You are here

Home

ATCC10864_001166-T1, ATCC10864_001166-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_001166-T1
Unique NameATCC10864_001166-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000019:1080941..1083254-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_001166-T1 ID=ATCC10864_001166-T1|Name=ATCC10864_001166-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=2314bp|location=Sequence derived from alignment at MCQH01000019:1080941..1083254- (Aspergillus niger ATCC 10864)
ATGCCTCTCGGAATTCACAATCCGTTACCTTCATCGTTAGGAAGTATGTT
CCGCGCCGTTTTCGTTCCAATTTCCCCGCAATTCTCTTAAACAGGTGGTT
CGGCTGCGACTAACAATCAGACAGGCGAATGTAGAAAGGCGGGCAAAATC
CTCGCCTCCTTTGTCGATCCACGACAAGCGTTTGGGCCCGATAAAGTGAT
TCCTCCGGAGATTTTGGCAGGAGCCAAGGTAATTAGCAAATTCAATACTG
AGCCTGTTGCTCGAAAGTCGCACCGTCGCTCACGGTTTCTTCCCTAGGGT
CTCGCCGTTCTTACTGTCCTGAAAGCTGGATTTTTGGGCTCAGCTCGGTT
CGGTTCTGGTGTCGTCGTCGCTCGACTAGCTGATGGAACCTGGTCTGCTC
CGTCGGCCATTGCCACTGCTGGTGCTGGGTTCGGAGGTCAGATTGGGTTT
GAGTTAACCGACTTTGTGTTTATCTTGAACGATGCCGCAGCCGTCCGGAC
CTTCTCGCAGGTCGGGACCCTGACGCTAGGTGGAAACGTTTCGATCGCTG
CTGGACCGGTCGGACGAAACGCGGAAGCTGCTGGTGCGGCTAGCACAAAG
GGTGTGGCGGCAGTGTTCTCATACTCCAAGACCAAGGGTCTCTTTGCCGG
TGTCAGTCTGGAGGGAAGCATGCTGGTGGAACGTAAGGATGCGAACGAGA
AGATGTACAACAGCCGGGTTTCGGCACGCCAGCTCCTCAGCGGAACCATT
CGACCTCCCCCGGGCGCGGATCCTCTCCTGACCGTATTGAACTCGCGTGC
GTTCTACGGCAATTCCCGGAATGGTAGTGATATGTACAACGACATCCCCG
TTTATGATGACAGCCATGACGATGTGGTTTGGGAGGGCCGCAGGGGCGAG
GCGTACGGCGAAGGAACGCGGCGCGACCGCACTGGGTTCAGTGGCTCAGG
TTCAGATGACTTCCGGGACCGGCCCCGCCGTGCGAATACATGGGCAGACG
ATATATATGATCGACCTGCTGGAGGGTTGAGCCGTTCATCGACTACTCGG
TACAGCGGTCGCACCGACAATTACGACTCCTTCAACCGCAGCCGGAGCAA
TACCACCCCAATCGACGAGGACTATGTATATTCTGACCGCAAGCCTAGCC
GACCCACAGCTCCAAAACCGGTGTTTGGACAGCGGACCGGGGCGGCTCCT
GCTCTACGCCAGGACCAGGCCATAGCACTGTACACCTTTGATGCGGACCA
GGAAGGTGACTTGGGTTTCAAGAAAGGAGACATCATTACCATCCTCAAGA
GGACTGACAAGAAAGAGGACTGGTGGACCGGGCGGATCGGGAGTCGCGTT
GGCATTTTCCCAAGGTAAGCAGGCCCGCGTTTCGCAGAAACCATGTCTTC
CTCGGCCATGAAACTAATCATTGCTATTCAGTAACTATGTCGAAACTGCT
TAGGAGTCGGCTTGTCCTAGTTGGACTCACGCGGAATGATATTGGACGAT
GCGAGCACTTTTAACGCCTTGTTCCTCTTTACGAATGCTTCGATGTTCCT
TTCTTGTTTGGTATTGAGCTCTCTTGTCATCGTTTAAGACTCACCCCTTT
AGTTTTTGTTCTCTCTTTGCTTTTTCCTGTCGGCTTTCTAGTGTAAGCGC
CGGAGTTGCCTGTTGGGCCGACCAGCGGATTCGGGGTGGCTTTTGAACGG
ATAAGTGACAAAACGGGACAGTTACACCTGTGTATGTGTTCTCTTTGGCG
ATGGTTCTAGCTTTTGGTATATGCTTGTGTGATAGTGTTGGACCACCTCT
GGGTATACATAAGACTTCCCTCTTGCTGTTTTTTTTTTTATTGGGACTCT
AGGTTTATAACAGTCATAAATGGAATATTCCCTCATTGCTGCTGCGCCGA
GGATGAATTGGTTGGACATGTTTTAGATGATTGCAGCGGCTACTTGGCGG
ATATGCTTCTATCCCTTGCGAGGAAGGGAGGATAAATGCGAATAAAGAAA
CGGGTGGCTGCCGTCAGAAAGCTCCGACGAGCGTCAAGGAGTCGTCAGCA
GTCAAGCTCCCAGCGACGTTCAGGTTCCTTGCTCATTGCATTACAGTTAG
ATGCGGTCGGTACATTCCTCGGGAGACTCTCCTGCACCAGATTGAACTCA
ACCGGGACCCGTCCTTCTGGGCCATTGGACCTCGTGGAGCCAGCCCCTCA
GCAACATTCCCGAAGTCATCGGATGAGGCCCGCTCGGCCAATAGAGGTCA
GGAACACCAGGCACGAGACTCGCGACGGGTCTCACGCGAGAAGGCAGAGA
AGCAGTGCGATTGA
back to top

Coding sequence (CDS) from alignment at MCQH01000019:1080941..1083254-

>ATCC10864_001166-T1 ID=ATCC10864_001166-T1|Name=ATCC10864_001166-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=5712bp|location=Sequence derived from alignment at MCQH01000019:1080941..1083254- (Aspergillus niger ATCC 10864)
ATGCGGTCGGTACATTCCTCGGGAGACTCTCCTGCACCAGATTGAACTCA
ACCGGGACCCGTCCTTCTGGGCCATTGGACCTCGTGGAGCCAGCCCCTCA
GCAACATTCCCGAAGTCATCGGATGAGGCCCGCTCGGCCAATAGAGGTCA
GGAACACCAGGCACGAGACTCGCGACGGGTCTCACGCGAGAAGGCAGAGA
AGCAGTGCGATTGAGGTCTCGCCGTTCTTACTGTCCTGAAAGCTGGATTT
TTGGGCTCAGCTCGGTTCGGTTCTGGTGTCGTCGTCGCTCGACTAGCTGA
TGGAACCTGGTCTGCTCCGTCGGCCATTGCCACTGCTGGTGCTGGGTTCG
GAGGTCAGATTGGGTTTGAGTTAACCGACTTTGTGTTTATCTTGAACGAT
GCCGCAGCCGTCCGGACCTTCTCGCAGGTCGGGACCCTGACGCTAGGTGG
AAACGTTTCGATCGCTGCTGGACCGGTCGGACGAAACGCGGAAGCTGCTG
GTGCGGCTAGCACAAAGGGTGTGGCGGCAGTGTTCTCATACTCCAAGACC
AAGGGTCTCTTTGCCGGTGTCAGTCTGGAGGGAAGCATGCTGGTGGAACG
TAAGGATGCGAACGAGAAGATGTACAACAGCCGGGTTTCGGCACGCCAGC
TCCTCAGCGGAACCATTCGACCTCCCCCGGGCGCGGATCCTCTCCTGACC
GTATTGAACTCGCGTGCGTTCTACGGCAATTCCCGGAATGGTAGTGATAT
GTACAACGACATCCCCGTTTATGATGACAGCCATGACGATGTGGTTTGGG
AGGGCCGCAGGGGCGAGGCGTACGGCGAAGGAACGCGGCGCGACCGCACT
GGGTTCAGTGGCTCAGGTTCAGATGACTTCCGGGACCGGCCCCGCCGTGC
GAATACATGGGCAGACGATATATATGATCGACCTGCTGGAGGGTTGAGCC
GTTCATCGACTACTCGGTACAGCGGTCGCACCGACAATTACGACTCCTTC
AACCGCAGCCGGAGCAATACCACCCCAATCGACGAGGACTATGTATATTC
TGACCGCAAGCCTAGCCGACCCACAGCTCCAAAACCGGTGTTTGGACAGC
GGACCGGGGCGGCTCCTGCTCTACGCCAGGACCAGGCCATAGCACTGTAC
ACCTTTGATGCGGACCAGGAAGGTGACTTGGGTTTCAAGAAAGGAGACAT
CATTACCATCCTCAAGAGGACTGACAAGAAAGAGGACTGGTGGACCGGGC
GGATCGGGAGTCGCGTTGGCATTTTCCCAAGGCGAATGTAGAAAGGCGGG
CAAAATCCTCGCCTCCTTTGTCGATCCACGACAAGCGTTTGGGCCCGATA
AAGTGATTCCTCCGGAGATTTTGGCAGGAGCCAAGATGCCTCTCGGAATT
CACAATCCGTTACCTTCATCGTTAGGAAATGCGGTCGGTACATTCCTCGG
GAGACTCTCCTGCACCAGATTGAACTCAACCGGGACCCGTCCTTCTGGGC
CATTGGACCTCGTGGAGCCAGCCCCTCAGCAACATTCCCGAAGTCATCGG
ATGAGGCCCGCTCGGCCAATAGAGGTCAGGAACACCAGGCACGAGACTCG
CGACGGGTCTCACGCGAGAAGGCAGAGAAGCAGTGCGATTGAGGTCTCGC
CGTTCTTACTGTCCTGAAAGCTGGATTTTTGGGCTCAGCTCGGTTCGGTT
CTGGTGTCGTCGTCGCTCGACTAGCTGATGGAACCTGGTCTGCTCCGTCG
GCCATTGCCACTGCTGGTGCTGGGTTCGGAGGTCAGATTGGGTTTGAGTT
AACCGACTTTGTGTTTATCTTGAACGATGCCGCAGCCGTCCGGACCTTCT
CGCAGGTCGGGACCCTGACGCTAGGTGGAAACGTTTCGATCGCTGCTGGA
CCGGTCGGACGAAACGCGGAAGCTGCTGGTGCGGCTAGCACAAAGGGTGT
GGCGGCAGTGTTCTCATACTCCAAGACCAAGGGTCTCTTTGCCGGTGTCA
GTCTGGAGGGAAGCATGCTGGTGGAACGTAAGGATGCGAACGAGAAGATG
TACAACAGCCGGGTTTCGGCACGCCAGCTCCTCAGCGGAACCATTCGACC
TCCCCCGGGCGCGGATCCTCTCCTGACCGTATTGAACTCGCGTGCGTTCT
ACGGCAATTCCCGGAATGGTAGTGATATGTACAACGACATCCCCGTTTAT
GATGACAGCCATGACGATGTGGTTTGGGAGGGCCGCAGGGGCGAGGCGTA
CGGCGAAGGAACGCGGCGCGACCGCACTGGGTTCAGTGGCTCAGGTTCAG
ATGACTTCCGGGACCGGCCCCGCCGTGCGAATACATGGGCAGACGATATA
TATGATCGACCTGCTGGAGGGTTGAGCCGTTCATCGACTACTCGGTACAG
CGGTCGCACCGACAATTACGACTCCTTCAACCGCAGCCGGAGCAATACCA
CCCCAATCGACGAGGACTATGTATATTCTGACCGCAAGCCTAGCCGACCC
ACAGCTCCAAAACCGGTGTTTGGACAGCGGACCGGGGCGGCTCCTGCTCT
ACGCCAGGACCAGGCCATAGCACTGTACACCTTTGATGCGGACCAGGAAG
GTGACTTGGGTTTCAAGAAAGGAGACATCATTACCATCCTCAAGAGGACT
GACAAGAAAGAGGACTGGTGGACCGGGCGGATCGGGAGTCGCGTTGGCAT
TTTCCCAAGGCGAATGTAGAAAGGCGGGCAAAATCCTCGCCTCCTTTGTC
GATCCACGACAAGCGTTTGGGCCCGATAAAGTGATTCCTCCGGAGATTTT
GGCAGGAGCCAAGATGCCTCTCGGAATTCACAATCCGTTACCTTCATCGT
TAGGAAATGCGGTCGGTACATTCCTCGGGAGACTCTCCTGCACCAGATTG
AACTCAACCGGGACCCGTCCTTCTGGGCCATTGGACCTCGTGGAGCCAGC
CCCTCAGCAACATTCCCGAAGTCATCGGATGAGGCCCGCTCGGCCAATAG
AGGTCAGGAACACCAGGCACGAGACTCGCGACGGGTCTCACGCGAGAAGG
CAGAGAAGCAGTGCGATTGAGGTCTCGCCGTTCTTACTGTCCTGAAAGCT
GGATTTTTGGGCTCAGCTCGGTTCGGTTCTGGTGTCGTCGTCGCTCGACT
AGCTGATGGAACCTGGTCTGCTCCGTCGGCCATTGCCACTGCTGGTGCTG
GGTTCGGAGGTCAGATTGGGTTTGAGTTAACCGACTTTGTGTTTATCTTG
AACGATGCCGCAGCCGTCCGGACCTTCTCGCAGGTCGGGACCCTGACGCT
AGGTGGAAACGTTTCGATCGCTGCTGGACCGGTCGGACGAAACGCGGAAG
CTGCTGGTGCGGCTAGCACAAAGGGTGTGGCGGCAGTGTTCTCATACTCC
AAGACCAAGGGTCTCTTTGCCGGTGTCAGTCTGGAGGGAAGCATGCTGGT
GGAACGTAAGGATGCGAACGAGAAGATGTACAACAGCCGGGTTTCGGCAC
GCCAGCTCCTCAGCGGAACCATTCGACCTCCCCCGGGCGCGGATCCTCTC
CTGACCGTATTGAACTCGCGTGCGTTCTACGGCAATTCCCGGAATGGTAG
TGATATGTACAACGACATCCCCGTTTATGATGACAGCCATGACGATGTGG
TTTGGGAGGGCCGCAGGGGCGAGGCGTACGGCGAAGGAACGCGGCGCGAC
CGCACTGGGTTCAGTGGCTCAGGTTCAGATGACTTCCGGGACCGGCCCCG
CCGTGCGAATACATGGGCAGACGATATATATGATCGACCTGCTGGAGGGT
TGAGCCGTTCATCGACTACTCGGTACAGCGGTCGCACCGACAATTACGAC
TCCTTCAACCGCAGCCGGAGCAATACCACCCCAATCGACGAGGACTATGT
ATATTCTGACCGCAAGCCTAGCCGACCCACAGCTCCAAAACCGGTGTTTG
GACAGCGGACCGGGGCGGCTCCTGCTCTACGCCAGGACCAGGCCATAGCA
CTGTACACCTTTGATGCGGACCAGGAAGGTGACTTGGGTTTCAAGAAAGG
AGACATCATTACCATCCTCAAGAGGACTGACAAGAAAGAGGACTGGTGGA
CCGGGCGGATCGGGAGTCGCGTTGGCATTTTCCCAAGGCGAATGTAGAAA
GGCGGGCAAAATCCTCGCCTCCTTTGTCGATCCACGACAAGCGTTTGGGC
CCGATAAAGTGATTCCTCCGGAGATTTTGGCAGGAGCCAAGATGCCTCTC
GGAATTCACAATCCGTTACCTTCATCGTTAGGAAATGCGGTCGGTACATT
CCTCGGGAGACTCTCCTGCACCAGATTGAACTCAACCGGGACCCGTCCTT
CTGGGCCATTGGACCTCGTGGAGCCAGCCCCTCAGCAACATTCCCGAAGT
CATCGGATGAGGCCCGCTCGGCCAATAGAGGTCAGGAACACCAGGCACGA
GACTCGCGACGGGTCTCACGCGAGAAGGCAGAGAAGCAGTGCGATTGAGG
TCTCGCCGTTCTTACTGTCCTGAAAGCTGGATTTTTGGGCTCAGCTCGGT
TCGGTTCTGGTGTCGTCGTCGCTCGACTAGCTGATGGAACCTGGTCTGCT
CCGTCGGCCATTGCCACTGCTGGTGCTGGGTTCGGAGGTCAGATTGGGTT
TGAGTTAACCGACTTTGTGTTTATCTTGAACGATGCCGCAGCCGTCCGGA
CCTTCTCGCAGGTCGGGACCCTGACGCTAGGTGGAAACGTTTCGATCGCT
GCTGGACCGGTCGGACGAAACGCGGAAGCTGCTGGTGCGGCTAGCACAAA
GGGTGTGGCGGCAGTGTTCTCATACTCCAAGACCAAGGGTCTCTTTGCCG
GTGTCAGTCTGGAGGGAAGCATGCTGGTGGAACGTAAGGATGCGAACGAG
AAGATGTACAACAGCCGGGTTTCGGCACGCCAGCTCCTCAGCGGAACCAT
TCGACCTCCCCCGGGCGCGGATCCTCTCCTGACCGTATTGAACTCGCGTG
CGTTCTACGGCAATTCCCGGAATGGTAGTGATATGTACAACGACATCCCC
GTTTATGATGACAGCCATGACGATGTGGTTTGGGAGGGCCGCAGGGGCGA
GGCGTACGGCGAAGGAACGCGGCGCGACCGCACTGGGTTCAGTGGCTCAG
GTTCAGATGACTTCCGGGACCGGCCCCGCCGTGCGAATACATGGGCAGAC
GATATATATGATCGACCTGCTGGAGGGTTGAGCCGTTCATCGACTACTCG
GTACAGCGGTCGCACCGACAATTACGACTCCTTCAACCGCAGCCGGAGCA
ATACCACCCCAATCGACGAGGACTATGTATATTCTGACCGCAAGCCTAGC
CGACCCACAGCTCCAAAACCGGTGTTTGGACAGCGGACCGGGGCGGCTCC
TGCTCTACGCCAGGACCAGGCCATAGCACTGTACACCTTTGATGCGGACC
AGGAAGGTGACTTGGGTTTCAAGAAAGGAGACATCATTACCATCCTCAAG
AGGACTGACAAGAAAGAGGACTGGTGGACCGGGCGGATCGGGAGTCGCGT
TGGCATTTTCCCAAGGCGAATGTAGAAAGGCGGGCAAAATCCTCGCCTCC
TTTGTCGATCCACGACAAGCGTTTGGGCCCGATAAAGTGATTCCTCCGGA
GATTTTGGCAGGAGCCAAGATGCCTCTCGGAATTCACAATCCGTTACCTT
CATCGTTAGGAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_001166ATCC10864_001166Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001166-T1ATCC10864_001166-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001166-T1.cdsATCC10864_001166-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001166-T1.exon4ATCC10864_001166-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_001166-T1.exon3ATCC10864_001166-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_001166-T1.exon2ATCC10864_001166-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_001166-T1.exon1ATCC10864_001166-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR007461
PFAMPF04366
PFAMPF07653
InterProIPR033643
InterProIPR036028
PFAMPF00018
PFAMPF14604
InterProIPR001452
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000019supercontigMCQH01000019:1080941..1083254 -
Powered by Drupal