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ATCC10864_001063-T1, ATCC10864_001063-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_001063-T1
Unique NameATCC10864_001063-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000019:796108..797747+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_001063-T1 ID=ATCC10864_001063-T1|Name=ATCC10864_001063-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1640bp|location=Sequence derived from alignment at MCQH01000019:796108..797747+ (Aspergillus niger ATCC 10864)
ATGAAGCTCCCCATCCTAGTGACTCTATTTATTACTCTGCCCGCGCTTTG
CGTGTCTAGCAAAACTCCTTCCGCGCCTACGATCTCTGCATATCCGAAAT
CTCCAGGGAACTTCAAGCCCGCCTCTGGACGCCAGAACAGCACAAGCAAC
GTCTGTGAGGTCAAGCCGAACCAAACAGATGCTGCCCCTGGTATTCTTGC
CGCAGCCCACACTTGCAACAATGGGGGCACCGTTTTCCTACCACCGGGTG
ACTTTGTCGTCGCAACCGCACTGGATCTCACATTTCTAAACAACATCGAT
TTTGCCATCTGGGGCAACATCACTTTCAAAAAGGATATCGATCTCTGGAC
AACCCAGGCATTTCAATACACATTCCAGACTGCGAGTCTTTTCTGGCGAT
TCGGAGGCAATAACGTGAACATCTACGGCGATGGGAAGGGGGTGATTGAT
GGTGAATATTTTTTTTCTTGGTGCTGGATTTGCTAGGGAAAGATTAATGA
CCTTGATGTTCTAATATAGGAGCTGGTCAATACTGGTGGAGTGCGATGGC
TGAGGATTCCAGTGTCATGCGTCCTTGCCTCCTGGGCACAGACGGACTGC
ATCATGCCACCATTTCTGGGCTCACGATGCTCAACTCCCCAAATTGGTTC
AACCTGATTGCAAACTCCACGGACATCCTCATCAGTAATATGACAATGTT
GGTGGAGAGTGAGATATCGGATGCTCCAGCCAAGGTGCGACTTATAATAT
CACCCCTGTTTCCATCTGCTATAGCCTACTGCTACCTGAACCTGACTTGT
ACTGTGACTAGAACACAGATGGCTGGGACATCTACCGCAGCTCGAATATC
GTGATCCAAGACTCAAGAATTGTCAACACGGACGGTAAGCCATGGCATTC
CGTAACTGTATTCTCTGAAACGTCACTCATGGTCTCCGCCTTAGACTGTG
TATCGTTCAAACCAAACTCCACCCAGATTGTCATCCAAAATCTCGACTGC
ACTGGTTCCCACGGTATTTCTGTCGGCAGCTTGGGTCAATACCAAGGGGA
AACGGATATCGTCGAAGATCTGTACATCTATAACATCTCCATGACAGATG
CATCAGATGTGGCCCGAATCAAGGTCTGGCCTGGTGTTCCTGCTGATACG
TCAGGATCAACCAGCGGTGGAGGACTAGGCCGCGTCCGCAACGTTACCTA
TGAACACATGCAAAGCGAGAATAACGATCACATCATTTCGGTCTCGCAGT
GCTATGAGTCGAAGAACCAAACGATGTGCGATTCATATCCTGTACGTACT
TACAAGCTCCTGATAGGCAAAAGATTCAATAGCAGCAAAAAACTGATCAG
TCTTTCAAAGTCAAAACTCGTGATTGAGGATGTACTTTTCAAGGACTTTA
AGGGAACGACATCTAAGAAGTACGATCCTGAGATTGGAGAGTTGACATGT
AGTAGTCCGGATGTAGGTTTCTTTGCTGCAACTTTGCATTGCAGATTGAC
CCACGGCCACTAACAGCTGCTAGGTCTGCCATAATATCACTGTCCAAGAC
ATCAATGTGACTCCACCCAGTGGTGACTCTCCCACTTTCACCTGCAACAA
TATGGGGAATTCGAATTTGGAGGACATTACGTGTGCCTGA
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Coding sequence (CDS) from alignment at MCQH01000019:796108..797747+

>ATCC10864_001063-T1 ID=ATCC10864_001063-T1|Name=ATCC10864_001063-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=7830bp|location=Sequence derived from alignment at MCQH01000019:796108..797747+ (Aspergillus niger ATCC 10864)
ATGAAGCTCCCCATCCTAGTGACTCTATTTATTACTCTGCCCGCGCTTTG
CGTGTCTAGCAAAACTCCTTCCGCGCCTACGATCTCTGCATATCCGAAAT
CTCCAGGGAACTTCAAGCCCGCCTCTGGACGCCAGAACAGCACAAGCAAC
GTCTGTGAGGTCAAGCCGAACCAAACAGATGCTGCCCCTGGTATTCTTGC
CGCAGCCCACACTTGCAACAATGGGGGCACCGTTTTCCTACCACCGGGTG
ACTTTGTCGTCGCAACCGCACTGGATCTCACATTTCTAAACAACATCGAT
TTTGCCATCTGGGGCAACATCACTTTCAAAAAGGATATCGATCTCTGGAC
AACCCAGGCATTTCAATACACATTCCAGACTGCGAGTCTTTTCTGGCGAT
TCGGAGGCAATAACGTGAACATCTACGGCGATGGGAAGGGGGTGATTGAT
GGAGCTGGTCAATACTGGTGGAGTGCGATGGCTGAGGATTCCAGTGTCAT
GCGTCCTTGCCTCCTGGGCACAGACGGACTGCATCATGCCACCATTTCTG
GGCTCACGATGCTCAACTCCCCAAATTGGTTCAACCTGATTGCAAACTCC
ACGGACATCCTCATCAGTAATATGACAATGTTGGTGGAGAGTGAGATATC
GGATGCTCCAGCCAAGAACACAGATGGCTGGGACATCTACCGCAGCTCGA
ATATCGTGATCCAAGACTCAAGAATTGTCAACACGGACGACTGTGTATCG
TTCAAACCAAACTCCACCCAGATTGTCATCCAAAATCTCGACTGCACTGG
TTCCCACGGTATTTCTGTCGGCAGCTTGGGTCAATACCAAGGGGAAACGG
ATATCGTCGAAGATCTGTACATCTATAACATCTCCATGACAGATGCATCA
GATGTGGCCCGAATCAAGGTCTGGCCTGGTGTTCCTGCTGATACGTCAGG
ATCAACCAGCGGTGGAGGACTAGGCCGCGTCCGCAACGTTACCTATGAAC
ACATGCAAAGCGAGAATAACGATCACATCATTTCGGTCTCGCAGTGCTAT
GAGTCGAAGAACCAAACGATGTGCGATTCATATCCTTCAAAACTCGTGAT
TGAGGATGTACTTTTCAAGGACTTTAAGGGAACGACATCTAAGAAGTACG
ATCCTGAGATTGGAGAGTTGACATGTAGTAGTCCGGATGTCTGCCATAAT
ATCACTGTCCAAGACATCAATGTGACTCCACCCAGTGGTGACTCTCCCAC
TTTCACCTGCAACAATATGGGGAATTCGAATTTGGAGGACATTACGTGTG
CCTGAATGAAGCTCCCCATCCTAGTGACTCTATTTATTACTCTGCCCGCG
CTTTGCGTGTCTAGCAAAACTCCTTCCGCGCCTACGATCTCTGCATATCC
GAAATCTCCAGGGAACTTCAAGCCCGCCTCTGGACGCCAGAACAGCACAA
GCAACGTCTGTGAGGTCAAGCCGAACCAAACAGATGCTGCCCCTGGTATT
CTTGCCGCAGCCCACACTTGCAACAATGGGGGCACCGTTTTCCTACCACC
GGGTGACTTTGTCGTCGCAACCGCACTGGATCTCACATTTCTAAACAACA
TCGATTTTGCCATCTGGGGCAACATCACTTTCAAAAAGGATATCGATCTC
TGGACAACCCAGGCATTTCAATACACATTCCAGACTGCGAGTCTTTTCTG
GCGATTCGGAGGCAATAACGTGAACATCTACGGCGATGGGAAGGGGGTGA
TTGATGGAGCTGGTCAATACTGGTGGAGTGCGATGGCTGAGGATTCCAGT
GTCATGCGTCCTTGCCTCCTGGGCACAGACGGACTGCATCATGCCACCAT
TTCTGGGCTCACGATGCTCAACTCCCCAAATTGGTTCAACCTGATTGCAA
ACTCCACGGACATCCTCATCAGTAATATGACAATGTTGGTGGAGAGTGAG
ATATCGGATGCTCCAGCCAAGAACACAGATGGCTGGGACATCTACCGCAG
CTCGAATATCGTGATCCAAGACTCAAGAATTGTCAACACGGACGACTGTG
TATCGTTCAAACCAAACTCCACCCAGATTGTCATCCAAAATCTCGACTGC
ACTGGTTCCCACGGTATTTCTGTCGGCAGCTTGGGTCAATACCAAGGGGA
AACGGATATCGTCGAAGATCTGTACATCTATAACATCTCCATGACAGATG
CATCAGATGTGGCCCGAATCAAGGTCTGGCCTGGTGTTCCTGCTGATACG
TCAGGATCAACCAGCGGTGGAGGACTAGGCCGCGTCCGCAACGTTACCTA
TGAACACATGCAAAGCGAGAATAACGATCACATCATTTCGGTCTCGCAGT
GCTATGAGTCGAAGAACCAAACGATGTGCGATTCATATCCTTCAAAACTC
GTGATTGAGGATGTACTTTTCAAGGACTTTAAGGGAACGACATCTAAGAA
GTACGATCCTGAGATTGGAGAGTTGACATGTAGTAGTCCGGATGTCTGCC
ATAATATCACTGTCCAAGACATCAATGTGACTCCACCCAGTGGTGACTCT
CCCACTTTCACCTGCAACAATATGGGGAATTCGAATTTGGAGGACATTAC
GTGTGCCTGAATGAAGCTCCCCATCCTAGTGACTCTATTTATTACTCTGC
CCGCGCTTTGCGTGTCTAGCAAAACTCCTTCCGCGCCTACGATCTCTGCA
TATCCGAAATCTCCAGGGAACTTCAAGCCCGCCTCTGGACGCCAGAACAG
CACAAGCAACGTCTGTGAGGTCAAGCCGAACCAAACAGATGCTGCCCCTG
GTATTCTTGCCGCAGCCCACACTTGCAACAATGGGGGCACCGTTTTCCTA
CCACCGGGTGACTTTGTCGTCGCAACCGCACTGGATCTCACATTTCTAAA
CAACATCGATTTTGCCATCTGGGGCAACATCACTTTCAAAAAGGATATCG
ATCTCTGGACAACCCAGGCATTTCAATACACATTCCAGACTGCGAGTCTT
TTCTGGCGATTCGGAGGCAATAACGTGAACATCTACGGCGATGGGAAGGG
GGTGATTGATGGAGCTGGTCAATACTGGTGGAGTGCGATGGCTGAGGATT
CCAGTGTCATGCGTCCTTGCCTCCTGGGCACAGACGGACTGCATCATGCC
ACCATTTCTGGGCTCACGATGCTCAACTCCCCAAATTGGTTCAACCTGAT
TGCAAACTCCACGGACATCCTCATCAGTAATATGACAATGTTGGTGGAGA
GTGAGATATCGGATGCTCCAGCCAAGAACACAGATGGCTGGGACATCTAC
CGCAGCTCGAATATCGTGATCCAAGACTCAAGAATTGTCAACACGGACGA
CTGTGTATCGTTCAAACCAAACTCCACCCAGATTGTCATCCAAAATCTCG
ACTGCACTGGTTCCCACGGTATTTCTGTCGGCAGCTTGGGTCAATACCAA
GGGGAAACGGATATCGTCGAAGATCTGTACATCTATAACATCTCCATGAC
AGATGCATCAGATGTGGCCCGAATCAAGGTCTGGCCTGGTGTTCCTGCTG
ATACGTCAGGATCAACCAGCGGTGGAGGACTAGGCCGCGTCCGCAACGTT
ACCTATGAACACATGCAAAGCGAGAATAACGATCACATCATTTCGGTCTC
GCAGTGCTATGAGTCGAAGAACCAAACGATGTGCGATTCATATCCTTCAA
AACTCGTGATTGAGGATGTACTTTTCAAGGACTTTAAGGGAACGACATCT
AAGAAGTACGATCCTGAGATTGGAGAGTTGACATGTAGTAGTCCGGATGT
CTGCCATAATATCACTGTCCAAGACATCAATGTGACTCCACCCAGTGGTG
ACTCTCCCACTTTCACCTGCAACAATATGGGGAATTCGAATTTGGAGGAC
ATTACGTGTGCCTGAATGAAGCTCCCCATCCTAGTGACTCTATTTATTAC
TCTGCCCGCGCTTTGCGTGTCTAGCAAAACTCCTTCCGCGCCTACGATCT
CTGCATATCCGAAATCTCCAGGGAACTTCAAGCCCGCCTCTGGACGCCAG
AACAGCACAAGCAACGTCTGTGAGGTCAAGCCGAACCAAACAGATGCTGC
CCCTGGTATTCTTGCCGCAGCCCACACTTGCAACAATGGGGGCACCGTTT
TCCTACCACCGGGTGACTTTGTCGTCGCAACCGCACTGGATCTCACATTT
CTAAACAACATCGATTTTGCCATCTGGGGCAACATCACTTTCAAAAAGGA
TATCGATCTCTGGACAACCCAGGCATTTCAATACACATTCCAGACTGCGA
GTCTTTTCTGGCGATTCGGAGGCAATAACGTGAACATCTACGGCGATGGG
AAGGGGGTGATTGATGGAGCTGGTCAATACTGGTGGAGTGCGATGGCTGA
GGATTCCAGTGTCATGCGTCCTTGCCTCCTGGGCACAGACGGACTGCATC
ATGCCACCATTTCTGGGCTCACGATGCTCAACTCCCCAAATTGGTTCAAC
CTGATTGCAAACTCCACGGACATCCTCATCAGTAATATGACAATGTTGGT
GGAGAGTGAGATATCGGATGCTCCAGCCAAGAACACAGATGGCTGGGACA
TCTACCGCAGCTCGAATATCGTGATCCAAGACTCAAGAATTGTCAACACG
GACGACTGTGTATCGTTCAAACCAAACTCCACCCAGATTGTCATCCAAAA
TCTCGACTGCACTGGTTCCCACGGTATTTCTGTCGGCAGCTTGGGTCAAT
ACCAAGGGGAAACGGATATCGTCGAAGATCTGTACATCTATAACATCTCC
ATGACAGATGCATCAGATGTGGCCCGAATCAAGGTCTGGCCTGGTGTTCC
TGCTGATACGTCAGGATCAACCAGCGGTGGAGGACTAGGCCGCGTCCGCA
ACGTTACCTATGAACACATGCAAAGCGAGAATAACGATCACATCATTTCG
GTCTCGCAGTGCTATGAGTCGAAGAACCAAACGATGTGCGATTCATATCC
TTCAAAACTCGTGATTGAGGATGTACTTTTCAAGGACTTTAAGGGAACGA
CATCTAAGAAGTACGATCCTGAGATTGGAGAGTTGACATGTAGTAGTCCG
GATGTCTGCCATAATATCACTGTCCAAGACATCAATGTGACTCCACCCAG
TGGTGACTCTCCCACTTTCACCTGCAACAATATGGGGAATTCGAATTTGG
AGGACATTACGTGTGCCTGAATGAAGCTCCCCATCCTAGTGACTCTATTT
ATTACTCTGCCCGCGCTTTGCGTGTCTAGCAAAACTCCTTCCGCGCCTAC
GATCTCTGCATATCCGAAATCTCCAGGGAACTTCAAGCCCGCCTCTGGAC
GCCAGAACAGCACAAGCAACGTCTGTGAGGTCAAGCCGAACCAAACAGAT
GCTGCCCCTGGTATTCTTGCCGCAGCCCACACTTGCAACAATGGGGGCAC
CGTTTTCCTACCACCGGGTGACTTTGTCGTCGCAACCGCACTGGATCTCA
CATTTCTAAACAACATCGATTTTGCCATCTGGGGCAACATCACTTTCAAA
AAGGATATCGATCTCTGGACAACCCAGGCATTTCAATACACATTCCAGAC
TGCGAGTCTTTTCTGGCGATTCGGAGGCAATAACGTGAACATCTACGGCG
ATGGGAAGGGGGTGATTGATGGAGCTGGTCAATACTGGTGGAGTGCGATG
GCTGAGGATTCCAGTGTCATGCGTCCTTGCCTCCTGGGCACAGACGGACT
GCATCATGCCACCATTTCTGGGCTCACGATGCTCAACTCCCCAAATTGGT
TCAACCTGATTGCAAACTCCACGGACATCCTCATCAGTAATATGACAATG
TTGGTGGAGAGTGAGATATCGGATGCTCCAGCCAAGAACACAGATGGCTG
GGACATCTACCGCAGCTCGAATATCGTGATCCAAGACTCAAGAATTGTCA
ACACGGACGACTGTGTATCGTTCAAACCAAACTCCACCCAGATTGTCATC
CAAAATCTCGACTGCACTGGTTCCCACGGTATTTCTGTCGGCAGCTTGGG
TCAATACCAAGGGGAAACGGATATCGTCGAAGATCTGTACATCTATAACA
TCTCCATGACAGATGCATCAGATGTGGCCCGAATCAAGGTCTGGCCTGGT
GTTCCTGCTGATACGTCAGGATCAACCAGCGGTGGAGGACTAGGCCGCGT
CCGCAACGTTACCTATGAACACATGCAAAGCGAGAATAACGATCACATCA
TTTCGGTCTCGCAGTGCTATGAGTCGAAGAACCAAACGATGTGCGATTCA
TATCCTTCAAAACTCGTGATTGAGGATGTACTTTTCAAGGACTTTAAGGG
AACGACATCTAAGAAGTACGATCCTGAGATTGGAGAGTTGACATGTAGTA
GTCCGGATGTCTGCCATAATATCACTGTCCAAGACATCAATGTGACTCCA
CCCAGTGGTGACTCTCCCACTTTCACCTGCAACAATATGGGGAATTCGAA
TTTGGAGGACATTACGTGTGCCTGAATGAAGCTCCCCATCCTAGTGACTC
TATTTATTACTCTGCCCGCGCTTTGCGTGTCTAGCAAAACTCCTTCCGCG
CCTACGATCTCTGCATATCCGAAATCTCCAGGGAACTTCAAGCCCGCCTC
TGGACGCCAGAACAGCACAAGCAACGTCTGTGAGGTCAAGCCGAACCAAA
CAGATGCTGCCCCTGGTATTCTTGCCGCAGCCCACACTTGCAACAATGGG
GGCACCGTTTTCCTACCACCGGGTGACTTTGTCGTCGCAACCGCACTGGA
TCTCACATTTCTAAACAACATCGATTTTGCCATCTGGGGCAACATCACTT
TCAAAAAGGATATCGATCTCTGGACAACCCAGGCATTTCAATACACATTC
CAGACTGCGAGTCTTTTCTGGCGATTCGGAGGCAATAACGTGAACATCTA
CGGCGATGGGAAGGGGGTGATTGATGGAGCTGGTCAATACTGGTGGAGTG
CGATGGCTGAGGATTCCAGTGTCATGCGTCCTTGCCTCCTGGGCACAGAC
GGACTGCATCATGCCACCATTTCTGGGCTCACGATGCTCAACTCCCCAAA
TTGGTTCAACCTGATTGCAAACTCCACGGACATCCTCATCAGTAATATGA
CAATGTTGGTGGAGAGTGAGATATCGGATGCTCCAGCCAAGAACACAGAT
GGCTGGGACATCTACCGCAGCTCGAATATCGTGATCCAAGACTCAAGAAT
TGTCAACACGGACGACTGTGTATCGTTCAAACCAAACTCCACCCAGATTG
TCATCCAAAATCTCGACTGCACTGGTTCCCACGGTATTTCTGTCGGCAGC
TTGGGTCAATACCAAGGGGAAACGGATATCGTCGAAGATCTGTACATCTA
TAACATCTCCATGACAGATGCATCAGATGTGGCCCGAATCAAGGTCTGGC
CTGGTGTTCCTGCTGATACGTCAGGATCAACCAGCGGTGGAGGACTAGGC
CGCGTCCGCAACGTTACCTATGAACACATGCAAAGCGAGAATAACGATCA
CATCATTTCGGTCTCGCAGTGCTATGAGTCGAAGAACCAAACGATGTGCG
ATTCATATCCTTCAAAACTCGTGATTGAGGATGTACTTTTCAAGGACTTT
AAGGGAACGACATCTAAGAAGTACGATCCTGAGATTGGAGAGTTGACATG
TAGTAGTCCGGATGTCTGCCATAATATCACTGTCCAAGACATCAATGTGA
CTCCACCCAGTGGTGACTCTCCCACTTTCACCTGCAACAATATGGGGAAT
TCGAATTTGGAGGACATTACGTGTGCCTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0004650polygalacturonase activity
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_001063ATCC10864_001063Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001063-T1ATCC10864_001063-T1-proteinAspergillus niger ATCC 10864polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001063-T1.exon1ATCC10864_001063-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_001063-T1.exon2ATCC10864_001063-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_001063-T1.exon3ATCC10864_001063-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_001063-T1.exon4ATCC10864_001063-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_001063-T1.exon5ATCC10864_001063-T1.exon5Aspergillus niger ATCC 10864exon
ATCC10864_001063-T1.exon6ATCC10864_001063-T1.exon6Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001063-T1.cdsATCC10864_001063-T1.cdsAspergillus niger ATCC 10864CDS


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR000743
InterProIPR012334
InterProIPR011050
PFAMPF00295
Properties
Property NameValue
NoteSECRETED:SignalP(1-19)
NoteCAZy:GH28
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000019supercontigMCQH01000019:796108..797747 +
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