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ATCC10864_000860-T1, ATCC10864_000860-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_000860-T1
Unique NameATCC10864_000860-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000019:194898..196480+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_000860-T1 ID=ATCC10864_000860-T1|Name=ATCC10864_000860-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1583bp|location=Sequence derived from alignment at MCQH01000019:194898..196480+ (Aspergillus niger ATCC 10864)
ATGTCCTACGAAGAGCGCGCCAACGCGCACCCCAACCTGGGCGACGAGTC
CGATGTGGAGGAGGAAGCGCTTGTCAACGACTACCGCGAGCAGGTCAACT
TCGATGATGGCATGAGCGAGTTGGACAGAACGACATCCCTTGGAGGTGGT
TCCCAGACGCAGGACCTCCAGGCACAGCTCGCTGCTGCTGCCACCCCGCT
CGAGTACCAGGCTACCCTCGAGACCAAGTTCGCAAGCTACGACAACTACT
GCAGCCTTTTCCACTACATCCTGAACTCTGATGGTCCGGTTGAGCTCGAG
GTTCCTTCTGTATGTACTACTCCGTCTGTCAGGAGCGGCGGGCAGCGGCT
ACGGCTGCAGCTATATTTGATACACGCTTCGCTGCCTTGATCTGCAATTG
TGTGCGGTTGATTCGCCGCGGTTGATACACTGTGCTAACTAGCCCATTTT
ATTGTCAATAGTACTACTGGGCCTGGGATGTCATCGACGAGTTCATCTAC
CAGTTCGAATCTTTCTGCCGCTACCGCAACCGTGTCGCTCGCAGCGGCTC
CAACGAGGAGGAGGCCCAGCTTCTCCGTGAGAACCCGAACACGTGGGGTT
GCTACTCCGTGCTGAACGTCCTCTACTCCCTCATCCAAAGGTCGCAGATC
AACGAGCAGTTGGCTGCCATCAAGCGTGGTGAGGACCCCTTGGCGTTTGC
CGGAGAGTATGGCTCCCGCCCTCTGTACAAGATGCTGGGATACTTCTCCA
TCATTGGACTCCTGCGTGTCCACTGTCTGCTGGGTGACTTCAGCCTTGCC
CTCAAGACTCTCGACGACATCGAGATGAACAAGAAGGCCATGTTCGCCCG
TGTTATGGCGGCCCACTTCACCACCTACTACTATGTCGGTTTCTCCTACA
TGATGATGCGTCGCTATGCCGATGCCATCCGCATGTTCAGCCACATCCTG
GTCTACGTTTCCCGGACCAAGAACTTCCAGAAGGGTGGCAACAGCTACGA
TGCCATCGCCAAGAAGAACGACCAGATGTACGCTCTTATCGCCATCTGTG
TCGCTCTCCACCCCACTCGCCTGGATGACACCATCCACTCCGCCCTGCGT
GAGAAGTACGGCGAGCAGCTCAACCGCCTGCAGCATGGTGGCCCCGAGGC
CCTTCCTCTGTTCGAGGAGCTCTTCCGTTCGGCCTGCCCCAAGTTCATCA
GCCCCACTCCTCCCGACTTCGAGAACCCGGCCCTCAACGTCGACCCTGTT
GACCACCACACCGCCATCTTCATGGATGAGGTTAAGAACACCCTGTACAA
CCCTACCATCCGCTCCTACCTGAAGCTCTACACCACCATGGACCTGAAGA
AGCTGGCTGGCTTCTTGGAGGTCGAGCCTGAGAAGCTCCGCTCTTGGCTC
CTCATCAACAAGCAGCGCAGCCGTCAGGTGCGCTGGGTTGAGGGTGGTCT
TCTGGAGGGCGAGCCGGTCAACGCCAACGACCTCGACTACGCTCTGGAGA
ACGACCTTATCCACGTCAGCGAGACCAAGGCCGGACGTCGTCTGGTGGAC
TGGTACCTCAGGAACCTTGCTCGTGTCTACTAA
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Coding sequence (CDS) from alignment at MCQH01000019:194898..196480+

>ATCC10864_000860-T1 ID=ATCC10864_000860-T1|Name=ATCC10864_000860-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2862bp|location=Sequence derived from alignment at MCQH01000019:194898..196480+ (Aspergillus niger ATCC 10864)
ATGTCCTACGAAGAGCGCGCCAACGCGCACCCCAACCTGGGCGACGAGTC
CGATGTGGAGGAGGAAGCGCTTGTCAACGACTACCGCGAGCAGGTCAACT
TCGATGATGGCATGAGCGAGTTGGACAGAACGACATCCCTTGGAGGTGGT
TCCCAGACGCAGGACCTCCAGGCACAGCTCGCTGCTGCTGCCACCCCGCT
CGAGTACCAGGCTACCCTCGAGACCAAGTTCGCAAGCTACGACAACTACT
GCAGCCTTTTCCACTACATCCTGAACTCTGATGGTCCGGTTGAGCTCGAG
GTTCCTTCTTACTACTGGGCCTGGGATGTCATCGACGAGTTCATCTACCA
GTTCGAATCTTTCTGCCGCTACCGCAACCGTGTCGCTCGCAGCGGCTCCA
ACGAGGAGGAGGCCCAGCTTCTCCGTGAGAACCCGAACACGTGGGGTTGC
TACTCCGTGCTGAACGTCCTCTACTCCCTCATCCAAAGGTCGCAGATCAA
CGAGCAGTTGGCTGCCATCAAGCGTGGTGAGGACCCCTTGGCGTTTGCCG
GAGAGTATGGCTCCCGCCCTCTGTACAAGATGCTGGGATACTTCTCCATC
ATTGGACTCCTGCGTGTCCACTGTCTGCTGGGTGACTTCAGCCTTGCCCT
CAAGACTCTCGACGACATCGAGATGAACAAGAAGGCCATGTTCGCCCGTG
TTATGGCGGCCCACTTCACCACCTACTACTATGTCGGTTTCTCCTACATG
ATGATGCGTCGCTATGCCGATGCCATCCGCATGTTCAGCCACATCCTGGT
CTACGTTTCCCGGACCAAGAACTTCCAGAAGGGTGGCAACAGCTACGATG
CCATCGCCAAGAAGAACGACCAGATGTACGCTCTTATCGCCATCTGTGTC
GCTCTCCACCCCACTCGCCTGGATGACACCATCCACTCCGCCCTGCGTGA
GAAGTACGGCGAGCAGCTCAACCGCCTGCAGCATGGTGGCCCCGAGGCCC
TTCCTCTGTTCGAGGAGCTCTTCCGTTCGGCCTGCCCCAAGTTCATCAGC
CCCACTCCTCCCGACTTCGAGAACCCGGCCCTCAACGTCGACCCTGTTGA
CCACCACACCGCCATCTTCATGGATGAGGTTAAGAACACCCTGTACAACC
CTACCATCCGCTCCTACCTGAAGCTCTACACCACCATGGACCTGAAGAAG
CTGGCTGGCTTCTTGGAGGTCGAGCCTGAGAAGCTCCGCTCTTGGCTCCT
CATCAACAAGCAGCGCAGCCGTCAGGTGCGCTGGGTTGAGGGTGGTCTTC
TGGAGGGCGAGCCGGTCAACGCCAACGACCTCGACTACGCTCTGGAGAAC
GACCTTATCCACGTCAGCGAGACCAAGGCCGGACGTCGTCTGGTGGACTG
GTACCTCAGGAACCTTGCTCGTGTCTACTAAATGTCCTACGAAGAGCGCG
CCAACGCGCACCCCAACCTGGGCGACGAGTCCGATGTGGAGGAGGAAGCG
CTTGTCAACGACTACCGCGAGCAGGTCAACTTCGATGATGGCATGAGCGA
GTTGGACAGAACGACATCCCTTGGAGGTGGTTCCCAGACGCAGGACCTCC
AGGCACAGCTCGCTGCTGCTGCCACCCCGCTCGAGTACCAGGCTACCCTC
GAGACCAAGTTCGCAAGCTACGACAACTACTGCAGCCTTTTCCACTACAT
CCTGAACTCTGATGGTCCGGTTGAGCTCGAGGTTCCTTCTTACTACTGGG
CCTGGGATGTCATCGACGAGTTCATCTACCAGTTCGAATCTTTCTGCCGC
TACCGCAACCGTGTCGCTCGCAGCGGCTCCAACGAGGAGGAGGCCCAGCT
TCTCCGTGAGAACCCGAACACGTGGGGTTGCTACTCCGTGCTGAACGTCC
TCTACTCCCTCATCCAAAGGTCGCAGATCAACGAGCAGTTGGCTGCCATC
AAGCGTGGTGAGGACCCCTTGGCGTTTGCCGGAGAGTATGGCTCCCGCCC
TCTGTACAAGATGCTGGGATACTTCTCCATCATTGGACTCCTGCGTGTCC
ACTGTCTGCTGGGTGACTTCAGCCTTGCCCTCAAGACTCTCGACGACATC
GAGATGAACAAGAAGGCCATGTTCGCCCGTGTTATGGCGGCCCACTTCAC
CACCTACTACTATGTCGGTTTCTCCTACATGATGATGCGTCGCTATGCCG
ATGCCATCCGCATGTTCAGCCACATCCTGGTCTACGTTTCCCGGACCAAG
AACTTCCAGAAGGGTGGCAACAGCTACGATGCCATCGCCAAGAAGAACGA
CCAGATGTACGCTCTTATCGCCATCTGTGTCGCTCTCCACCCCACTCGCC
TGGATGACACCATCCACTCCGCCCTGCGTGAGAAGTACGGCGAGCAGCTC
AACCGCCTGCAGCATGGTGGCCCCGAGGCCCTTCCTCTGTTCGAGGAGCT
CTTCCGTTCGGCCTGCCCCAAGTTCATCAGCCCCACTCCTCCCGACTTCG
AGAACCCGGCCCTCAACGTCGACCCTGTTGACCACCACACCGCCATCTTC
ATGGATGAGGTTAAGAACACCCTGTACAACCCTACCATCCGCTCCTACCT
GAAGCTCTACACCACCATGGACCTGAAGAAGCTGGCTGGCTTCTTGGAGG
TCGAGCCTGAGAAGCTCCGCTCTTGGCTCCTCATCAACAAGCAGCGCAGC
CGTCAGGTGCGCTGGGTTGAGGGTGGTCTTCTGGAGGGCGAGCCGGTCAA
CGCCAACGACCTCGACTACGCTCTGGAGAACGACCTTATCCACGTCAGCG
AGACCAAGGCCGGACGTCGTCTGGTGGACTGGTACCTCAGGAACCTTGCT
CGTGTCTACTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003743translation initiation factor activity
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
GO:0005852eukaryotic translation initiation factor 3 complex
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_000860ATCC10864_000860Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_000860-T1.exon1ATCC10864_000860-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_000860-T1.exon2ATCC10864_000860-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_000860-T1.cdsATCC10864_000860-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_000860-T1ATCC10864_000860-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF10255
InterProIPR019382
InterProIPR000717
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000019supercontigMCQH01000019:194898..196480 +
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