You are here

ATCC10864_001054-T1, ATCC10864_001054-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_001054-T1
Unique NameATCC10864_001054-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000019:775765..777017-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_001054-T1 ID=ATCC10864_001054-T1|Name=ATCC10864_001054-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1253bp|location=Sequence derived from alignment at MCQH01000019:775765..777017- (Aspergillus niger ATCC 10864)
ATGGGTGCTATGTCGCTGCCTTCAGACGAGATCCCCCAGACTCAAACGGT GGCTCTCGTTCGAGAACTGGGAGGCAGTGTGGAGTTTCGTGAAGGCTATC CCGTTCCTACCCCGGGGTCGAATGAGGTATTAGCGAAGGTTCTGTATACA GGTGTCTGCCAAAGTGGTCAGTCTTGATGAACCTCTGTCATACAATACTT CCCAGAGGCTAACGCGATCGGAAAAGATTTACATACAAAAAACGGCACTG CGGCTGGCGCTGATGGCAACCCAATCACGAAGATCAAACTGCCGCATGTT GGAGGTCATGAAGGTGTCGGGCAGATCGTGGCTCTGGGTCCCAACTGTGG CGCTGACCTGAAGGTCGGCGGGCTAGTCGGCATTCGCTTCGCTAGTCGGA TTTGTAGGAGATGCGAGTTCTGCTTAGCCGGTACGGAGCAGTACTGTGTC AAGGGCACGAACCATCTCCATCATGAAGACGGCAGCTTCCAGGAGTATAT CGCTCTGGATGCTGACAACCTCACGATTCTCCCTGATGATATAGATCCAA AGGTTATCGGGCCGGTGCTGTGTGCTGGAGTAACAGCATACAAGGTTAAT CAGTTCTAAGCACAAAGCATGGGATCTGATTGCTGACAGTTCGTAGGCTG TTCTTAATACGAATATCCGGGCCGGCAACTGGCTCGTTGTAGTAGGTGCT GGAGGTGGTCTTGGGCATCTGGCTGGTAAGTTGGGCGCATTTCGCAAGGC TACAACAAACTGACCGAACAGTTCAATATGCCAAGGCACAAGGAGCACTG GTTATTGGCGTCGACGCTGCCGACAAGCGAGACTTTGTCCTTGGTTTGGG AGCAACAGAGTTCATTGATTTTACTTCCACGGATCCGGTGCAGAAAGTTC ATGAAATTACCGGCCTTGGTGCGCATGCCGTTGTGGTGACTGCGGGAAGT GCCAAAGCCTTTGCCCATGCTTGTGACATGTTGCGGGTTGGGGGTACTCT AAGCTGCGTGGGAATCCCGCCAGGCCGTCCAGTTCTGGAAACCCCTATTT GCACAATCGTGATCAAAGGCCTCCGGGTTACCGGGAATCTCATCGGCTCA CTAAAAGAGTGCATGGAGGCAGTGGACTTGGTCCGGCGTGGGGTGGTCAA ACCGGAAATCAAGGTCCGGACCTTCAAGGAGTTGCCACAGGTATACGAGG AGATGGAGAAGGGTGATATTGCAGGTAGAATCGTCCTTCAAGTTTCGCAG TAG
back to top

Coding sequence (CDS) from alignment at MCQH01000019:775765..777017-

>ATCC10864_001054-T1 ID=ATCC10864_001054-T1|Name=ATCC10864_001054-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=4380bp|location=Sequence derived from alignment at MCQH01000019:775765..777017- (Aspergillus niger ATCC 10864)
TTCAATATGCCAAGGCACAAGGAGCACTGGTTATTGGCGTCGACGCTGCC
GACAAGCGAGACTTTGTCCTTGGTTTGGGAGCAACAGAGTTCATTGATTT
TACTTCCACGGATCCGGTGCAGAAAGTTCATGAAATTACCGGCCTTGGTG
CGCATGCCGTTGTGGTGACTGCGGGAAGTGCCAAAGCCTTTGCCCATGCT
TGTGACATGTTGCGGGTTGGGGGTACTCTAAGCTGCGTGGGAATCCCGCC
AGGCCGTCCAGTTCTGGAAACCCCTATTTGCACAATCGTGATCAAAGGCC
TCCGGGTTACCGGGAATCTCATCGGCTCACTAAAAGAGTGCATGGAGGCA
GTGGACTTGGTCCGGCGTGGGGTGGTCAAACCGGAAATCAAGGTCCGGAC
CTTCAAGGAGTTGCCACAGGTATACGAGGAGATGGAGAAGGGTGATATTG
CAGGTAGAATCGTCCTTCAAGTTTCGCAGTAGGCTGTTCTTAATACGAAT
ATCCGGGCCGGCAACTGGCTCGTTGTAGTAGGTGCTGGAGGTGGTCTTGG
GCATCTGGCTGATTTACATACAAAAAACGGCACTGCGGCTGGCGCTGATG
GCAACCCAATCACGAAGATCAAACTGCCGCATGTTGGAGGTCATGAAGGT
GTCGGGCAGATCGTGGCTCTGGGTCCCAACTGTGGCGCTGACCTGAAGGT
CGGCGGGCTAGTCGGCATTCGCTTCGCTAGTCGGATTTGTAGGAGATGCG
AGTTCTGCTTAGCCGGTACGGAGCAGTACTGTGTCAAGGGCACGAACCAT
CTCCATCATGAAGACGGCAGCTTCCAGGAGTATATCGCTCTGGATGCTGA
CAACCTCACGATTCTCCCTGATGATATAGATCCAAAGGTTATCGGGCCGG
TGCTGTGTGCTGGAGTAACAGCATACAAGATGGGTGCTATGTCGCTGCCT
TCAGACGAGATCCCCCAGACTCAAACGGTGGCTCTCGTTCGAGAACTGGG
AGGCAGTGTGGAGTTTCGTGAAGGCTATCCCGTTCCTACCCCGGGGTCGA
ATGAGGTATTAGCGAAGGTTCTGTATACAGGTGTCTGCCAAAGTGTTCAA
TATGCCAAGGCACAAGGAGCACTGGTTATTGGCGTCGACGCTGCCGACAA
GCGAGACTTTGTCCTTGGTTTGGGAGCAACAGAGTTCATTGATTTTACTT
CCACGGATCCGGTGCAGAAAGTTCATGAAATTACCGGCCTTGGTGCGCAT
GCCGTTGTGGTGACTGCGGGAAGTGCCAAAGCCTTTGCCCATGCTTGTGA
CATGTTGCGGGTTGGGGGTACTCTAAGCTGCGTGGGAATCCCGCCAGGCC
GTCCAGTTCTGGAAACCCCTATTTGCACAATCGTGATCAAAGGCCTCCGG
GTTACCGGGAATCTCATCGGCTCACTAAAAGAGTGCATGGAGGCAGTGGA
CTTGGTCCGGCGTGGGGTGGTCAAACCGGAAATCAAGGTCCGGACCTTCA
AGGAGTTGCCACAGGTATACGAGGAGATGGAGAAGGGTGATATTGCAGGT
AGAATCGTCCTTCAAGTTTCGCAGTAGGCTGTTCTTAATACGAATATCCG
GGCCGGCAACTGGCTCGTTGTAGTAGGTGCTGGAGGTGGTCTTGGGCATC
TGGCTGATTTACATACAAAAAACGGCACTGCGGCTGGCGCTGATGGCAAC
CCAATCACGAAGATCAAACTGCCGCATGTTGGAGGTCATGAAGGTGTCGG
GCAGATCGTGGCTCTGGGTCCCAACTGTGGCGCTGACCTGAAGGTCGGCG
GGCTAGTCGGCATTCGCTTCGCTAGTCGGATTTGTAGGAGATGCGAGTTC
TGCTTAGCCGGTACGGAGCAGTACTGTGTCAAGGGCACGAACCATCTCCA
TCATGAAGACGGCAGCTTCCAGGAGTATATCGCTCTGGATGCTGACAACC
TCACGATTCTCCCTGATGATATAGATCCAAAGGTTATCGGGCCGGTGCTG
TGTGCTGGAGTAACAGCATACAAGATGGGTGCTATGTCGCTGCCTTCAGA
CGAGATCCCCCAGACTCAAACGGTGGCTCTCGTTCGAGAACTGGGAGGCA
GTGTGGAGTTTCGTGAAGGCTATCCCGTTCCTACCCCGGGGTCGAATGAG
GTATTAGCGAAGGTTCTGTATACAGGTGTCTGCCAAAGTGTTCAATATGC
CAAGGCACAAGGAGCACTGGTTATTGGCGTCGACGCTGCCGACAAGCGAG
ACTTTGTCCTTGGTTTGGGAGCAACAGAGTTCATTGATTTTACTTCCACG
GATCCGGTGCAGAAAGTTCATGAAATTACCGGCCTTGGTGCGCATGCCGT
TGTGGTGACTGCGGGAAGTGCCAAAGCCTTTGCCCATGCTTGTGACATGT
TGCGGGTTGGGGGTACTCTAAGCTGCGTGGGAATCCCGCCAGGCCGTCCA
GTTCTGGAAACCCCTATTTGCACAATCGTGATCAAAGGCCTCCGGGTTAC
CGGGAATCTCATCGGCTCACTAAAAGAGTGCATGGAGGCAGTGGACTTGG
TCCGGCGTGGGGTGGTCAAACCGGAAATCAAGGTCCGGACCTTCAAGGAG
TTGCCACAGGTATACGAGGAGATGGAGAAGGGTGATATTGCAGGTAGAAT
CGTCCTTCAAGTTTCGCAGTAGGCTGTTCTTAATACGAATATCCGGGCCG
GCAACTGGCTCGTTGTAGTAGGTGCTGGAGGTGGTCTTGGGCATCTGGCT
GATTTACATACAAAAAACGGCACTGCGGCTGGCGCTGATGGCAACCCAAT
CACGAAGATCAAACTGCCGCATGTTGGAGGTCATGAAGGTGTCGGGCAGA
TCGTGGCTCTGGGTCCCAACTGTGGCGCTGACCTGAAGGTCGGCGGGCTA
GTCGGCATTCGCTTCGCTAGTCGGATTTGTAGGAGATGCGAGTTCTGCTT
AGCCGGTACGGAGCAGTACTGTGTCAAGGGCACGAACCATCTCCATCATG
AAGACGGCAGCTTCCAGGAGTATATCGCTCTGGATGCTGACAACCTCACG
ATTCTCCCTGATGATATAGATCCAAAGGTTATCGGGCCGGTGCTGTGTGC
TGGAGTAACAGCATACAAGATGGGTGCTATGTCGCTGCCTTCAGACGAGA
TCCCCCAGACTCAAACGGTGGCTCTCGTTCGAGAACTGGGAGGCAGTGTG
GAGTTTCGTGAAGGCTATCCCGTTCCTACCCCGGGGTCGAATGAGGTATT
AGCGAAGGTTCTGTATACAGGTGTCTGCCAAAGTGTTCAATATGCCAAGG
CACAAGGAGCACTGGTTATTGGCGTCGACGCTGCCGACAAGCGAGACTTT
GTCCTTGGTTTGGGAGCAACAGAGTTCATTGATTTTACTTCCACGGATCC
GGTGCAGAAAGTTCATGAAATTACCGGCCTTGGTGCGCATGCCGTTGTGG
TGACTGCGGGAAGTGCCAAAGCCTTTGCCCATGCTTGTGACATGTTGCGG
GTTGGGGGTACTCTAAGCTGCGTGGGAATCCCGCCAGGCCGTCCAGTTCT
GGAAACCCCTATTTGCACAATCGTGATCAAAGGCCTCCGGGTTACCGGGA
ATCTCATCGGCTCACTAAAAGAGTGCATGGAGGCAGTGGACTTGGTCCGG
CGTGGGGTGGTCAAACCGGAAATCAAGGTCCGGACCTTCAAGGAGTTGCC
ACAGGTATACGAGGAGATGGAGAAGGGTGATATTGCAGGTAGAATCGTCC
TTCAAGTTTCGCAGTAGGCTGTTCTTAATACGAATATCCGGGCCGGCAAC
TGGCTCGTTGTAGTAGGTGCTGGAGGTGGTCTTGGGCATCTGGCTGATTT
ACATACAAAAAACGGCACTGCGGCTGGCGCTGATGGCAACCCAATCACGA
AGATCAAACTGCCGCATGTTGGAGGTCATGAAGGTGTCGGGCAGATCGTG
GCTCTGGGTCCCAACTGTGGCGCTGACCTGAAGGTCGGCGGGCTAGTCGG
CATTCGCTTCGCTAGTCGGATTTGTAGGAGATGCGAGTTCTGCTTAGCCG
GTACGGAGCAGTACTGTGTCAAGGGCACGAACCATCTCCATCATGAAGAC
GGCAGCTTCCAGGAGTATATCGCTCTGGATGCTGACAACCTCACGATTCT
CCCTGATGATATAGATCCAAAGGTTATCGGGCCGGTGCTGTGTGCTGGAG
TAACAGCATACAAGATGGGTGCTATGTCGCTGCCTTCAGACGAGATCCCC
CAGACTCAAACGGTGGCTCTCGTTCGAGAACTGGGAGGCAGTGTGGAGTT
TCGTGAAGGCTATCCCGTTCCTACCCCGGGGTCGAATGAGGTATTAGCGA
AGGTTCTGTATACAGGTGTCTGCCAAAGTG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0016491oxidoreductase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_001054ATCC10864_001054Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001054-T1ATCC10864_001054-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001054-T1.cdsATCC10864_001054-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001054-T1.exon4ATCC10864_001054-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_001054-T1.exon3ATCC10864_001054-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_001054-T1.exon2ATCC10864_001054-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_001054-T1.exon1ATCC10864_001054-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF00107
InterProIPR002328
PFAMPF08240
PFAMPF13602
InterProIPR013149
InterProIPR036291
InterProIPR013154
InterProIPR011032
InterProIPR020843
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000019supercontigMCQH01000019:775765..777017 -