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ATCC10864_001260-T1, ATCC10864_001260-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_001260-T1
Unique NameATCC10864_001260-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000019:1387517..1388950+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_001260-T1 ID=ATCC10864_001260-T1|Name=ATCC10864_001260-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1434bp|location=Sequence derived from alignment at MCQH01000019:1387517..1388950+ (Aspergillus niger ATCC 10864)
ATGTCCACCACCTCCGATCCCCCCTCCTCCTCCCCCTCCACCCCCACTCA
CATCCGCATCTTCACCTTAAACTGCTGGGGTCTCAAATACATCGCCAAAC
ACCGACACGCACGTCTTGCCGAGATTGGTCGCCAGCTCGCCATAGCCTCC
CCGCCGCCCGAAATCGTCGGTCTTCAAGAATGCTGGACGCAACAAGACTA
CGAATCCATCCGTCAGCAAACCCGTCACATCCTCCCCTACGGCAAGTTCT
ACTTCGGCGGTATCTGGGGCGCCGGTCTGGCCATTCTCTCCAAATGGCCC
ATCGAAGAAAGTAGCATGTTCGCATACCCGCTCAATGGGCGTCCCACGGC
CTTCTTCCGCGGCGACTGGTACGTCGGGAAGGGCGTGGCATGTGCGCGCG
TCCGTTTCGGACCTGGAGTCCAAGACGTCGCGGAGGTGTTCTGCACGCAT
CTTCACGCCCCCTACGAGCGAGAACCCAACGATTCATATATCTGTCATCG
AACGGCGCAGGCGTGGGAAATCGCGAAACTAATGCGCGGGGCCGCGGAGC
GCGGACATTTGGTTATCGGTCTGGGCGACTTCAACATGCTGCCATCGTCA
TTCGCCCATCAATTGATCCAGGCTCATAGCCCCGTCCGGGATGCATGGCA
GGTCCTGCATCCCGATTCGTCGGTCGGGGCGGCCATTGACCCCGTCGAGC
AGAAACGGGGTAAGCCCATACCTTCAGCGGAGTACAATATCACCGAGAAC
GGCGCCACCTGCGATGGGAAATTCAATACCTGGCGCTGGTCCAAAGAGGA
CCAGAAGCGCCTCGAGAAAGGCCAAGACATCGTGGTTGATAAAGATGCCC
CATGCCCCAAAGGCAAACGCCTCGATTACATCTTTGTTGGAGACGGCAAC
TACCCCCCATTATTCCCGGCACCGCGCTGGTCCGTCGAATCCACCCGACT
CTCAATGACAGAGCGCCACCCTACCCTTCGCTGCTCCCTGAGCGACCACT
TCGCCGTCGAGGCTGTAATCACTCGCGTTCCGTCAGAGAAAGTCGACAAC
GACACCACAATTAGCCACCAATCTTCAGTCCCCAACACTGCTCTCACGCC
CGATACCTACGACCGCATCATCGACATGATCCACACCTACGTGCGCCGCG
AACGGTCTCAGCGACGCTGGCGCGTAGCGCATTTCCTAGCCTCGGTGATT
ATATCCATCGGCTGCTTCATCGGAGTGTGGTGGACAGGCGACCATCTACC
CTATGTAGCGTTCATTTTGGTCCTCGTGAGCACGTTGAGCTTTGGAGCCG
GTATTCTGGATGGGTTGATTGGGGGGTTGTTTATGTCGAGTGAGTTGCGC
GCGTTGAAGGAGTTTGAGTGGGAGGTGAGGAATGCGAAGATGATTGCTGA
GGCGGTCGGGGGCAAGGGGGAGAAGGTGGAGTAG
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Coding sequence (CDS) from alignment at MCQH01000019:1387517..1388950+

>ATCC10864_001260-T1 ID=ATCC10864_001260-T1|Name=ATCC10864_001260-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1434bp|location=Sequence derived from alignment at MCQH01000019:1387517..1388950+ (Aspergillus niger ATCC 10864)
ATGTCCACCACCTCCGATCCCCCCTCCTCCTCCCCCTCCACCCCCACTCA
CATCCGCATCTTCACCTTAAACTGCTGGGGTCTCAAATACATCGCCAAAC
ACCGACACGCACGTCTTGCCGAGATTGGTCGCCAGCTCGCCATAGCCTCC
CCGCCGCCCGAAATCGTCGGTCTTCAAGAATGCTGGACGCAACAAGACTA
CGAATCCATCCGTCAGCAAACCCGTCACATCCTCCCCTACGGCAAGTTCT
ACTTCGGCGGTATCTGGGGCGCCGGTCTGGCCATTCTCTCCAAATGGCCC
ATCGAAGAAAGTAGCATGTTCGCATACCCGCTCAATGGGCGTCCCACGGC
CTTCTTCCGCGGCGACTGGTACGTCGGGAAGGGCGTGGCATGTGCGCGCG
TCCGTTTCGGACCTGGAGTCCAAGACGTCGCGGAGGTGTTCTGCACGCAT
CTTCACGCCCCCTACGAGCGAGAACCCAACGATTCATATATCTGTCATCG
AACGGCGCAGGCGTGGGAAATCGCGAAACTAATGCGCGGGGCCGCGGAGC
GCGGACATTTGGTTATCGGTCTGGGCGACTTCAACATGCTGCCATCGTCA
TTCGCCCATCAATTGATCCAGGCTCATAGCCCCGTCCGGGATGCATGGCA
GGTCCTGCATCCCGATTCGTCGGTCGGGGCGGCCATTGACCCCGTCGAGC
AGAAACGGGGTAAGCCCATACCTTCAGCGGAGTACAATATCACCGAGAAC
GGCGCCACCTGCGATGGGAAATTCAATACCTGGCGCTGGTCCAAAGAGGA
CCAGAAGCGCCTCGAGAAAGGCCAAGACATCGTGGTTGATAAAGATGCCC
CATGCCCCAAAGGCAAACGCCTCGATTACATCTTTGTTGGAGACGGCAAC
TACCCCCCATTATTCCCGGCACCGCGCTGGTCCGTCGAATCCACCCGACT
CTCAATGACAGAGCGCCACCCTACCCTTCGCTGCTCCCTGAGCGACCACT
TCGCCGTCGAGGCTGTAATCACTCGCGTTCCGTCAGAGAAAGTCGACAAC
GACACCACAATTAGCCACCAATCTTCAGTCCCCAACACTGCTCTCACGCC
CGATACCTACGACCGCATCATCGACATGATCCACACCTACGTGCGCCGCG
AACGGTCTCAGCGACGCTGGCGCGTAGCGCATTTCCTAGCCTCGGTGATT
ATATCCATCGGCTGCTTCATCGGAGTGTGGTGGACAGGCGACCATCTACC
CTATGTAGCGTTCATTTTGGTCCTCGTGAGCACGTTGAGCTTTGGAGCCG
GTATTCTGGATGGGTTGATTGGGGGGTTGTTTATGTCGAGTGAGTTGCGC
GCGTTGAAGGAGTTTGAGTGGGAGGTGAGGAATGCGAAGATGATTGCTGA
GGCGGTCGGGGGCAAGGGGGAGAAGGTGGAGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0004767sphingomyelin phosphodiesterase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_001260ATCC10864_001260Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001260-T1.exon1ATCC10864_001260-T1.exon1Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001260-T1.cdsATCC10864_001260-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001260-T1ATCC10864_001260-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF03372
InterProIPR005135
InterProIPR038772
InterProIPR036691
Properties
Property NameValue
NoteBUSCO:EOG09263A64
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000019supercontigMCQH01000019:1387517..1388950 +
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