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ATCC10864_000868-T1, ATCC10864_000868-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_000868-T1
Unique NameATCC10864_000868-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000019:213160..213799-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_000868-T1 ID=ATCC10864_000868-T1|Name=ATCC10864_000868-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=640bp|location=Sequence derived from alignment at MCQH01000019:213160..213799- (Aspergillus niger ATCC 10864)
ATGGGTCGCGTCCGTACCAAGGTGAGCATACACGACCGCAATAATGAAGG
AAAGAAAGAATATCAATTCTAACGAAAATGCGCGCGACAATAGACAGTCA
AGCGTTCCGCTAAGGTCGTTATCGAGCGTTACTACCCCAAGTTGACGCTC
GACTTCGAGACCAACAAGCGTATCTGCGATGAGATCGCTATCATTGCCTC
CAAGCGTCTCCGCAACAAGGTTAGTGATTACCATCTTTTTTCTCCCGGAA
ATTCCGGATATAATGGTCAAATGGCAATATACTAATAAGGAATTGGATTT
AGATCGCTGGTTACACCACCCACCTTATGAAGCGTATCCAGCGTGGCCCT
GTCCGCGGTATCTCCTTCAAGCTCCAGGAGGAGGAGCGTGAGCGCAAGGA
TCAGTACGTTCCTGAGGTCTCCGCTCTGGATGTTTCCCAGACCGAGTCCG
GCCAGCTCGACGTCGACTCTGAGACCAAGGACCTGCTCAAGAGCATGGGC
GTAAGTTCTCCCTTATGGAATCTACATTCATGATTTATATCATGTCTAAC
TCGATCGTGCTTTAGTTCGACAACCTCAAGGTCAACGTCATCCCCGTCTC
CCAGCAGCAGGCTCAGGAGCGCCCCCGCCGCTACCGGTAG
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Coding sequence (CDS) from alignment at MCQH01000019:213160..213799-

>ATCC10864_000868-T1 ID=ATCC10864_000868-T1|Name=ATCC10864_000868-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1680bp|location=Sequence derived from alignment at MCQH01000019:213160..213799- (Aspergillus niger ATCC 10864)
TTCGACAACCTCAAGGTCAACGTCATCCCCGTCTCCCAGCAGCAGGCTCA
GGAGCGCCCCCGCCGCTACCGGTAGATCGCTGGTTACACCACCCACCTTA
TGAAGCGTATCCAGCGTGGCCCTGTCCGCGGTATCTCCTTCAAGCTCCAG
GAGGAGGAGCGTGAGCGCAAGGATCAGTACGTTCCTGAGGTCTCCGCTCT
GGATGTTTCCCAGACCGAGTCCGGCCAGCTCGACGTCGACTCTGAGACCA
AGGACCTGCTCAAGAGCATGGGCACAGTCAAGCGTTCCGCTAAGGTCGTT
ATCGAGCGTTACTACCCCAAGTTGACGCTCGACTTCGAGACCAACAAGCG
TATCTGCGATGAGATCGCTATCATTGCCTCCAAGCGTCTCCGCAACAAGA
TGGGTCGCGTCCGTACCAAGTTCGACAACCTCAAGGTCAACGTCATCCCC
GTCTCCCAGCAGCAGGCTCAGGAGCGCCCCCGCCGCTACCGGTAGATCGC
TGGTTACACCACCCACCTTATGAAGCGTATCCAGCGTGGCCCTGTCCGCG
GTATCTCCTTCAAGCTCCAGGAGGAGGAGCGTGAGCGCAAGGATCAGTAC
GTTCCTGAGGTCTCCGCTCTGGATGTTTCCCAGACCGAGTCCGGCCAGCT
CGACGTCGACTCTGAGACCAAGGACCTGCTCAAGAGCATGGGCACAGTCA
AGCGTTCCGCTAAGGTCGTTATCGAGCGTTACTACCCCAAGTTGACGCTC
GACTTCGAGACCAACAAGCGTATCTGCGATGAGATCGCTATCATTGCCTC
CAAGCGTCTCCGCAACAAGATGGGTCGCGTCCGTACCAAGTTCGACAACC
TCAAGGTCAACGTCATCCCCGTCTCCCAGCAGCAGGCTCAGGAGCGCCCC
CGCCGCTACCGGTAGATCGCTGGTTACACCACCCACCTTATGAAGCGTAT
CCAGCGTGGCCCTGTCCGCGGTATCTCCTTCAAGCTCCAGGAGGAGGAGC
GTGAGCGCAAGGATCAGTACGTTCCTGAGGTCTCCGCTCTGGATGTTTCC
CAGACCGAGTCCGGCCAGCTCGACGTCGACTCTGAGACCAAGGACCTGCT
CAAGAGCATGGGCACAGTCAAGCGTTCCGCTAAGGTCGTTATCGAGCGTT
ACTACCCCAAGTTGACGCTCGACTTCGAGACCAACAAGCGTATCTGCGAT
GAGATCGCTATCATTGCCTCCAAGCGTCTCCGCAACAAGATGGGTCGCGT
CCGTACCAAGTTCGACAACCTCAAGGTCAACGTCATCCCCGTCTCCCAGC
AGCAGGCTCAGGAGCGCCCCCGCCGCTACCGGTAGATCGCTGGTTACACC
ACCCACCTTATGAAGCGTATCCAGCGTGGCCCTGTCCGCGGTATCTCCTT
CAAGCTCCAGGAGGAGGAGCGTGAGCGCAAGGATCAGTACGTTCCTGAGG
TCTCCGCTCTGGATGTTTCCCAGACCGAGTCCGGCCAGCTCGACGTCGAC
TCTGAGACCAAGGACCTGCTCAAGAGCATGGGCACAGTCAAGCGTTCCGC
TAAGGTCGTTATCGAGCGTTACTACCCCAAGTTGACGCTCGACTTCGAGA
CCAACAAGCGTATCTGCGATGAGATCGCTATCATTGCCTCCAAGCGTCTC
CGCAACAAGATGGGTCGCGTCCGTACCAAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPS17ATCC10864_000868Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_000868-T1ATCC10864_000868-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_000868-T1.cdsATCC10864_000868-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_000868-T1.exon4ATCC10864_000868-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_000868-T1.exon3ATCC10864_000868-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_000868-T1.exon2ATCC10864_000868-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_000868-T1.exon1ATCC10864_000868-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF00833
InterProIPR001210
InterProIPR018273
InterProIPR036401
Properties
Property NameValue
Product40S ribosomal protein S17
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000019supercontigMCQH01000019:213160..213799 -
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