You are here

ATCC10864_001018-T1, ATCC10864_001018-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_001018-T1
Unique NameATCC10864_001018-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000019:660540..661198-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_001018-T1 ID=ATCC10864_001018-T1|Name=ATCC10864_001018-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=659bp|location=Sequence derived from alignment at MCQH01000019:660540..661198- (Aspergillus niger ATCC 10864)
ATGGCTTCATTCAATCCAACCTTGAAAACCCCCGAGTACTGCACTGCAGA CTTCTCTCTAATTCCAGTATGTGACCACTTGTTTCTATTTAGCTAAAGGG AGACAGAAAAATGGCTCGGTCGATACCAAATTCTAACACCCGTGACCTAG ATCGGCTCTCAAAGCGCATCCTTCTCCAAGCAGGTTGCGGATATCCAGCG TCTGATGCAGAACTCCGGTCTCAAGTATCAGATGCACGCCACTGGAACTA TAGTTGGTATGCTTCCGTTCACATTCAACCCGTTTCGATGCTGGATCGGA ATTTTAGTCGTGGATATCGGCCCGAACACTGCATGAAGCAACGATGTAGG GCTTCCATGTGGAGTCTTTATTCTGAGATCATGTGCTATTTCCCGTCTTT GTTTTTGCAAAGCTGATACATCTGGTTAAAGAGGGATCGTGGGACCAGGT ATCCCAAGTCATCGGATACGCCCATACGCTGATTCACCAGGAAGGCATCG CCAGGATTCAGACGGACATTCGCATCACCACTAGGTGAGTTTGCTTTTCG TAGTTTTATCCACTTTCTTGGCCGTTATCTTAGACTAGTGTATAGGACCG ACAAGGTGCAGCCTATGGAGGCCAATATAGCCTCGGTGCAGAGGGCTCTT GCGACTTAA
back to top

Coding sequence (CDS) from alignment at MCQH01000019:660540..661198-

>ATCC10864_001018-T1 ID=ATCC10864_001018-T1|Name=ATCC10864_001018-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1356bp|location=Sequence derived from alignment at MCQH01000019:660540..661198- (Aspergillus niger ATCC 10864)
GACCGACAAGGTGCAGCCTATGGAGGCCAATATAGCCTCGGTGCAGAGGG
CTCTTGCGACTTAAAGGGATCGTGGGACCAGGTATCCCAAGTCATCGGAT
ACGCCCATACGCTGATTCACCAGGAAGGCATCGCCAGGATTCAGACGGAC
ATTCGCATCACCACTAGATCGGCTCTCAAAGCGCATCCTTCTCCAAGCAG
GTTGCGGATATCCAGCGTCTGATGCAGAACTCCGGTCTCAAGTATCAGAT
GCACGCCACTGGAACTATAGTTGATGGCTTCATTCAATCCAACCTTGAAA
ACCCCCGAGTACTGCACTGCAGACTTCTCTCTAATTCCAGACCGACAAGG
TGCAGCCTATGGAGGCCAATATAGCCTCGGTGCAGAGGGCTCTTGCGACT
TAAAGGGATCGTGGGACCAGGTATCCCAAGTCATCGGATACGCCCATACG
CTGATTCACCAGGAAGGCATCGCCAGGATTCAGACGGACATTCGCATCAC
CACTAGATCGGCTCTCAAAGCGCATCCTTCTCCAAGCAGGTTGCGGATAT
CCAGCGTCTGATGCAGAACTCCGGTCTCAAGTATCAGATGCACGCCACTG
GAACTATAGTTGATGGCTTCATTCAATCCAACCTTGAAAACCCCCGAGTA
CTGCACTGCAGACTTCTCTCTAATTCCAGACCGACAAGGTGCAGCCTATG
GAGGCCAATATAGCCTCGGTGCAGAGGGCTCTTGCGACTTAAAGGGATCG
TGGGACCAGGTATCCCAAGTCATCGGATACGCCCATACGCTGATTCACCA
GGAAGGCATCGCCAGGATTCAGACGGACATTCGCATCACCACTAGATCGG
CTCTCAAAGCGCATCCTTCTCCAAGCAGGTTGCGGATATCCAGCGTCTGA
TGCAGAACTCCGGTCTCAAGTATCAGATGCACGCCACTGGAACTATAGTT
GATGGCTTCATTCAATCCAACCTTGAAAACCCCCGAGTACTGCACTGCAG
ACTTCTCTCTAATTCCAGACCGACAAGGTGCAGCCTATGGAGGCCAATAT
AGCCTCGGTGCAGAGGGCTCTTGCGACTTAAAGGGATCGTGGGACCAGGT
ATCCCAAGTCATCGGATACGCCCATACGCTGATTCACCAGGAAGGCATCG
CCAGGATTCAGACGGACATTCGCATCACCACTAGATCGGCTCTCAAAGCG
CATCCTTCTCCAAGCAGGTTGCGGATATCCAGCGTCTGATGCAGAACTCC
GGTCTCAAGTATCAGATGCACGCCACTGGAACTATAGTTGATGGCTTCAT
TCAATCCAACCTTGAAAACCCCCGAGTACTGCACTGCAGACTTCTCTCTA
ATTCCA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_001018ATCC10864_001018Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001018-T1ATCC10864_001018-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001018-T1.cdsATCC10864_001018-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001018-T1.exon4ATCC10864_001018-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_001018-T1.exon3ATCC10864_001018-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_001018-T1.exon2ATCC10864_001018-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_001018-T1.exon1ATCC10864_001018-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR029756
InterProIPR002767
PFAMPF01910
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000019supercontigMCQH01000019:660540..661198 -