTGATGAG
AACGGGCGGAAACGCACGACGCTGATGACCCAGCGCATCCTGAACTTCCG
CGAGTATCTGGTGGCCAACGGGGCTCAAGCGCAAGCGTTGGTTCCTAAGT
ACTGTGTGCAGCATCCGCATACCTGCGACTTGTATCTAAACCAGAGTGCG
ATTCAGTAA
back to top

Coding sequence (CDS) from alignment at MCQH01000015:194311..196119-

>ATCC10864_000621-T1 ID=ATCC10864_000621-T1|Name=ATCC10864_000621-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=5076bp|location=Sequence derived from alignment at MCQH01000015:194311..196119- (Aspergillus niger ATCC 10864)
GTCTACAACGAGCTGTCCAACATCTTCCCAGACAACTGGTTCCATGTGGG
GGCGGATGAGATCCAGCCTAACTGTTTTAACTTCAGTAGCTATGTTACCG
ACTGGTTTACGCAGGATCCGTCGCGCACCTATAATGACCTGGCCCAATAC
TGGGTCGACCATGCCGTGCCAATTTTCCAGAACTACAGTGCCTCGCGGCG
ATTGGTCATGTGGGAAGATATTGTACTGTCAACAGAGCATGCGCATGATG
TCCCTACGAACATCGTCATGCAGACCTGGAACAACGGGCTGGACTACATC
AACCAGCTGACCGCCAAGGGCTACGACGTGATTGTATCATCGGCGGATTT
TATGTATTTGGACTGCGGGATGGGGGGCTTCCTAACGAATGATCCTCGCT
ACGATGTAATGAGTAATCCTGATGCAAGCACACCAAACTTCAACTACGGC
GGCAACGGGGGCTCGTGGTGTGCGCCGTACAAGACATGGCAGCGCATCTA
CGACTACGACTTCACGCAGAACCTCACTGTTACCCAGGCCCAGCACATTG
TAGGAGCAGAGGCGCCGCTCTGGTCAGAGCAAGTGGATGATGTTACGGTA
TCCAGTCAATTTTGGCCGCGTGCCGCTGCGCTGGCAGAGCTGGTGTGGTC
TGGGAATCGTGATGAGAACGGGCGGAAACGCACGACGCTGATGACCCAGC
GCATCCTGAACTTCCGCGAGTATCTGGTGGCCAACGGGGCTCAAGCGCAA
GCGTTGGTTCCTAAGTACTGTGTGCAGCATCCGCATACCTGCGACTTGTA
TCTAAACCAGAGTGCGATTCAGTAACGACCGAAGGTCCCGTGCCATCTTT
TCAACCCTTCCCCACCGGTACGGCCGGGGTCGCTAGAAGGTCCTCGCAGG
CACTGCCATCGCTCCAATTTGTCGATGTGAATGTGTTGGATATTGGCGCA
GATCTCCAGCAAGGGGTGGACGAGTCTTACACCCTCGAAGTCACCGAAAG
TGCTACCTCGGTGGTCATTGAGGCTCCCACCGTGTGGGGGGCGCTCCATG
CCTTTACCACTCTCCAGCAGCTGGTCATCTCCGACGGACAGGGGGGCTTG
TTGATCGAGCAGCCCGTTAAGATTCAGGATGCCCCGCTCTATCCCTACCG
AGGAATTATGCTTGATACTGGTCGAAACTTCATCTCGGTCAACAAGATTT
ACGAGCAGCTGGACGGCATGTCCCTTTCAAAACTCAACGTTCTACACTGG
CACATGGAAGACACCCAATCGTGGCCCATAGAGATAGATGCCTATCCAGA
GATGATTCACGATGCATACTCCCCCCGCGAAGTGTTTTCGCACGCTGACA
TGCGCAATGTCGTGGCCTACGCGCGAGCGCGTGGCGTGCGGGTCATCCCA
GAGATCGATATGCCCAGTCATTCTGCTTCCGGGTGGAAGCAGGTCGACCC
CCAGATGGTGACCTGCGTGGACTCCTGGTGGTCCAATGACGATTATTCCC
TGCATACCGCGATGCTACTTCCTCGTCTCTGGCTGGCGTGCCTCACGCTG
CTCGTGGCTGGGGCCGCTGCCGTCAAGGTCAATCCCTTACCAGCTCCACG
CAACATCACCTGGGCTTCGTCGGGCCCTAAGCAGCTGGCCGGCTTCGTCA
GTCTCCGTGCTTCCCAGGACACGTCTGATTTTATTCTGGCCAGTCTACAA
CGAGCTGTCCAACATCTTCCCAGACAACTGGTTCCATGTGGGGGCGGATG
AGATCCAGCCTAACTGTTTTAACTTCAGTAGCTATGTTACCGACTGGTTT
ACGCAGGATCCGTCGCGCACCTATAATGACCTGGCCCAATACTGGGTCGA
CCATGCCGTGCCAATTTTCCAGAACTACAGTGCCTCGCGGCGATTGGTCA
TGTGGGAAGATATTGTACTGTCAACAGAGCATGCGCATGATGTCCCTACG
AACATCGTCATGCAGACCTGGAACAACGGGCTGGACTACATCAACCAGCT
GACCGCCAAGGGCTACGACGTGATTGTATCATCGGCGGATTTTATGTATT
TGGACTGCGGGATGGGGGGCTTCCTAACGAATGATCCTCGCTACGATGTA
ATGAGTAATCCTGATGCAAGCACACCAAACTTCAACTACGGCGGCAACGG
GGGCTCGTGGTGTGCGCCGTACAAGACATGGCAGCGCATCTACGACTACG
ACTTCACGCAGAACCTCACTGTTACCCAGGCCCAGCACATTGTAGGAGCA
GAGGCGCCGCTCTGGTCAGAGCAAGTGGATGATGTTACGGTATCCAGTCA
ATTTTGGCCGCGTGCCGCTGCGCTGGCAGAGCTGGTGTGGTCTGGGAATC
GTGATGAGAACGGGCGGAAACGCACGACGCTGATGACCCAGCGCATCCTG
AACTTCCGCGAGTATCTGGTGGCCAACGGGGCTCAAGCGCAAGCGTTGGT
TCCTAAGTACTGTGTGCAGCATCCGCATACCTGCGACTTGTATCTAAACC
AGAGTGCGATTCAGTAACGACCGAAGGTCCCGTGCCATCTTTTCAACCCT
TCCCCACCGGTACGGCCGGGGTCGCTAGAAGGTCCTCGCAGGCACTGCCA
TCGCTCCAATTTGTCGATGTGAATGTGTTGGATATTGGCGCAGATCTCCA
GCAAGGGGTGGACGAGTCTTACACCCTCGAAGTCACCGAAAGTGCTACCT
CGGTGGTCATTGAGGCTCCCACCGTGTGGGGGGCGCTCCATGCCTTTACC
ACTCTCCAGCAGCTGGTCATCTCCGACGGACAGGGGGGCTTGTTGATCGA
GCAGCCCGTTAAGATTCAGGATGCCCCGCTCTATCCCTACCGAGGAATTA
TGCTTGATACTGGTCGAAACTTCATCTCGGTCAACAAGATTTACGAGCAG
CTGGACGGCATGTCCCTTTCAAAACTCAACGTTCTACACTGGCACATGGA
AGACACCCAATCGTGGCCCATAGAGATAGATGCCTATCCAGAGATGATTC
ACGATGCATACTCCCCCCGCGAAGTGTTTTCGCACGCTGACATGCGCAAT
GTCGTGGCCTACGCGCGAGCGCGTGGCGTGCGGGTCATCCCAGAGATCGA
TATGCCCAGTCATTCTGCTTCCGGGTGGAAGCAGGTCGACCCCCAGATGG
TGACCTGCGTGGACTCCTGGTGGTCCAATGACGATTATTCCCTGCATACC
GCGATGCTACTTCCTCGTCTCTGGCTGGCGTGCCTCACGCTGCTCGTGGC
TGGGGCCGCTGCCGTCAAGGTCAATCCCTTACCAGCTCCACGCAACATCA
CCTGGGCTTCGTCGGGCCCTAAGCAGCTGGCCGGCTTCGTCAGTCTCCGT
GCTTCCCAGGACACGTCTGATTTTATTCTGGCCAGTCTACAACGAGCTGT
CCAACATCTTCCCAGACAACTGGTTCCATGTGGGGGCGGATGAGATCCAG
CCTAACTGTTTTAACTTCAGTAGCTATGTTACCGACTGGTTTACGCAGGA
TCCGTCGCGCACCTATAATGACCTGGCCCAATACTGGGTCGACCATGCCG
TGCCAATTTTCCAGAACTACAGTGCCTCGCGGCGATTGGTCATGTGGGAA
GATATTGTACTGTCAACAGAGCATGCGCATGATGTCCCTACGAACATCGT
CATGCAGACCTGGAACAACGGGCTGGACTACATCAACCAGCTGACCGCCA
AGGGCTACGACGTGATTGTATCATCGGCGGATTTTATGTATTTGGACTGC
GGGATGGGGGGCTTCCTAACGAATGATCCTCGCTACGATGTAATGAGTAA
TCCTGATGCAAGCACACCAAACTTCAACTACGGCGGCAACGGGGGCTCGT
GGTGTGCGCCGTACAAGACATGGCAGCGCATCTACGACTACGACTTCACG
CAGAACCTCACTGTTACCCAGGCCCAGCACATTGTAGGAGCAGAGGCGCC
GCTCTGGTCAGAGCAAGTGGATGATGTTACGGTATCCAGTCAATTTTGGC
CGCGTGCCGCTGCGCTGGCAGAGCTGGTGTGGTCTGGGAATCGTGATGAG
AACGGGCGGAAACGCACGACGCTGATGACCCAGCGCATCCTGAACTTCCG
CGAGTATCTGGTGGCCAACGGGGCTCAAGCGCAAGCGTTGGTTCCTAAGT
ACTGTGTGCAGCATCCGCATACCTGCGACTTGTATCTAAACCAGAGTGCG
ATTCAGTAACGACCGAAGGTCCCGTGCCATCTTTTCAACCCTTCCCCACC
GGTACGGCCGGGGTCGCTAGAAGGTCCTCGCAGGCACTGCCATCGCTCCA
ATTTGTCGATGTGAATGTGTTGGATATTGGCGCAGATCTCCAGCAAGGGG
TGGACGAGTCTTACACCCTCGAAGTCACCGAAAGTGCTACCTCGGTGGTC
ATTGAGGCTCCCACCGTGTGGGGGGCGCTCCATGCCTTTACCACTCTCCA
GCAGCTGGTCATCTCCGACGGACAGGGGGGCTTGTTGATCGAGCAGCCCG
TTAAGATTCAGGATGCCCCGCTCTATCCCTACCGAGGAATTATGCTTGAT
ACTGGTCGAAACTTCATCTCGGTCAACAAGATTTACGAGCAGCTGGACGG
CATGTCCCTTTCAAAACTCAACGTTCTACACTGGCACATGGAAGACACCC
AATCGTGGCCCATAGAGATAGATGCCTATCCAGAGATGATTCACGATGCA
TACTCCCCCCGCGAAGTGTTTTCGCACGCTGACATGCGCAATGTCGTGGC
CTACGCGCGAGCGCGTGGCGTGCGGGTCATCCCAGAGATCGATATGCCCA
GTCATTCTGCTTCCGGGTGGAAGCAGGTCGACCCCCAGATGGTGACCTGC
GTGGACTCCTGGTGGTCCAATGACGATTATTCCCTGCATACCGCGATGCT
ACTTCCTCGTCTCTGGCTGGCGTGCCTCACGCTGCTCGTGGCTGGGGCCG
CTGCCGTCAAGGTCAATCCCTTACCAGCTCCACGCAACATCACCTGGGCT
TCGTCGGGCCCTAAGCAGCTGGCCGGCTTCGTCAGTCTCCGTGCTTCCCA
GGACACGTCTGATTTTATTCTGGCCA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004563beta-N-acetylhexosaminidase activity
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_000621ATCC10864_000621Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_000621-T1ATCC10864_000621-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_000621-T1.cdsATCC10864_000621-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_000621-T1.exon3ATCC10864_000621-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_000621-T1.exon2ATCC10864_000621-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_000621-T1.exon1ATCC10864_000621-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR015883
InterProIPR029019
InterProIPR029018
InterProIPR025705
InterProIPR017853
PFAMPF00728
PFAMPF14845
Properties
Property NameValue
NoteCAZy:GH20
NoteSECRETED:SignalP(1-20)
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000015supercontigMCQH01000015:194311..196119 -
Powered by Drupal