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ATCC10864_001250-T1, ATCC10864_001250-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_001250-T1
Unique NameATCC10864_001250-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000019:1355442..1356391-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_001250-T1 ID=ATCC10864_001250-T1|Name=ATCC10864_001250-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=950bp|location=Sequence derived from alignment at MCQH01000019:1355442..1356391- (Aspergillus niger ATCC 10864)
ATGGCGGGTATCTTTCGCACGATCTATGACTGGCTCCTGAGGATGTTCTG
GTAAGTGGGCCGCCGTCCCAATAAGTAATCGCTTTTTCTCCGGGAATGGT
TCCCCCCTCCTCGGCCCGTCCCCGCAGATAAGGAATCATTCGATTTGCTA
AGATGATATATTTCGCACCCGCAGGGCGACAGAGATGGATGTCACCATGA
TTGGTCTCCAGAATGCAGGAAAGTCTTCGTTGTTGCGCGTGCTTGCGGTA
TGTCTTTTCACCCCCACGGCAACTGAACATCTTCCCGTGTTATCGGTCCT
CGGCGCTAATCCCGCAGTATAGGGCGGCGAGTTCACTGTAGAGTAAGTCT
CCATCGTGTAGGGCCTGGCCTGACTGCGCGACACTGGGTTGTCTGGCTAA
ACCTTGTTTCAGTTCTATTCCCACGATCGGGTTCAACACGAAACGAGTCC
AAAAGGGCCATGTGACTCTCAAATGGTTGGTGACCCAGAGCTGAGCCTTG
AGACGCCTGTGCGCAATCAATGTATCTAATATCCATCCAGCTGGGATCTA
GGTGGACAGCCACGGTTTCGACCGATGTGGGAGCGATACTGTCGGGGAGT
AAATGCGATCGTGTAAGTGCCTCGACTTTGTCTGACACAGGTCTCGGTAT
CCTAGCAGCGCTAACAACCCGACCAGATACATTGTGGATGCAGCAGATCG
GGCTGCCTTACCCGTAGCCAAGGAGGAATTGCATGAGCTAATGGGCAAAG
AGACGCTCAATGGGATTCCGCTGTTGGTCCTCGGGAATAAGTCCGACCTT
CCGGAGAAGCTGTCGGTCGACGACCTGATCCACGAGATGGACCTGAAATC
CATCACTCATCGCGAAGTGAGCTGTTATGGGATCAGCGCTAAAGAGGAGA
CAAACCTCGATGCTGTTCTGCATTGGTTAATTGCTCGAGCCAGTCGATGA
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Coding sequence (CDS) from alignment at MCQH01000019:1355442..1356391-

>ATCC10864_001250-T1 ID=ATCC10864_001250-T1|Name=ATCC10864_001250-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3312bp|location=Sequence derived from alignment at MCQH01000019:1355442..1356391- (Aspergillus niger ATCC 10864)
ATACATTGTGGATGCAGCAGATCGGGCTGCCTTACCCGTAGCCAAGGAGG
AATTGCATGAGCTAATGGGCAAAGAGACGCTCAATGGGATTCCGCTGTTG
GTCCTCGGGAATAAGTCCGACCTTCCGGAGAAGCTGTCGGTCGACGACCT
GATCCACGAGATGGACCTGAAATCCATCACTCATCGCGAAGTGAGCTGTT
ATGGGATCAGCGCTAAAGAGGAGACAAACCTCGATGCTGTTCTGCATTGG
TTAATTGCTCGAGCCAGTCGATGACTGGGATCTAGGTGGACAGCCACGGT
TTCGACCGATGTGGGAGCGATACTGTCGGGGAGTAAATGCGATCGTTTCT
ATTCCCACGATCGGGTTCAACACGAAACGAGTCCAAAAGGGCCATGTGAC
TCTCAAATGGGCGGCGAGTTCACTGTAGAGGCGACAGAGATGGATGTCAC
CATGATTGGTCTCCAGAATGCAGGAAAGTCTTCGTTGTTGCGCGTGCTTG
CGATGGCGGGTATCTTTCGCACGATCTATGACTGGCTCCTGAGGATGTTC
TGATACATTGTGGATGCAGCAGATCGGGCTGCCTTACCCGTAGCCAAGGA
GGAATTGCATGAGCTAATGGGCAAAGAGACGCTCAATGGGATTCCGCTGT
TGGTCCTCGGGAATAAGTCCGACCTTCCGGAGAAGCTGTCGGTCGACGAC
CTGATCCACGAGATGGACCTGAAATCCATCACTCATCGCGAAGTGAGCTG
TTATGGGATCAGCGCTAAAGAGGAGACAAACCTCGATGCTGTTCTGCATT
GGTTAATTGCTCGAGCCAGTCGATGACTGGGATCTAGGTGGACAGCCACG
GTTTCGACCGATGTGGGAGCGATACTGTCGGGGAGTAAATGCGATCGTTT
CTATTCCCACGATCGGGTTCAACACGAAACGAGTCCAAAAGGGCCATGTG
ACTCTCAAATGGGCGGCGAGTTCACTGTAGAGGCGACAGAGATGGATGTC
ACCATGATTGGTCTCCAGAATGCAGGAAAGTCTTCGTTGTTGCGCGTGCT
TGCGATGGCGGGTATCTTTCGCACGATCTATGACTGGCTCCTGAGGATGT
TCTGATACATTGTGGATGCAGCAGATCGGGCTGCCTTACCCGTAGCCAAG
GAGGAATTGCATGAGCTAATGGGCAAAGAGACGCTCAATGGGATTCCGCT
GTTGGTCCTCGGGAATAAGTCCGACCTTCCGGAGAAGCTGTCGGTCGACG
ACCTGATCCACGAGATGGACCTGAAATCCATCACTCATCGCGAAGTGAGC
TGTTATGGGATCAGCGCTAAAGAGGAGACAAACCTCGATGCTGTTCTGCA
TTGGTTAATTGCTCGAGCCAGTCGATGACTGGGATCTAGGTGGACAGCCA
CGGTTTCGACCGATGTGGGAGCGATACTGTCGGGGAGTAAATGCGATCGT
TTCTATTCCCACGATCGGGTTCAACACGAAACGAGTCCAAAAGGGCCATG
TGACTCTCAAATGGGCGGCGAGTTCACTGTAGAGGCGACAGAGATGGATG
TCACCATGATTGGTCTCCAGAATGCAGGAAAGTCTTCGTTGTTGCGCGTG
CTTGCGATGGCGGGTATCTTTCGCACGATCTATGACTGGCTCCTGAGGAT
GTTCTGATACATTGTGGATGCAGCAGATCGGGCTGCCTTACCCGTAGCCA
AGGAGGAATTGCATGAGCTAATGGGCAAAGAGACGCTCAATGGGATTCCG
CTGTTGGTCCTCGGGAATAAGTCCGACCTTCCGGAGAAGCTGTCGGTCGA
CGACCTGATCCACGAGATGGACCTGAAATCCATCACTCATCGCGAAGTGA
GCTGTTATGGGATCAGCGCTAAAGAGGAGACAAACCTCGATGCTGTTCTG
CATTGGTTAATTGCTCGAGCCAGTCGATGACTGGGATCTAGGTGGACAGC
CACGGTTTCGACCGATGTGGGAGCGATACTGTCGGGGAGTAAATGCGATC
GTTTCTATTCCCACGATCGGGTTCAACACGAAACGAGTCCAAAAGGGCCA
TGTGACTCTCAAATGGGCGGCGAGTTCACTGTAGAGGCGACAGAGATGGA
TGTCACCATGATTGGTCTCCAGAATGCAGGAAAGTCTTCGTTGTTGCGCG
TGCTTGCGATGGCGGGTATCTTTCGCACGATCTATGACTGGCTCCTGAGG
ATGTTCTGATACATTGTGGATGCAGCAGATCGGGCTGCCTTACCCGTAGC
CAAGGAGGAATTGCATGAGCTAATGGGCAAAGAGACGCTCAATGGGATTC
CGCTGTTGGTCCTCGGGAATAAGTCCGACCTTCCGGAGAAGCTGTCGGTC
GACGACCTGATCCACGAGATGGACCTGAAATCCATCACTCATCGCGAAGT
GAGCTGTTATGGGATCAGCGCTAAAGAGGAGACAAACCTCGATGCTGTTC
TGCATTGGTTAATTGCTCGAGCCAGTCGATGACTGGGATCTAGGTGGACA
GCCACGGTTTCGACCGATGTGGGAGCGATACTGTCGGGGAGTAAATGCGA
TCGTTTCTATTCCCACGATCGGGTTCAACACGAAACGAGTCCAAAAGGGC
CATGTGACTCTCAAATGGGCGGCGAGTTCACTGTAGAGGCGACAGAGATG
GATGTCACCATGATTGGTCTCCAGAATGCAGGAAAGTCTTCGTTGTTGCG
CGTGCTTGCGATGGCGGGTATCTTTCGCACGATCTATGACTGGCTCCTGA
GGATGTTCTGATACATTGTGGATGCAGCAGATCGGGCTGCCTTACCCGTA
GCCAAGGAGGAATTGCATGAGCTAATGGGCAAAGAGACGCTCAATGGGAT
TCCGCTGTTGGTCCTCGGGAATAAGTCCGACCTTCCGGAGAAGCTGTCGG
TCGACGACCTGATCCACGAGATGGACCTGAAATCCATCACTCATCGCGAA
GTGAGCTGTTATGGGATCAGCGCTAAAGAGGAGACAAACCTCGATGCTGT
TCTGCATTGGTTAATTGCTCGAGCCAGTCGATGACTGGGATCTAGGTGGA
CAGCCACGGTTTCGACCGATGTGGGAGCGATACTGTCGGGGAGTAAATGC
GATCGTTTCTATTCCCACGATCGGGTTCAACACGAAACGAGTCCAAAAGG
GCCATGTGACTCTCAAATGGGCGGCGAGTTCACTGTAGAGGCGACAGAGA
TGGATGTCACCATGATTGGTCTCCAGAATGCAGGAAAGTCTTCGTTGTTG
CGCGTGCTTGCGATGGCGGGTATCTTTCGCACGATCTATGACTGGCTCCT
GAGGATGTTCTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0015031protein transport
Vocabulary: Molecular Function
TermDefinition
GO:0003924GTPase activity
GO:0005525GTP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_001250ATCC10864_001250Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001250-T1ATCC10864_001250-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001250-T1.cdsATCC10864_001250-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001250-T1.exon6ATCC10864_001250-T1.exon6Aspergillus niger ATCC 10864exon
ATCC10864_001250-T1.exon5ATCC10864_001250-T1.exon5Aspergillus niger ATCC 10864exon
ATCC10864_001250-T1.exon4ATCC10864_001250-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_001250-T1.exon3ATCC10864_001250-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_001250-T1.exon2ATCC10864_001250-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_001250-T1.exon1ATCC10864_001250-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF09439
InterProIPR027417
PFAMPF00025
PFAMPF00071
PFAMPF04670
PFAMPF08477
PFAMPF01926
InterProIPR005225
InterProIPR044154
InterProIPR006689
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000019supercontigMCQH01000019:1355442..1356391 -
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