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ATCC10864_001023-T1, ATCC10864_001023-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_001023-T1
Unique NameATCC10864_001023-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000019:670880..673120+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_001023-T1 ID=ATCC10864_001023-T1|Name=ATCC10864_001023-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=2241bp|location=Sequence derived from alignment at MCQH01000019:670880..673120+ (Aspergillus niger ATCC 10864)
ATGGCCGACCAGACCCCCGATTCCTGGGAGGATGAGCTCTCCAGACAGAC
TGAGGGCGTCCGTCTGAACCCCAACGCACAAGGCCGCCCTCAGCCTCAGG
CTCCTTCTTTCCACCCTGGTGCTGCCACTTTCACCCCCGGCGCTGCTTCC
TTCGTCCCTGGACAGGCCTACCAGCCCTACGGCGGCGGTTTCCCGCAATA
TGGCCAGTACGGCCAGCAGGCTTACGGTGGATACCCTTATGACCAGCAGC
AGCAGGCCTATGCCCAATACGGCGCCTACGCTCAGCAACCTGGTGGCTTT
AACAACAACCAGATCTACAACCAGCAATACGGTGGTTACCAGCAGCAGCA
ACAGCAGCCCCGTCAAGCTGCCGCCCCCGCTGCCGCCCAGCCCGCTCAGC
CCGCCCCGAAGCCTGCCGCAAGCAACGCTGCTCCCCCCAAGGCCAAGGTC
CTGTCTATTGGCGGCGCCAGCAACTCCCCCGCCGCTCCCAAGACCAAGGT
TCTTTCCATCGGCACCCCCTCCCCCGCTCCCACCTCGAGCACGCCTTCTT
CGACCTCCGGTGCCGCTACGCCTGGAGATACCAAGGGTGCTGCCGCTGTT
GAGGCGGCCGCTAAGGTGACGGCTTCCAAGGCCATCGAGAAGACTGAGAA
GAAGGCCGACGCGAAGGCTGCCGCCAGCGGCAAGTCGTCCCCTACCCCCT
CGGGTCGCTCCAGCCCCGGAAGATCCAGCCCTGCTCGCGGCGAGGCTGCC
AAGGCTGCTCGTAACGCCGACGCCGTCGCCATGGAGCAACAAGCCGATGT
CGATGAGGCTACTTTGAAGGAAATCTACGGTGAGAAGAAGGAGCACGTCA
ACATTGTCTTCATCGGTCACGTCGATGCCGGAAAGTCTACTTTGGGTGGA
TCCATCCTTTACGTGACCGGCATGGTGGACGAGCGTACTTTGGAGAAGTA
CAAGAGAGATGCCAAGGAGGCTGGTCGTGAGACCTGGTACCTCTCTTGGG
CCTTGGATTTGACCAACGAGGAACGTGCCAAGGGTAAGACTGTTGAGGTT
GGTCGTGCTCACTTCCAGCTCCCCGTCAAGGGAGCCGACGGCAGCACCAT
CACGAGACATTTCTCCATCCTGGATGCTCCTGGTCACAAGTCTTATGTTC
ACCACATGATCGGTGGTGCTTCCCAGGCCGATGTTGGTGTCCTTGTCATC
TCCGCGCGTAAGGGTGAATACGAAACCGGTTTCGAGAAGGGTGGTCAGAC
TCGTGAGCACGCCCTGCTTGCAAGAAACACCGGTGTGAAGACCCTTATCG
TCGCTGTCAACAAGATGGACGACCCTACCGTTGAGTGGAGCAAGGCTCGT
TTCGACGAGTGTACCGTCAAGGTGGGCAAGTACTTGGAGAACCTCGGTTA
CAAGAAGAGCGATCTCTTCTTCATGCCCATCTCTGCCCAGAGGACCACGG
GTATCAAGGACCGCGTCCCCACGGACCTTGCTCCCTGGTATGGCGGTCCC
TCCCTTTTGGAGTTCCTGTCGGAGATGAAGGTGCCCGAGCGTAAGATCAA
CGCACCTTTCATGATGCCCATCAGTGCCAAGTACCGTGACATGGGTACCA
TGGTCGAGGGTCGCATTGAGTCTGGTGTGCTTAAGAAGAACGGCAGCTGC
ATCATGATGCCCAACCGCACCAAGGTCGAAATTGCCGCTCTCTATGGTGA
GACTGAAGACGAAATCCCCACCGCTACCTGCGGTGACCAGGTCCGTCTTC
GTCTCCGTGGTGTGGAAGAAGAAGATATCTTGCCCGGATTCGTGCTCTGC
TCCCCCAAGCGTCTGGTGAACTGTGTCAAGACTTTCGAGGCCAAGATCAG
GATTCTTGACCTGAAGAGCATTCTCACGGCTGGTTACAACTGCGTGATGC
ACGTGCACTCTGCTGTCGAAGAAGTTACTGTTGCAGCACTTCTGCACAAG
TGCGAGCCCGGCACTGGACGTCGGAGCAAGCGCCCCCCTCCTTTCGCTAG
CAAGGGTCAGACCATCATCGCTCGTCTCGAGGTGACGAGCACTGCTGGTG
CCGTTTGTGTCGAGCGCTTTGAGGACTACAACCAGATGGGTCGGTTTACT
CTGCGTGATCAGGTAAGCAGTCATTTCCAAAGTGCCATTATTGAACAATG
CTAACATACACAAAACCAGGGTCAAACCGTTGCCATTGGTATGATTACCA
AGCTCATCTCTGCCGAAGAGGTGGCGCAGGCGCAGGCGTAA
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Coding sequence (CDS) from alignment at MCQH01000019:670880..673120+

>ATCC10864_001023-T1 ID=ATCC10864_001023-T1|Name=ATCC10864_001023-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=4368bp|location=Sequence derived from alignment at MCQH01000019:670880..673120+ (Aspergillus niger ATCC 10864)
ATGGCCGACCAGACCCCCGATTCCTGGGAGGATGAGCTCTCCAGACAGAC
TGAGGGCGTCCGTCTGAACCCCAACGCACAAGGCCGCCCTCAGCCTCAGG
CTCCTTCTTTCCACCCTGGTGCTGCCACTTTCACCCCCGGCGCTGCTTCC
TTCGTCCCTGGACAGGCCTACCAGCCCTACGGCGGCGGTTTCCCGCAATA
TGGCCAGTACGGCCAGCAGGCTTACGGTGGATACCCTTATGACCAGCAGC
AGCAGGCCTATGCCCAATACGGCGCCTACGCTCAGCAACCTGGTGGCTTT
AACAACAACCAGATCTACAACCAGCAATACGGTGGTTACCAGCAGCAGCA
ACAGCAGCCCCGTCAAGCTGCCGCCCCCGCTGCCGCCCAGCCCGCTCAGC
CCGCCCCGAAGCCTGCCGCAAGCAACGCTGCTCCCCCCAAGGCCAAGGTC
CTGTCTATTGGCGGCGCCAGCAACTCCCCCGCCGCTCCCAAGACCAAGGT
TCTTTCCATCGGCACCCCCTCCCCCGCTCCCACCTCGAGCACGCCTTCTT
CGACCTCCGGTGCCGCTACGCCTGGAGATACCAAGGGTGCTGCCGCTGTT
GAGGCGGCCGCTAAGGTGACGGCTTCCAAGGCCATCGAGAAGACTGAGAA
GAAGGCCGACGCGAAGGCTGCCGCCAGCGGCAAGTCGTCCCCTACCCCCT
CGGGTCGCTCCAGCCCCGGAAGATCCAGCCCTGCTCGCGGCGAGGCTGCC
AAGGCTGCTCGTAACGCCGACGCCGTCGCCATGGAGCAACAAGCCGATGT
CGATGAGGCTACTTTGAAGGAAATCTACGGTGAGAAGAAGGAGCACGTCA
ACATTGTCTTCATCGGTCACGTCGATGCCGGAAAGTCTACTTTGGGTGGA
TCCATCCTTTACGTGACCGGCATGGTGGACGAGCGTACTTTGGAGAAGTA
CAAGAGAGATGCCAAGGAGGCTGGTCGTGAGACCTGGTACCTCTCTTGGG
CCTTGGATTTGACCAACGAGGAACGTGCCAAGGGTAAGACTGTTGAGGTT
GGTCGTGCTCACTTCCAGCTCCCCGTCAAGGGAGCCGACGGCAGCACCAT
CACGAGACATTTCTCCATCCTGGATGCTCCTGGTCACAAGTCTTATGTTC
ACCACATGATCGGTGGTGCTTCCCAGGCCGATGTTGGTGTCCTTGTCATC
TCCGCGCGTAAGGGTGAATACGAAACCGGTTTCGAGAAGGGTGGTCAGAC
TCGTGAGCACGCCCTGCTTGCAAGAAACACCGGTGTGAAGACCCTTATCG
TCGCTGTCAACAAGATGGACGACCCTACCGTTGAGTGGAGCAAGGCTCGT
TTCGACGAGTGTACCGTCAAGGTGGGCAAGTACTTGGAGAACCTCGGTTA
CAAGAAGAGCGATCTCTTCTTCATGCCCATCTCTGCCCAGAGGACCACGG
GTATCAAGGACCGCGTCCCCACGGACCTTGCTCCCTGGTATGGCGGTCCC
TCCCTTTTGGAGTTCCTGTCGGAGATGAAGGTGCCCGAGCGTAAGATCAA
CGCACCTTTCATGATGCCCATCAGTGCCAAGTACCGTGACATGGGTACCA
TGGTCGAGGGTCGCATTGAGTCTGGTGTGCTTAAGAAGAACGGCAGCTGC
ATCATGATGCCCAACCGCACCAAGGTCGAAATTGCCGCTCTCTATGGTGA
GACTGAAGACGAAATCCCCACCGCTACCTGCGGTGACCAGGTCCGTCTTC
GTCTCCGTGGTGTGGAAGAAGAAGATATCTTGCCCGGATTCGTGCTCTGC
TCCCCCAAGCGTCTGGTGAACTGTGTCAAGACTTTCGAGGCCAAGATCAG
GATTCTTGACCTGAAGAGCATTCTCACGGCTGGTTACAACTGCGTGATGC
ACGTGCACTCTGCTGTCGAAGAAGTTACTGTTGCAGCACTTCTGCACAAG
TGCGAGCCCGGCACTGGACGTCGGAGCAAGCGCCCCCCTCCTTTCGCTAG
CAAGGGTCAGACCATCATCGCTCGTCTCGAGGTGACGAGCACTGCTGGTG
CCGTTTGTGTCGAGCGCTTTGAGGACTACAACCAGATGGGTCGGTTTACT
CTGCGTGATCAGGGTCAAACCGTTGCCATTGGTATGATTACCAAGCTCAT
CTCTGCCGAAGAGGTGGCGCAGGCGCAGGCGTAAATGGCCGACCAGACCC
CCGATTCCTGGGAGGATGAGCTCTCCAGACAGACTGAGGGCGTCCGTCTG
AACCCCAACGCACAAGGCCGCCCTCAGCCTCAGGCTCCTTCTTTCCACCC
TGGTGCTGCCACTTTCACCCCCGGCGCTGCTTCCTTCGTCCCTGGACAGG
CCTACCAGCCCTACGGCGGCGGTTTCCCGCAATATGGCCAGTACGGCCAG
CAGGCTTACGGTGGATACCCTTATGACCAGCAGCAGCAGGCCTATGCCCA
ATACGGCGCCTACGCTCAGCAACCTGGTGGCTTTAACAACAACCAGATCT
ACAACCAGCAATACGGTGGTTACCAGCAGCAGCAACAGCAGCCCCGTCAA
GCTGCCGCCCCCGCTGCCGCCCAGCCCGCTCAGCCCGCCCCGAAGCCTGC
CGCAAGCAACGCTGCTCCCCCCAAGGCCAAGGTCCTGTCTATTGGCGGCG
CCAGCAACTCCCCCGCCGCTCCCAAGACCAAGGTTCTTTCCATCGGCACC
CCCTCCCCCGCTCCCACCTCGAGCACGCCTTCTTCGACCTCCGGTGCCGC
TACGCCTGGAGATACCAAGGGTGCTGCCGCTGTTGAGGCGGCCGCTAAGG
TGACGGCTTCCAAGGCCATCGAGAAGACTGAGAAGAAGGCCGACGCGAAG
GCTGCCGCCAGCGGCAAGTCGTCCCCTACCCCCTCGGGTCGCTCCAGCCC
CGGAAGATCCAGCCCTGCTCGCGGCGAGGCTGCCAAGGCTGCTCGTAACG
CCGACGCCGTCGCCATGGAGCAACAAGCCGATGTCGATGAGGCTACTTTG
AAGGAAATCTACGGTGAGAAGAAGGAGCACGTCAACATTGTCTTCATCGG
TCACGTCGATGCCGGAAAGTCTACTTTGGGTGGATCCATCCTTTACGTGA
CCGGCATGGTGGACGAGCGTACTTTGGAGAAGTACAAGAGAGATGCCAAG
GAGGCTGGTCGTGAGACCTGGTACCTCTCTTGGGCCTTGGATTTGACCAA
CGAGGAACGTGCCAAGGGTAAGACTGTTGAGGTTGGTCGTGCTCACTTCC
AGCTCCCCGTCAAGGGAGCCGACGGCAGCACCATCACGAGACATTTCTCC
ATCCTGGATGCTCCTGGTCACAAGTCTTATGTTCACCACATGATCGGTGG
TGCTTCCCAGGCCGATGTTGGTGTCCTTGTCATCTCCGCGCGTAAGGGTG
AATACGAAACCGGTTTCGAGAAGGGTGGTCAGACTCGTGAGCACGCCCTG
CTTGCAAGAAACACCGGTGTGAAGACCCTTATCGTCGCTGTCAACAAGAT
GGACGACCCTACCGTTGAGTGGAGCAAGGCTCGTTTCGACGAGTGTACCG
TCAAGGTGGGCAAGTACTTGGAGAACCTCGGTTACAAGAAGAGCGATCTC
TTCTTCATGCCCATCTCTGCCCAGAGGACCACGGGTATCAAGGACCGCGT
CCCCACGGACCTTGCTCCCTGGTATGGCGGTCCCTCCCTTTTGGAGTTCC
TGTCGGAGATGAAGGTGCCCGAGCGTAAGATCAACGCACCTTTCATGATG
CCCATCAGTGCCAAGTACCGTGACATGGGTACCATGGTCGAGGGTCGCAT
TGAGTCTGGTGTGCTTAAGAAGAACGGCAGCTGCATCATGATGCCCAACC
GCACCAAGGTCGAAATTGCCGCTCTCTATGGTGAGACTGAAGACGAAATC
CCCACCGCTACCTGCGGTGACCAGGTCCGTCTTCGTCTCCGTGGTGTGGA
AGAAGAAGATATCTTGCCCGGATTCGTGCTCTGCTCCCCCAAGCGTCTGG
TGAACTGTGTCAAGACTTTCGAGGCCAAGATCAGGATTCTTGACCTGAAG
AGCATTCTCACGGCTGGTTACAACTGCGTGATGCACGTGCACTCTGCTGT
CGAAGAAGTTACTGTTGCAGCACTTCTGCACAAGTGCGAGCCCGGCACTG
GACGTCGGAGCAAGCGCCCCCCTCCTTTCGCTAGCAAGGGTCAGACCATC
ATCGCTCGTCTCGAGGTGACGAGCACTGCTGGTGCCGTTTGTGTCGAGCG
CTTTGAGGACTACAACCAGATGGGTCGGTTTACTCTGCGTGATCAGGGTC
AAACCGTTGCCATTGGTATGATTACCAAGCTCATCTCTGCCGAAGAGGTG
GCGCAGGCGCAGGCGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0000288nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
GO:0006415translational termination
Vocabulary: Molecular Function
TermDefinition
GO:0003924GTPase activity
GO:0003747translation release factor activity
GO:0005525GTP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SUP35ATCC10864_001023Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001023-T1.exon1ATCC10864_001023-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_001023-T1.exon2ATCC10864_001023-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001023-T1.cdsATCC10864_001023-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001023-T1ATCC10864_001023-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF03143
InterProIPR004160
InterProIPR003285
PFAMPF00009
InterProIPR009000
InterProIPR004161
PFAMPF03144
InterProIPR000795
InterProIPR009001
InterProIPR027417
Properties
Property NameValue
NoteBUSCO:EOG09261PUF
Producttranslation termination factor GTPase eRF3
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000019supercontigMCQH01000019:670880..673120 +
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