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ATCC10864_000952-T1, ATCC10864_000952-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_000952-T1
Unique NameATCC10864_000952-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000019:461900..463086-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_000952-T1 ID=ATCC10864_000952-T1|Name=ATCC10864_000952-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1187bp|location=Sequence derived from alignment at MCQH01000019:461900..463086- (Aspergillus niger ATCC 10864)
ATGGCTTCCACTATCGAACTCGCATCCTCCTTCATCGAGGGTGCCCCGCC
CGGTGAGGTAGGCAGCTACCCCCTCATGCTCCTCCTATACCTGCATGACC
CCGAACATAGCTAACAGCATCTCTTAGCTCGCAGATGTCGTCGCAGGTAT
GCAATCCAATTCCACCTATCTATCCCGATTGTTGCCACCCGCATCATACC
CCTCACCCAGTCCATACTAAGCAGCTCTGCAGACGTCAAGGCTCTCACCT
CCGACGGTCCCGACATTATCCCCTCCCTCGCACCCGCCTTTGAGCGCTAC
AATGAGACGCAACTGGCGACCGTGAAGCTTCCCGGCGCAAGCCAGGAGGT
AGGCCGCTATCTTTCTGATAATGGAGTCGACCGACCGTCCTGACCTCCTC
TAGGTTCTGATCAGCGAATACAACAAGCTTGAGGGAAACCGGTACTTCGA
TGTGGAAAGTCAGACGTCGTTCGAGGTGGATCATGTCACGCAGGTGGGTG
GATATAAGACATTGGGAGGACAAGGGGTTGACTGGGAATAGGAAGCGTCG
GCAGCACAGTCGTACGTTCTGGAGTCGCAGAATGCAGATTTGATGTACGC
TCCTTTCCCTCGTATTTGATTCAATGTTGGGCCGTGATGCTAACAGGTCG
CAGCAAATCTCTCCTTAAGTCCCTCTCCGCACACGCCACCGAACACTACC
GCACCTGCAGTTACGGCGTGTACCCCATCGAGGATGACACTGCCGTGGCC
ATTGTCCTCGTTGCTAACCGCTACTCGCCTAATAACTTCTGGTATACCTC
CCACATTGTACGCTCAACGAGTAGTTACTGATTTAGGACAGGAACGGTCG
CTTCCGCGCCATCTACACCCTCCCCGTGAACTCCTCTTCGACCACCATCT
CCGGCCAGATCAAGGTCGATGTGCACTACTATGAAGACGGCAACGTGGCC
CTCAACACTACCAAGCCGGTGAACCTGTCAGTGCAATCCGTGGATGCTAG
TGCCATCATTTCGCGGATCGCCGCGGCGGAACGGGATTACCAAGAGGAGC
TGAACCGGGCGTTTGTTAGCACGGCAGAGGGAGTATTCAAGGGGCTGCGG
AGACAGTTGCCGATCACACGGCAGAAGGTTGAGTGGGAGAAGGTCGGAGG
ATACCGGCTGGGACAGGATATTGCGGGTGGTCGGTGA
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Coding sequence (CDS) from alignment at MCQH01000019:461900..463086-

>ATCC10864_000952-T1 ID=ATCC10864_000952-T1|Name=ATCC10864_000952-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=5733bp|location=Sequence derived from alignment at MCQH01000019:461900..463086- (Aspergillus niger ATCC 10864)
GAACGGTCGCTTCCGCGCCATCTACACCCTCCCCGTGAACTCCTCTTCGA
CCACCATCTCCGGCCAGATCAAGGTCGATGTGCACTACTATGAAGACGGC
AACGTGGCCCTCAACACTACCAAGCCGGTGAACCTGTCAGTGCAATCCGT
GGATGCTAGTGCCATCATTTCGCGGATCGCCGCGGCGGAACGGGATTACC
AAGAGGAGCTGAACCGGGCGTTTGTTAGCACGGCAGAGGGAGTATTCAAG
GGGCTGCGGAGACAGTTGCCGATCACACGGCAGAAGGTTGAGTGGGAGAA
GGTCGGAGGATACCGGCTGGGACAGGATATTGCGGGTGGTCGGTGACAAA
TCTCTCCTTAAGTCCCTCTCCGCACACGCCACCGAACACTACCGCACCTG
CAGTTACGGCGTGTACCCCATCGAGGATGACACTGCCGTGGCCATTGTCC
TCGTTGCTAACCGCTACTCGCCTAATAACTTCTGGAAGCGTCGGCAGCAC
AGTCGTACGTTCTGGAGTCGCAGAATGCAGATTTGATGTTCTGATCAGCG
AATACAACAAGCTTGAGGGAAACCGGTACTTCGATGTGGAAAGTCAGACG
TCGTTCGAGGTGGATCATGTCACGCAGACGTCAAGGCTCTCACCTCCGAC
GGTCCCGACATTATCCCCTCCCTCGCACCCGCCTTTGAGCGCTACAATGA
GACGCAACTGGCGACCGTGAAGCTTCCCGGCGCAAGCCAGGAGCTCGCAG
ATGTCGTCGCAGATGGCTTCCACTATCGAACTCGCATCCTCCTTCATCGA
GGGTGCCCCGCCCGGTGAGGAACGGTCGCTTCCGCGCCATCTACACCCTC
CCCGTGAACTCCTCTTCGACCACCATCTCCGGCCAGATCAAGGTCGATGT
GCACTACTATGAAGACGGCAACGTGGCCCTCAACACTACCAAGCCGGTGA
ACCTGTCAGTGCAATCCGTGGATGCTAGTGCCATCATTTCGCGGATCGCC
GCGGCGGAACGGGATTACCAAGAGGAGCTGAACCGGGCGTTTGTTAGCAC
GGCAGAGGGAGTATTCAAGGGGCTGCGGAGACAGTTGCCGATCACACGGC
AGAAGGTTGAGTGGGAGAAGGTCGGAGGATACCGGCTGGGACAGGATATT
GCGGGTGGTCGGTGACAAATCTCTCCTTAAGTCCCTCTCCGCACACGCCA
CCGAACACTACCGCACCTGCAGTTACGGCGTGTACCCCATCGAGGATGAC
ACTGCCGTGGCCATTGTCCTCGTTGCTAACCGCTACTCGCCTAATAACTT
CTGGAAGCGTCGGCAGCACAGTCGTACGTTCTGGAGTCGCAGAATGCAGA
TTTGATGTTCTGATCAGCGAATACAACAAGCTTGAGGGAAACCGGTACTT
CGATGTGGAAAGTCAGACGTCGTTCGAGGTGGATCATGTCACGCAGACGT
CAAGGCTCTCACCTCCGACGGTCCCGACATTATCCCCTCCCTCGCACCCG
CCTTTGAGCGCTACAATGAGACGCAACTGGCGACCGTGAAGCTTCCCGGC
GCAAGCCAGGAGCTCGCAGATGTCGTCGCAGATGGCTTCCACTATCGAAC
TCGCATCCTCCTTCATCGAGGGTGCCCCGCCCGGTGAGGAACGGTCGCTT
CCGCGCCATCTACACCCTCCCCGTGAACTCCTCTTCGACCACCATCTCCG
GCCAGATCAAGGTCGATGTGCACTACTATGAAGACGGCAACGTGGCCCTC
AACACTACCAAGCCGGTGAACCTGTCAGTGCAATCCGTGGATGCTAGTGC
CATCATTTCGCGGATCGCCGCGGCGGAACGGGATTACCAAGAGGAGCTGA
ACCGGGCGTTTGTTAGCACGGCAGAGGGAGTATTCAAGGGGCTGCGGAGA
CAGTTGCCGATCACACGGCAGAAGGTTGAGTGGGAGAAGGTCGGAGGATA
CCGGCTGGGACAGGATATTGCGGGTGGTCGGTGACAAATCTCTCCTTAAG
TCCCTCTCCGCACACGCCACCGAACACTACCGCACCTGCAGTTACGGCGT
GTACCCCATCGAGGATGACACTGCCGTGGCCATTGTCCTCGTTGCTAACC
GCTACTCGCCTAATAACTTCTGGAAGCGTCGGCAGCACAGTCGTACGTTC
TGGAGTCGCAGAATGCAGATTTGATGTTCTGATCAGCGAATACAACAAGC
TTGAGGGAAACCGGTACTTCGATGTGGAAAGTCAGACGTCGTTCGAGGTG
GATCATGTCACGCAGACGTCAAGGCTCTCACCTCCGACGGTCCCGACATT
ATCCCCTCCCTCGCACCCGCCTTTGAGCGCTACAATGAGACGCAACTGGC
GACCGTGAAGCTTCCCGGCGCAAGCCAGGAGCTCGCAGATGTCGTCGCAG
ATGGCTTCCACTATCGAACTCGCATCCTCCTTCATCGAGGGTGCCCCGCC
CGGTGAGGAACGGTCGCTTCCGCGCCATCTACACCCTCCCCGTGAACTCC
TCTTCGACCACCATCTCCGGCCAGATCAAGGTCGATGTGCACTACTATGA
AGACGGCAACGTGGCCCTCAACACTACCAAGCCGGTGAACCTGTCAGTGC
AATCCGTGGATGCTAGTGCCATCATTTCGCGGATCGCCGCGGCGGAACGG
GATTACCAAGAGGAGCTGAACCGGGCGTTTGTTAGCACGGCAGAGGGAGT
ATTCAAGGGGCTGCGGAGACAGTTGCCGATCACACGGCAGAAGGTTGAGT
GGGAGAAGGTCGGAGGATACCGGCTGGGACAGGATATTGCGGGTGGTCGG
TGACAAATCTCTCCTTAAGTCCCTCTCCGCACACGCCACCGAACACTACC
GCACCTGCAGTTACGGCGTGTACCCCATCGAGGATGACACTGCCGTGGCC
ATTGTCCTCGTTGCTAACCGCTACTCGCCTAATAACTTCTGGAAGCGTCG
GCAGCACAGTCGTACGTTCTGGAGTCGCAGAATGCAGATTTGATGTTCTG
ATCAGCGAATACAACAAGCTTGAGGGAAACCGGTACTTCGATGTGGAAAG
TCAGACGTCGTTCGAGGTGGATCATGTCACGCAGACGTCAAGGCTCTCAC
CTCCGACGGTCCCGACATTATCCCCTCCCTCGCACCCGCCTTTGAGCGCT
ACAATGAGACGCAACTGGCGACCGTGAAGCTTCCCGGCGCAAGCCAGGAG
CTCGCAGATGTCGTCGCAGATGGCTTCCACTATCGAACTCGCATCCTCCT
TCATCGAGGGTGCCCCGCCCGGTGAGGAACGGTCGCTTCCGCGCCATCTA
CACCCTCCCCGTGAACTCCTCTTCGACCACCATCTCCGGCCAGATCAAGG
TCGATGTGCACTACTATGAAGACGGCAACGTGGCCCTCAACACTACCAAG
CCGGTGAACCTGTCAGTGCAATCCGTGGATGCTAGTGCCATCATTTCGCG
GATCGCCGCGGCGGAACGGGATTACCAAGAGGAGCTGAACCGGGCGTTTG
TTAGCACGGCAGAGGGAGTATTCAAGGGGCTGCGGAGACAGTTGCCGATC
ACACGGCAGAAGGTTGAGTGGGAGAAGGTCGGAGGATACCGGCTGGGACA
GGATATTGCGGGTGGTCGGTGACAAATCTCTCCTTAAGTCCCTCTCCGCA
CACGCCACCGAACACTACCGCACCTGCAGTTACGGCGTGTACCCCATCGA
GGATGACACTGCCGTGGCCATTGTCCTCGTTGCTAACCGCTACTCGCCTA
ATAACTTCTGGAAGCGTCGGCAGCACAGTCGTACGTTCTGGAGTCGCAGA
ATGCAGATTTGATGTTCTGATCAGCGAATACAACAAGCTTGAGGGAAACC
GGTACTTCGATGTGGAAAGTCAGACGTCGTTCGAGGTGGATCATGTCACG
CAGACGTCAAGGCTCTCACCTCCGACGGTCCCGACATTATCCCCTCCCTC
GCACCCGCCTTTGAGCGCTACAATGAGACGCAACTGGCGACCGTGAAGCT
TCCCGGCGCAAGCCAGGAGCTCGCAGATGTCGTCGCAGATGGCTTCCACT
ATCGAACTCGCATCCTCCTTCATCGAGGGTGCCCCGCCCGGTGAGGAACG
GTCGCTTCCGCGCCATCTACACCCTCCCCGTGAACTCCTCTTCGACCACC
ATCTCCGGCCAGATCAAGGTCGATGTGCACTACTATGAAGACGGCAACGT
GGCCCTCAACACTACCAAGCCGGTGAACCTGTCAGTGCAATCCGTGGATG
CTAGTGCCATCATTTCGCGGATCGCCGCGGCGGAACGGGATTACCAAGAG
GAGCTGAACCGGGCGTTTGTTAGCACGGCAGAGGGAGTATTCAAGGGGCT
GCGGAGACAGTTGCCGATCACACGGCAGAAGGTTGAGTGGGAGAAGGTCG
GAGGATACCGGCTGGGACAGGATATTGCGGGTGGTCGGTGACAAATCTCT
CCTTAAGTCCCTCTCCGCACACGCCACCGAACACTACCGCACCTGCAGTT
ACGGCGTGTACCCCATCGAGGATGACACTGCCGTGGCCATTGTCCTCGTT
GCTAACCGCTACTCGCCTAATAACTTCTGGAAGCGTCGGCAGCACAGTCG
TACGTTCTGGAGTCGCAGAATGCAGATTTGATGTTCTGATCAGCGAATAC
AACAAGCTTGAGGGAAACCGGTACTTCGATGTGGAAAGTCAGACGTCGTT
CGAGGTGGATCATGTCACGCAGACGTCAAGGCTCTCACCTCCGACGGTCC
CGACATTATCCCCTCCCTCGCACCCGCCTTTGAGCGCTACAATGAGACGC
AACTGGCGACCGTGAAGCTTCCCGGCGCAAGCCAGGAGCTCGCAGATGTC
GTCGCAGATGGCTTCCACTATCGAACTCGCATCCTCCTTCATCGAGGGTG
CCCCGCCCGGTGAGGAACGGTCGCTTCCGCGCCATCTACACCCTCCCCGT
GAACTCCTCTTCGACCACCATCTCCGGCCAGATCAAGGTCGATGTGCACT
ACTATGAAGACGGCAACGTGGCCCTCAACACTACCAAGCCGGTGAACCTG
TCAGTGCAATCCGTGGATGCTAGTGCCATCATTTCGCGGATCGCCGCGGC
GGAACGGGATTACCAAGAGGAGCTGAACCGGGCGTTTGTTAGCACGGCAG
AGGGAGTATTCAAGGGGCTGCGGAGACAGTTGCCGATCACACGGCAGAAG
GTTGAGTGGGAGAAGGTCGGAGGATACCGGCTGGGACAGGATATTGCGGG
TGGTCGGTGACAAATCTCTCCTTAAGTCCCTCTCCGCACACGCCACCGAA
CACTACCGCACCTGCAGTTACGGCGTGTACCCCATCGAGGATGACACTGC
CGTGGCCATTGTCCTCGTTGCTAACCGCTACTCGCCTAATAACTTCTGGA
AGCGTCGGCAGCACAGTCGTACGTTCTGGAGTCGCAGAATGCAGATTTGA
TGTTCTGATCAGCGAATACAACAAGCTTGAGGGAAACCGGTACTTCGATG
TGGAAAGTCAGACGTCGTTCGAGGTGGATCATGTCACGCAGACGTCAAGG
CTCTCACCTCCGACGGTCCCGACATTATCCCCTCCCTCGCACCCGCCTTT
GAGCGCTACAATGAGACGCAACTGGCGACCGTGAAGCTTCCCGGCGCAAG
CCAGGAGCTCGCAGATGTCGTCGCAGATGGCTTCCACTATCGAACTCGCA
TCCTCCTTCATCGAGGGTGCCCCGCCCGGTGAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0051016barbed-end actin filament capping
Vocabulary: Cellular Component
TermDefinition
GO:0008290F-actin capping protein complex
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAP1ATCC10864_000952Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_000952-T1ATCC10864_000952-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_000952-T1.cdsATCC10864_000952-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_000952-T1.exon7ATCC10864_000952-T1.exon7Aspergillus niger ATCC 10864exon
ATCC10864_000952-T1.exon6ATCC10864_000952-T1.exon6Aspergillus niger ATCC 10864exon
ATCC10864_000952-T1.exon5ATCC10864_000952-T1.exon5Aspergillus niger ATCC 10864exon
ATCC10864_000952-T1.exon4ATCC10864_000952-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_000952-T1.exon3ATCC10864_000952-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_000952-T1.exon2ATCC10864_000952-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_000952-T1.exon1ATCC10864_000952-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR017865
InterProIPR042276
InterProIPR037282
InterProIPR042489
PFAMPF01267
InterProIPR002189
Properties
Property NameValue
NoteantiSMASH:Cluster_1000019.3
NoteBUSCO:EOG09264C3N
ProductF-actin-capping protein subunit alpha
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000019supercontigMCQH01000019:461900..463086 -
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