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ATCC10864_001177-T1, ATCC10864_001177-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_001177-T1
Unique NameATCC10864_001177-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000019:1124014..1125730-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_001177-T1 ID=ATCC10864_001177-T1|Name=ATCC10864_001177-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1717bp|location=Sequence derived from alignment at MCQH01000019:1124014..1125730- (Aspergillus niger ATCC 10864)
ATGGGTGACAAGGATGACGGTCCGCTACAGGTTAGTCTGCCTAAAATTGT
GCGCGCCTTTCGCCAACACAAACGCAATGGCCGGTGCCAAACGGGATGTA
AACAGCTGATGCTGAGATCGAATCGCGTCGTAGGACCTGGAAAAGACATA
CTGCCCTCCTCTGGACCCTGCCTTGCTCACAGCCATCGCCTTCGACTATG
ACCTTACAGACTCTGCTCAACTTGGCCAACTGCGCGAGACTCTTGATGCA
CTTCGGCTGTCTGCATGGGAACAGGAGGATTTACCCTTCGACCCCTCCGG
CACGTCCGGTTTAGGTGCAGGACATGGCCTAGAAGCGGATGGGTCCTCTG
AGCTTAGTGAGTCCCAGGGAGACCGGTCGCGGGAGACAGATGTCACTAGC
CTCACGTCGGGCTTCTCTTCGGTCGGTATCAGGGACCATGTCTCGTATAC
TATTGGACCGGATGGGTCTCTCCATCTATCCGGAGCGAATGAAGAGGATA
AGATCGGCTATTTGACTGAGATGTTCCCGTCAGTTGACCGGTTTACAATC
CAGCACACATTGAAGAAGTCTAATGGGGACATTGATCGCTCGATGGACGT
CCTTCTCAACTTGTCGTTCTTTGATGAGCAAGTACCTGATGAGGATGGGG
TGGTCACTGTCCCTAAGGGGGTGGATGGCTTTGATGACCCGAGAGCAAGC
AAGAAGCAAGCTCGTAAGCGTAAACCCAAGAACAAGAATGGCCGAAGACA
AGAGGTCCTATCATCCATGAGCTCTGAGGCTAGTTTCGAGAACACAACGA
ACAAGTGGGATGCTGCTGGAAAGGACGTTGAGTTCATTCATGCGCGAACC
TCGGCGATACTGAAAAAGGAGACCGTCCGCTCAACTTATCACGCTAATGG
GGCCTCACTTCCTGCTACAATCAGGGCTCTTGCCGATACACACGCCCCTA
AGAAGCAGATCGATGAGGATCCGGTGACGGTTACGCAAGTGGCCGAGCTT
ACGCAAGAATTTCCGTCGGTGCCACCGCTCACATTTGCCGGCTTGCTTAA
AATCACGAGAAGTTCTGTATCAGCCGCCAGTGAGCTCGCGGCGGCTATGC
TGACAAGCCCCGTGGCTCCGTCCATAACTGAGATAATCAAGATCACCACA
GCACCCCCACCAGTGGACGTTGACGAGGAGATTCCGAAACGAGGCGCTGC
GCCGGTCACCCGAGACCTCAACCGAGCAAGAAGTGCAGCAGGCGTGCATT
TTGCAGCTGGTGCTGAGGCACTGTCAAAAGCATCGGTAGCATATCGGCGC
GGTAAATCAGATCGGTTGATGGGAGGTGCGGCTGCCTACTACTCCGCAGT
AGGACGAGACCACTTGGAACGAGCCAAACGCAATGCCGCTGCTGCCGCCG
ATGCCCTGGTAGACACACAGTCTACATGGAACTCGCTGGATCTGCATGGT
GTATCTGTACAGGATGCAGTGCGGATCGCTAGCGAGCGGGTGTCTGAATG
GTGGGACTCTCTAGGCGATGCCAAATATTCGCGTGGAAGTGGAGCTAGAG
ATCCTATTCAGGGTGGCTATCGCATTGTTACTGGGCTTGGACGGCATAGT
CATGATGGCACTTCACGCTTGGGCCCGGCTGTTGCAAAGATGCTGGCCCG
AGAAGGCTGGAGGGTAGAGATTGGTGCCGGAGTTTTGACCGTCGTTGGAG
TTGTCCGACGTCGCTGA
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Coding sequence (CDS) from alignment at MCQH01000019:1124014..1125730-

>ATCC10864_001177-T1 ID=ATCC10864_001177-T1|Name=ATCC10864_001177-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3228bp|location=Sequence derived from alignment at MCQH01000019:1124014..1125730- (Aspergillus niger ATCC 10864)
GACCTGGAAAAGACATACTGCCCTCCTCTGGACCCTGCCTTGCTCACAGC
CATCGCCTTCGACTATGACCTTACAGACTCTGCTCAACTTGGCCAACTGC
GCGAGACTCTTGATGCACTTCGGCTGTCTGCATGGGAACAGGAGGATTTA
CCCTTCGACCCCTCCGGCACGTCCGGTTTAGGTGCAGGACATGGCCTAGA
AGCGGATGGGTCCTCTGAGCTTAGTGAGTCCCAGGGAGACCGGTCGCGGG
AGACAGATGTCACTAGCCTCACGTCGGGCTTCTCTTCGGTCGGTATCAGG
GACCATGTCTCGTATACTATTGGACCGGATGGGTCTCTCCATCTATCCGG
AGCGAATGAAGAGGATAAGATCGGCTATTTGACTGAGATGTTCCCGTCAG
TTGACCGGTTTACAATCCAGCACACATTGAAGAAGTCTAATGGGGACATT
GATCGCTCGATGGACGTCCTTCTCAACTTGTCGTTCTTTGATGAGCAAGT
ACCTGATGAGGATGGGGTGGTCACTGTCCCTAAGGGGGTGGATGGCTTTG
ATGACCCGAGAGCAAGCAAGAAGCAAGCTCGTAAGCGTAAACCCAAGAAC
AAGAATGGCCGAAGACAAGAGGTCCTATCATCCATGAGCTCTGAGGCTAG
TTTCGAGAACACAACGAACAAGTGGGATGCTGCTGGAAAGGACGTTGAGT
TCATTCATGCGCGAACCTCGGCGATACTGAAAAAGGAGACCGTCCGCTCA
ACTTATCACGCTAATGGGGCCTCACTTCCTGCTACAATCAGGGCTCTTGC
CGATACACACGCCCCTAAGAAGCAGATCGATGAGGATCCGGTGACGGTTA
CGCAAGTGGCCGAGCTTACGCAAGAATTTCCGTCGGTGCCACCGCTCACA
TTTGCCGGCTTGCTTAAAATCACGAGAAGTTCTGTATCAGCCGCCAGTGA
GCTCGCGGCGGCTATGCTGACAAGCCCCGTGGCTCCGTCCATAACTGAGA
TAATCAAGATCACCACAGCACCCCCACCAGTGGACGTTGACGAGGAGATT
CCGAAACGAGGCGCTGCGCCGGTCACCCGAGACCTCAACCGAGCAAGAAG
TGCAGCAGGCGTGCATTTTGCAGCTGGTGCTGAGGCACTGTCAAAAGCAT
CGGTAGCATATCGGCGCGGTAAATCAGATCGGTTGATGGGAGGTGCGGCT
GCCTACTACTCCGCAGTAGGACGAGACCACTTGGAACGAGCCAAACGCAA
TGCCGCTGCTGCCGCCGATGCCCTGGTAGACACACAGTCTACATGGAACT
CGCTGGATCTGCATGGTGTATCTGTACAGGATGCAGTGCGGATCGCTAGC
GAGCGGGTGTCTGAATGGTGGGACTCTCTAGGCGATGCCAAATATTCGCG
TGGAAGTGGAGCTAGAGATCCTATTCAGGGTGGCTATCGCATTGTTACTG
GGCTTGGACGGCATAGTCATGATGGCACTTCACGCTTGGGCCCGGCTGTT
GCAAAGATGCTGGCCCGAGAAGGCTGGAGGGTAGAGATTGGTGCCGGAGT
TTTGACCGTCGTTGGAGTTGTCCGACGTCGCTGAATGGGTGACAAGGATG
ACGGTCCGCTACAGGACCTGGAAAAGACATACTGCCCTCCTCTGGACCCT
GCCTTGCTCACAGCCATCGCCTTCGACTATGACCTTACAGACTCTGCTCA
ACTTGGCCAACTGCGCGAGACTCTTGATGCACTTCGGCTGTCTGCATGGG
AACAGGAGGATTTACCCTTCGACCCCTCCGGCACGTCCGGTTTAGGTGCA
GGACATGGCCTAGAAGCGGATGGGTCCTCTGAGCTTAGTGAGTCCCAGGG
AGACCGGTCGCGGGAGACAGATGTCACTAGCCTCACGTCGGGCTTCTCTT
CGGTCGGTATCAGGGACCATGTCTCGTATACTATTGGACCGGATGGGTCT
CTCCATCTATCCGGAGCGAATGAAGAGGATAAGATCGGCTATTTGACTGA
GATGTTCCCGTCAGTTGACCGGTTTACAATCCAGCACACATTGAAGAAGT
CTAATGGGGACATTGATCGCTCGATGGACGTCCTTCTCAACTTGTCGTTC
TTTGATGAGCAAGTACCTGATGAGGATGGGGTGGTCACTGTCCCTAAGGG
GGTGGATGGCTTTGATGACCCGAGAGCAAGCAAGAAGCAAGCTCGTAAGC
GTAAACCCAAGAACAAGAATGGCCGAAGACAAGAGGTCCTATCATCCATG
AGCTCTGAGGCTAGTTTCGAGAACACAACGAACAAGTGGGATGCTGCTGG
AAAGGACGTTGAGTTCATTCATGCGCGAACCTCGGCGATACTGAAAAAGG
AGACCGTCCGCTCAACTTATCACGCTAATGGGGCCTCACTTCCTGCTACA
ATCAGGGCTCTTGCCGATACACACGCCCCTAAGAAGCAGATCGATGAGGA
TCCGGTGACGGTTACGCAAGTGGCCGAGCTTACGCAAGAATTTCCGTCGG
TGCCACCGCTCACATTTGCCGGCTTGCTTAAAATCACGAGAAGTTCTGTA
TCAGCCGCCAGTGAGCTCGCGGCGGCTATGCTGACAAGCCCCGTGGCTCC
GTCCATAACTGAGATAATCAAGATCACCACAGCACCCCCACCAGTGGACG
TTGACGAGGAGATTCCGAAACGAGGCGCTGCGCCGGTCACCCGAGACCTC
AACCGAGCAAGAAGTGCAGCAGGCGTGCATTTTGCAGCTGGTGCTGAGGC
ACTGTCAAAAGCATCGGTAGCATATCGGCGCGGTAAATCAGATCGGTTGA
TGGGAGGTGCGGCTGCCTACTACTCCGCAGTAGGACGAGACCACTTGGAA
CGAGCCAAACGCAATGCCGCTGCTGCCGCCGATGCCCTGGTAGACACACA
GTCTACATGGAACTCGCTGGATCTGCATGGTGTATCTGTACAGGATGCAG
TGCGGATCGCTAGCGAGCGGGTGTCTGAATGGTGGGACTCTCTAGGCGAT
GCCAAATATTCGCGTGGAAGTGGAGCTAGAGATCCTATTCAGGGTGGCTA
TCGCATTGTTACTGGGCTTGGACGGCATAGTCATGATGGCACTTCACGCT
TGGGCCCGGCTGTTGCAAAGATGCTGGCCCGAGAAGGCTGGAGGGTAGAG
ATTGGTGCCGGAGTTTTGACCGTCGTTGGAGTTGTCCGACGTCGCTGAAT
GGGTGACAAGGATGACGGTCCGCTACAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0043130ubiquitin binding
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_001177ATCC10864_001177Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001177-T1ATCC10864_001177-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001177-T1.cdsATCC10864_001177-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001177-T1.exon2ATCC10864_001177-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_001177-T1.exon1ATCC10864_001177-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR009060
PFAMPF08590
InterProIPR002625
PFAMPF02845
InterProIPR013899
InterProIPR003892
InterProIPR036063
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000019supercontigMCQH01000019:1124014..1125730 -
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