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ATCC10864_001015-T1, ATCC10864_001015-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_001015-T1
Unique NameATCC10864_001015-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000019:645869..646854+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_001015-T1 ID=ATCC10864_001015-T1|Name=ATCC10864_001015-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=986bp|location=Sequence derived from alignment at MCQH01000019:645869..646854+ (Aspergillus niger ATCC 10864)
ATGACAGGCTTCGATTTCTCCAACTACAACCGTAACGCGGCTCTCCACGC
GAAGGGAGTCCCTCTTCCCAAAGCCACCAGCACCGGTACCACCATCGTGG
GATGTATATACGACAATGGCGTTGTGGTAGGTACCTCCGGAGCAACCCAA
CAAGCTCCCTAGTACCCAAGACGACGATCACGAACTCACCACATCTGGCA
TAACCACAGATTGCAGCAGATACCAGAGCCACCAGCGGCCCGATAGTAGC
AGACAAGGTAAGCACCGCTTTTCCCAGGACATTCACACCTATCTCCAATA
ACCCAACTCAACAACTAACACACTACCCCCCACACCTCCAGAACTGCGAG
AAACTACACTACATCGCGCCCAAGATCTGGTGCGCCGGAGCCGGAACGGC
CGCCGACACCGAGTTCACGACGGCGTTGATCAGCTCGAACATCGAACTGC
ACGCACTTTCGACGGGCCGGCCCCCACGCGTAATCACCTGCATGACGATG
CTGAAGCAGCACCTATTCCGATACCAAGGCCACATCGGCGCCTACCTGGT
TGTGGCGGGTGTCGATCCCACCGGCATTGGTCTTTTCACCGTCCACGCCC
ACGGATCCACCGACAAGCTTCCCTACGTGACCATGGGATCAGGTTCTCTG
GCCGCGATGTCGGTGTTCGAGTCGACATGGAAGCCGAATCTGGACCGTGA
GGGCGCGATCGCCCTGTGCGCGGAGGCCATCAAGGCCGGTATCTTCAACG
ATCTGGGATCCGGTAGCAATGTCGATGTTTGCGTCATTGAGAAGGACAAG
CCTACGCAGTTGCTGCGGAACTACATCAGGCCTAATGAGCGTGGCGAGAA
GGAGCGCAATTACCGCTTCCCCAAGGGTACTACGGCTTATTTGAACCAGA
AGATCATCAGCAAGGAGGATATGCGGAAGTATATCTCTGTTGAGGAGGCG
TCTGGTGATCCTAATTTGATGGAGGTGGATGTCTAA
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Coding sequence (CDS) from alignment at MCQH01000019:645869..646854+

>ATCC10864_001015-T1 ID=ATCC10864_001015-T1|Name=ATCC10864_001015-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2457bp|location=Sequence derived from alignment at MCQH01000019:645869..646854+ (Aspergillus niger ATCC 10864)
ATGACAGGCTTCGATTTCTCCAACTACAACCGTAACGCGGCTCTCCACGC
GAAGGGAGTCCCTCTTCCCAAAGCCACCAGCACCGGTACCACCATCGTGG
GATGTATATACGACAATGGCGTTGTGATTGCAGCAGATACCAGAGCCACC
AGCGGCCCGATAGTAGCAGACAAGAACTGCGAGAAACTACACTACATCGC
GCCCAAGATCTGGTGCGCCGGAGCCGGAACGGCCGCCGACACCGAGTTCA
CGACGGCGTTGATCAGCTCGAACATCGAACTGCACGCACTTTCGACGGGC
CGGCCCCCACGCGTAATCACCTGCATGACGATGCTGAAGCAGCACCTATT
CCGATACCAAGGCCACATCGGCGCCTACCTGGTTGTGGCGGGTGTCGATC
CCACCGGCATTGGTCTTTTCACCGTCCACGCCCACGGATCCACCGACAAG
CTTCCCTACGTGACCATGGGATCAGGTTCTCTGGCCGCGATGTCGGTGTT
CGAGTCGACATGGAAGCCGAATCTGGACCGTGAGGGCGCGATCGCCCTGT
GCGCGGAGGCCATCAAGGCCGGTATCTTCAACGATCTGGGATCCGGTAGC
AATGTCGATGTTTGCGTCATTGAGAAGGACAAGCCTACGCAGTTGCTGCG
GAACTACATCAGGCCTAATGAGCGTGGCGAGAAGGAGCGCAATTACCGCT
TCCCCAAGGGTACTACGGCTTATTTGAACCAGAAGATCATCAGCAAGGAG
GATATGCGGAAGTATATCTCTGTTGAGGAGGCGTCTGGTGATCCTAATTT
GATGGAGGTGGATGTCTAAATGACAGGCTTCGATTTCTCCAACTACAACC
GTAACGCGGCTCTCCACGCGAAGGGAGTCCCTCTTCCCAAAGCCACCAGC
ACCGGTACCACCATCGTGGGATGTATATACGACAATGGCGTTGTGATTGC
AGCAGATACCAGAGCCACCAGCGGCCCGATAGTAGCAGACAAGAACTGCG
AGAAACTACACTACATCGCGCCCAAGATCTGGTGCGCCGGAGCCGGAACG
GCCGCCGACACCGAGTTCACGACGGCGTTGATCAGCTCGAACATCGAACT
GCACGCACTTTCGACGGGCCGGCCCCCACGCGTAATCACCTGCATGACGA
TGCTGAAGCAGCACCTATTCCGATACCAAGGCCACATCGGCGCCTACCTG
GTTGTGGCGGGTGTCGATCCCACCGGCATTGGTCTTTTCACCGTCCACGC
CCACGGATCCACCGACAAGCTTCCCTACGTGACCATGGGATCAGGTTCTC
TGGCCGCGATGTCGGTGTTCGAGTCGACATGGAAGCCGAATCTGGACCGT
GAGGGCGCGATCGCCCTGTGCGCGGAGGCCATCAAGGCCGGTATCTTCAA
CGATCTGGGATCCGGTAGCAATGTCGATGTTTGCGTCATTGAGAAGGACA
AGCCTACGCAGTTGCTGCGGAACTACATCAGGCCTAATGAGCGTGGCGAG
AAGGAGCGCAATTACCGCTTCCCCAAGGGTACTACGGCTTATTTGAACCA
GAAGATCATCAGCAAGGAGGATATGCGGAAGTATATCTCTGTTGAGGAGG
CGTCTGGTGATCCTAATTTGATGGAGGTGGATGTCTAAATGACAGGCTTC
GATTTCTCCAACTACAACCGTAACGCGGCTCTCCACGCGAAGGGAGTCCC
TCTTCCCAAAGCCACCAGCACCGGTACCACCATCGTGGGATGTATATACG
ACAATGGCGTTGTGATTGCAGCAGATACCAGAGCCACCAGCGGCCCGATA
GTAGCAGACAAGAACTGCGAGAAACTACACTACATCGCGCCCAAGATCTG
GTGCGCCGGAGCCGGAACGGCCGCCGACACCGAGTTCACGACGGCGTTGA
TCAGCTCGAACATCGAACTGCACGCACTTTCGACGGGCCGGCCCCCACGC
GTAATCACCTGCATGACGATGCTGAAGCAGCACCTATTCCGATACCAAGG
CCACATCGGCGCCTACCTGGTTGTGGCGGGTGTCGATCCCACCGGCATTG
GTCTTTTCACCGTCCACGCCCACGGATCCACCGACAAGCTTCCCTACGTG
ACCATGGGATCAGGTTCTCTGGCCGCGATGTCGGTGTTCGAGTCGACATG
GAAGCCGAATCTGGACCGTGAGGGCGCGATCGCCCTGTGCGCGGAGGCCA
TCAAGGCCGGTATCTTCAACGATCTGGGATCCGGTAGCAATGTCGATGTT
TGCGTCATTGAGAAGGACAAGCCTACGCAGTTGCTGCGGAACTACATCAG
GCCTAATGAGCGTGGCGAGAAGGAGCGCAATTACCGCTTCCCCAAGGGTA
CTACGGCTTATTTGAACCAGAAGATCATCAGCAAGGAGGATATGCGGAAG
TATATCTCTGTTGAGGAGGCGTCTGGTGATCCTAATTTGATGGAGGTGGA
TGTCTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0004298threonine-type endopeptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0051603proteolysis involved in cellular protein catabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005839proteasome core complex
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PUP1ATCC10864_001015Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001015-T1.exon1ATCC10864_001015-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_001015-T1.exon2ATCC10864_001015-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_001015-T1.exon3ATCC10864_001015-T1.exon3Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001015-T1.cdsATCC10864_001015-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001015-T1ATCC10864_001015-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR000243
InterProIPR035216
InterProIPR001353
InterProIPR023333
PFAMPF12465
InterProIPR024689
PFAMPF00227
InterProIPR029055
Properties
Property NameValue
NoteBUSCO:EOG092641M3
NoteMEROPS:MER0000542
Productproteasome core particle subunit beta 2
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000019supercontigMCQH01000019:645869..646854 +
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