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ATCC10864_001268-T1, ATCC10864_001268-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_001268-T1
Unique NameATCC10864_001268-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000019:1408993..1410167-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_001268-T1 ID=ATCC10864_001268-T1|Name=ATCC10864_001268-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1175bp|location=Sequence derived from alignment at MCQH01000019:1408993..1410167- (Aspergillus niger ATCC 10864)
ATGAGACTTCCGCTTGTTAGCTCGACAATCGCTCTCCTTTCCAGCGCCAG
CTTAGTTGCAGCGCAGACATACACCAATTGTAACCCATTGAAAAAATGTA
AGTGTCCAAATCGTGCGTGTGATGGGCATGCGCAGCTAATACTTCTAAAG
CATGCCCCGCGGATCCCGCACTTGGGAAATCAGCGAGCTATGACTTCACC
CAAGGTAGTTCTTCCGACTTTACTGCAACCGGTAGCCCGACCTATGGTAA
AGATGGTGCCGAATTCACCGTGGCTGAGCAGGGCGATGCGCCATTGATCC
AGTCCAACTGGTACATCATGTTTGGGCACGTGGAATACGTGATTAAGGCT
GCCCCCGGAACGGGTATTGTCAGCAGTGCCGTTCTGCAGTCAGATGATTT
GGATGAGATCGACTGGGAATGGCTTGGAGGGAACGATCAGCTTGTGCAAA
CGAACTATTTCGGCAAAGGAGATACCAGTAGTTACAATCGTGGAGCTACC
CATAATGATCCTGGGAACCATGACGACTTTCACACCTATACCGTGGACTG
GACGAGCAAGCAAATCGTCTGGCAAATCGATGGCACAACGGTCAGAGTGC
TTACGCCGGACACTGCTGATACGAATCAGTACCCCCAAACTCCCATGGTG
GTCAAAGTAGGAATCTGGGCTGGTGGCGATCCCAGTAACCCTCAGGGCAC
AATCGGTGAGTGTCTAGCCCCTTGTCACTGCAATATTCCCTTTCCCCTGG
TGTGCAATATGCTGATTTTTGTCTTAGATTGGGCTGGTGGCACGACCGAT
TACAGCGCCGGACCTTACACAATGTATTTGAAGTCTCTCAAAGTGACGGA
TTATTCGACCGGCTCGTCATACTCATATGGTGATGAGAGCGGGGACTGGA
CGTCAATTACTGCCAATGGGGGTCAGGTTAATGGGAACATTGGGGCCGAT
ACGATGACCTCAATTGAGTCAGCACCCACTGTGACGTCGACGGTTGCCAG
TATTCCTATCCCTTGGAGCGGCACTCATCGTGAAACATCCAGCTTTGTGA
CTCCAGATGTTTGGCCTTGGGTTGCGACAGCAACATCGACATCGCTGCCT
GCTGGCTGGACCTATTCTGGTTCTCGGCAAACCCAGCCGCCTAGTGCGGC
TTCTGTGAGTGAGCATTTCCCTTAA
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Coding sequence (CDS) from alignment at MCQH01000019:1408993..1410167-

>ATCC10864_001268-T1 ID=ATCC10864_001268-T1|Name=ATCC10864_001268-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3150bp|location=Sequence derived from alignment at MCQH01000019:1408993..1410167- (Aspergillus niger ATCC 10864)
ATTGGGCTGGTGGCACGACCGATTACAGCGCCGGACCTTACACAATGTAT
TTGAAGTCTCTCAAAGTGACGGATTATTCGACCGGCTCGTCATACTCATA
TGGTGATGAGAGCGGGGACTGGACGTCAATTACTGCCAATGGGGGTCAGG
TTAATGGGAACATTGGGGCCGATACGATGACCTCAATTGAGTCAGCACCC
ACTGTGACGTCGACGGTTGCCAGTATTCCTATCCCTTGGAGCGGCACTCA
TCGTGAAACATCCAGCTTTGTGACTCCAGATGTTTGGCCTTGGGTTGCGA
CAGCAACATCGACATCGCTGCCTGCTGGCTGGACCTATTCTGGTTCTCGG
CAAACCCAGCCGCCTAGTGCGGCTTCTGTGAGTGAGCATTTCCCTTAACA
TGCCCCGCGGATCCCGCACTTGGGAAATCAGCGAGCTATGACTTCACCCA
AGGTAGTTCTTCCGACTTTACTGCAACCGGTAGCCCGACCTATGGTAAAG
ATGGTGCCGAATTCACCGTGGCTGAGCAGGGCGATGCGCCATTGATCCAG
TCCAACTGGTACATCATGTTTGGGCACGTGGAATACGTGATTAAGGCTGC
CCCCGGAACGGGTATTGTCAGCAGTGCCGTTCTGCAGTCAGATGATTTGG
ATGAGATCGACTGGGAATGGCTTGGAGGGAACGATCAGCTTGTGCAAACG
AACTATTTCGGCAAAGGAGATACCAGTAGTTACAATCGTGGAGCTACCCA
TAATGATCCTGGGAACCATGACGACTTTCACACCTATACCGTGGACTGGA
CGAGCAAGCAAATCGTCTGGCAAATCGATGGCACAACGGTCAGAGTGCTT
ACGCCGGACACTGCTGATACGAATCAGTACCCCCAAACTCCCATGGTGGT
CAAAGTAGGAATCTGGGCTGGTGGCGATCCCAGTAACCCTCAGGGCACAA
TCGATGAGACTTCCGCTTGTTAGCTCGACAATCGCTCTCCTTTCCAGCGC
CAGCTTAGTTGCAGCGCAGACATACACCAATTGTAACCCATTGAAAAAAT
ATTGGGCTGGTGGCACGACCGATTACAGCGCCGGACCTTACACAATGTAT
TTGAAGTCTCTCAAAGTGACGGATTATTCGACCGGCTCGTCATACTCATA
TGGTGATGAGAGCGGGGACTGGACGTCAATTACTGCCAATGGGGGTCAGG
TTAATGGGAACATTGGGGCCGATACGATGACCTCAATTGAGTCAGCACCC
ACTGTGACGTCGACGGTTGCCAGTATTCCTATCCCTTGGAGCGGCACTCA
TCGTGAAACATCCAGCTTTGTGACTCCAGATGTTTGGCCTTGGGTTGCGA
CAGCAACATCGACATCGCTGCCTGCTGGCTGGACCTATTCTGGTTCTCGG
CAAACCCAGCCGCCTAGTGCGGCTTCTGTGAGTGAGCATTTCCCTTAACA
TGCCCCGCGGATCCCGCACTTGGGAAATCAGCGAGCTATGACTTCACCCA
AGGTAGTTCTTCCGACTTTACTGCAACCGGTAGCCCGACCTATGGTAAAG
ATGGTGCCGAATTCACCGTGGCTGAGCAGGGCGATGCGCCATTGATCCAG
TCCAACTGGTACATCATGTTTGGGCACGTGGAATACGTGATTAAGGCTGC
CCCCGGAACGGGTATTGTCAGCAGTGCCGTTCTGCAGTCAGATGATTTGG
ATGAGATCGACTGGGAATGGCTTGGAGGGAACGATCAGCTTGTGCAAACG
AACTATTTCGGCAAAGGAGATACCAGTAGTTACAATCGTGGAGCTACCCA
TAATGATCCTGGGAACCATGACGACTTTCACACCTATACCGTGGACTGGA
CGAGCAAGCAAATCGTCTGGCAAATCGATGGCACAACGGTCAGAGTGCTT
ACGCCGGACACTGCTGATACGAATCAGTACCCCCAAACTCCCATGGTGGT
CAAAGTAGGAATCTGGGCTGGTGGCGATCCCAGTAACCCTCAGGGCACAA
TCGATGAGACTTCCGCTTGTTAGCTCGACAATCGCTCTCCTTTCCAGCGC
CAGCTTAGTTGCAGCGCAGACATACACCAATTGTAACCCATTGAAAAAAT
ATTGGGCTGGTGGCACGACCGATTACAGCGCCGGACCTTACACAATGTAT
TTGAAGTCTCTCAAAGTGACGGATTATTCGACCGGCTCGTCATACTCATA
TGGTGATGAGAGCGGGGACTGGACGTCAATTACTGCCAATGGGGGTCAGG
TTAATGGGAACATTGGGGCCGATACGATGACCTCAATTGAGTCAGCACCC
ACTGTGACGTCGACGGTTGCCAGTATTCCTATCCCTTGGAGCGGCACTCA
TCGTGAAACATCCAGCTTTGTGACTCCAGATGTTTGGCCTTGGGTTGCGA
CAGCAACATCGACATCGCTGCCTGCTGGCTGGACCTATTCTGGTTCTCGG
CAAACCCAGCCGCCTAGTGCGGCTTCTGTGAGTGAGCATTTCCCTTAACA
TGCCCCGCGGATCCCGCACTTGGGAAATCAGCGAGCTATGACTTCACCCA
AGGTAGTTCTTCCGACTTTACTGCAACCGGTAGCCCGACCTATGGTAAAG
ATGGTGCCGAATTCACCGTGGCTGAGCAGGGCGATGCGCCATTGATCCAG
TCCAACTGGTACATCATGTTTGGGCACGTGGAATACGTGATTAAGGCTGC
CCCCGGAACGGGTATTGTCAGCAGTGCCGTTCTGCAGTCAGATGATTTGG
ATGAGATCGACTGGGAATGGCTTGGAGGGAACGATCAGCTTGTGCAAACG
AACTATTTCGGCAAAGGAGATACCAGTAGTTACAATCGTGGAGCTACCCA
TAATGATCCTGGGAACCATGACGACTTTCACACCTATACCGTGGACTGGA
CGAGCAAGCAAATCGTCTGGCAAATCGATGGCACAACGGTCAGAGTGCTT
ACGCCGGACACTGCTGATACGAATCAGTACCCCCAAACTCCCATGGTGGT
CAAAGTAGGAATCTGGGCTGGTGGCGATCCCAGTAACCCTCAGGGCACAA
TCGATGAGACTTCCGCTTGTTAGCTCGACAATCGCTCTCCTTTCCAGCGC
CAGCTTAGTTGCAGCGCAGACATACACCAATTGTAACCCATTGAAAAAAT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005618cell wall
Vocabulary: Biological Process
TermDefinition
GO:0071555cell wall organization
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0016798hydrolase activity, acting on glycosyl bonds
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_001268ATCC10864_001268Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001268-T1ATCC10864_001268-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001268-T1.cdsATCC10864_001268-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001268-T1.exon3ATCC10864_001268-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_001268-T1.exon2ATCC10864_001268-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_001268-T1.exon1ATCC10864_001268-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF00722
InterProIPR017168
InterProIPR000757
InterProIPR013320
Properties
Property NameValue
NoteSECRETED:SignalP(1-21)
NoteCAZy:GH16
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000019supercontigMCQH01000019:1408993..1410167 -
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