You are here

Home

ATCC10864_001290-T1, ATCC10864_001290-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_001290-T1
Unique NameATCC10864_001290-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000019:1472672..1474453+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_001290-T1 ID=ATCC10864_001290-T1|Name=ATCC10864_001290-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1782bp|location=Sequence derived from alignment at MCQH01000019:1472672..1474453+ (Aspergillus niger ATCC 10864)
ATGTTGCGCCCAGCATGGAATCAGGCTTGGACAAGTCTGCTTCTAGGGTT
TTCCGCTACAGTGTCAGCGCTGGATCTGGAAATTAACAGCACGCGTAAGG
CCCCCCTCGACTGGATCACCGTGAATGGGATCGATGAGCTGACCAACCCT
CTTTTGCACGACATTCAGAATCGATCAAAGATGCCGCAACAGTGACAGTT
CACAATACGCTTACCAACTCGACTCTCAGCGGCAATGTCAATCCGGTGTA
CGGTGATGCTAATGAGTGGATATTTAACTCATCCACCGTGGAGGCGTGGC
TCTACTCGACTCTGATTCCGTTTTGGAATCTTACTGGAAACGACACCTAC
AATGAACTCATCAGCAAGCGCATGTATAGTATGGCAGGACTGGAGCTCGG
AGATTCGTGGGCAGAATCTGACAACGATACCAACATGAACCATGCGGCTT
GGGCGCTGGGTGCTGTAACGGCGGCTGAGATGGACTTCCCGGCCGATTCC
TCCAAGGAGTCTTGGCTGTTTTATGCAGGTCAGGCTCAGGGGACCTTGAG
TAGTACCTTCGCATTTTCGAATATATGCGACGGTGGTCTTGAAATTTCCA
ACGTTGATATAGAAGAGACGAACAAGTCGATGAAAGACGCCCTAAGCAAC
GGAGAGTTCCTGCAGTTGTCTGCACGACTAGCATATCTCACCACGGGTGA
TAATCAATCATCTTATGTAGCTGATGCAGTTAAGGTTTGGGACTGGTGCG
TGGATAACGATATGGTGGTGGAGTCAAATTGGACCATCAATTACCTGGTG
ACGAATACGACCGCCTCAGGGAACTGCACGGCGATGGCAACGAATAACGG
GGAATACACATATATCTATGGCCTGTACATGAGCGCGGCAGCATACATGT
ATAATGTGGTAGGTTTGGAGAGGCTTCCCCATCATGTGTGAGAAAAGTTT
GGCTAATTCTGGGTGCTCAAATCAGACCGGCGCAGCTGCTTGGGAGAAAA
GAACAAAAGGGATGTTAAATACCATCATGAACATGTTTGTTGATGATGGT
GTGATACAAGAACTTGGGATGGAGATCAGCCCTGACGCAGGATTCTCGGG
TTCGACTTGGGACGATGATACTGCGTACGCCTTGAAGGGCCTCTTGGCAT
CCTGCCTTGCGGTGGTGACACACCTCATGCCAGAAACCGTGGACACGATT
GAGCCTCTCCTCCGGAACACTGCAAAGGCCGTTGCGAAGCAATGCAGCGG
CATGAGCAACGGCACTGTCTGTGGTTCGGATTGGACTAAATCGACATACG
ATAAGGATCCCAACTTCTTCAGTTCGATGAGCGCTGTGAATGCTTTCACA
GCAAACTTGTTAATGGCGCGAAACTCCAGTAGCTCAAGCACCACGGGAAC
AAGCACCAACGGAACAAGCACGGACGCCGGAAGTGGTGGAAGCTCAGGTG
GGCTCTCTGGCGGGGACATTGCTGGCATTGTGGTCGGATCCGTTGCTGGC
GCTGCTATGATCGCTGCTGTAGCCTTTCTAATCCTCCGCAAGAAGAGGAA
GCAAGCTGAAAGTGGAGCAGGAGTAACACCAGAAAAGAATATGACCACTG
ACTCCAAAGGCGGTTACCAGGCCGCGGAACTCGAGCCACGAGAGGTTGCG
GAGCTTCCACAGGGCGCTGCCTCCTACAACTTCCCGGAGATGGACACTGA
CACTGCGATGGAACAACCGCCCCAGGAGCTGCCGCCCCAGGAGCTGAAAT
CAACGAAGACGATCCGTTATGAATTGGCCTAG
back to top

Coding sequence (CDS) from alignment at MCQH01000019:1472672..1474453+

>ATCC10864_001290-T1 ID=ATCC10864_001290-T1|Name=ATCC10864_001290-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=4923bp|location=Sequence derived from alignment at MCQH01000019:1472672..1474453+ (Aspergillus niger ATCC 10864)
ATGTTGCGCCCAGCATGGAATCAGGCTTGGACAAGTCTGCTTCTAGGGTT
TTCCGCTACAGTGTCAGCGCTGGATCTGGAAATTAACAGCACGCAATCGA
TCAAAGATGCCGCAACAGTGACAGTTCACAATACGCTTACCAACTCGACT
CTCAGCGGCAATGTCAATCCGGTGTACGGTGATGCTAATGAGTGGATATT
TAACTCATCCACCGTGGAGGCGTGGCTCTACTCGACTCTGATTCCGTTTT
GGAATCTTACTGGAAACGACACCTACAATGAACTCATCAGCAAGCGCATG
TATAGTATGGCAGGACTGGAGCTCGGAGATTCGTGGGCAGAATCTGACAA
CGATACCAACATGAACCATGCGGCTTGGGCGCTGGGTGCTGTAACGGCGG
CTGAGATGGACTTCCCGGCCGATTCCTCCAAGGAGTCTTGGCTGTTTTAT
GCAGGTCAGGCTCAGGGGACCTTGAGTAGTACCTTCGCATTTTCGAATAT
ATGCGACGGTGGTCTTGAAATTTCCAACGTTGATATAGAAGAGACGAACA
AGTCGATGAAAGACGCCCTAAGCAACGGAGAGTTCCTGCAGTTGTCTGCA
CGACTAGCATATCTCACCACGGGTGATAATCAATCATCTTATGTAGCTGA
TGCAGTTAAGGTTTGGGACTGGTGCGTGGATAACGATATGGTGGTGGAGT
CAAATTGGACCATCAATTACCTGGTGACGAATACGACCGCCTCAGGGAAC
TGCACGGCGATGGCAACGAATAACGGGGAATACACATATATCTATGGCCT
GTACATGAGCGCGGCAGCATACATGTATAATGTGACCGGCGCAGCTGCTT
GGGAGAAAAGAACAAAAGGGATGTTAAATACCATCATGAACATGTTTGTT
GATGATGGTGTGATACAAGAACTTGGGATGGAGATCAGCCCTGACGCAGG
ATTCTCGGGTTCGACTTGGGACGATGATACTGCGTACGCCTTGAAGGGCC
TCTTGGCATCCTGCCTTGCGGTGGTGACACACCTCATGCCAGAAACCGTG
GACACGATTGAGCCTCTCCTCCGGAACACTGCAAAGGCCGTTGCGAAGCA
ATGCAGCGGCATGAGCAACGGCACTGTCTGTGGTTCGGATTGGACTAAAT
CGACATACGATAAGGATCCCAACTTCTTCAGTTCGATGAGCGCTGTGAAT
GCTTTCACAGCAAACTTGTTAATGGCGCGAAACTCCAGTAGCTCAAGCAC
CACGGGAACAAGCACCAACGGAACAAGCACGGACGCCGGAAGTGGTGGAA
GCTCAGGTGGGCTCTCTGGCGGGGACATTGCTGGCATTGTGGTCGGATCC
GTTGCTGGCGCTGCTATGATCGCTGCTGTAGCCTTTCTAATCCTCCGCAA
GAAGAGGAAGCAAGCTGAAAGTGGAGCAGGAGTAACACCAGAAAAGAATA
TGACCACTGACTCCAAAGGCGGTTACCAGGCCGCGGAACTCGAGCCACGA
GAGGTTGCGGAGCTTCCACAGGGCGCTGCCTCCTACAACTTCCCGGAGAT
GGACACTGACACTGCGATGGAACAACCGCCCCAGGAGCTGCCGCCCCAGG
AGCTGAAATCAACGAAGACGATCCGTTATGAATTGGCCTAGATGTTGCGC
CCAGCATGGAATCAGGCTTGGACAAGTCTGCTTCTAGGGTTTTCCGCTAC
AGTGTCAGCGCTGGATCTGGAAATTAACAGCACGCAATCGATCAAAGATG
CCGCAACAGTGACAGTTCACAATACGCTTACCAACTCGACTCTCAGCGGC
AATGTCAATCCGGTGTACGGTGATGCTAATGAGTGGATATTTAACTCATC
CACCGTGGAGGCGTGGCTCTACTCGACTCTGATTCCGTTTTGGAATCTTA
CTGGAAACGACACCTACAATGAACTCATCAGCAAGCGCATGTATAGTATG
GCAGGACTGGAGCTCGGAGATTCGTGGGCAGAATCTGACAACGATACCAA
CATGAACCATGCGGCTTGGGCGCTGGGTGCTGTAACGGCGGCTGAGATGG
ACTTCCCGGCCGATTCCTCCAAGGAGTCTTGGCTGTTTTATGCAGGTCAG
GCTCAGGGGACCTTGAGTAGTACCTTCGCATTTTCGAATATATGCGACGG
TGGTCTTGAAATTTCCAACGTTGATATAGAAGAGACGAACAAGTCGATGA
AAGACGCCCTAAGCAACGGAGAGTTCCTGCAGTTGTCTGCACGACTAGCA
TATCTCACCACGGGTGATAATCAATCATCTTATGTAGCTGATGCAGTTAA
GGTTTGGGACTGGTGCGTGGATAACGATATGGTGGTGGAGTCAAATTGGA
CCATCAATTACCTGGTGACGAATACGACCGCCTCAGGGAACTGCACGGCG
ATGGCAACGAATAACGGGGAATACACATATATCTATGGCCTGTACATGAG
CGCGGCAGCATACATGTATAATGTGACCGGCGCAGCTGCTTGGGAGAAAA
GAACAAAAGGGATGTTAAATACCATCATGAACATGTTTGTTGATGATGGT
GTGATACAAGAACTTGGGATGGAGATCAGCCCTGACGCAGGATTCTCGGG
TTCGACTTGGGACGATGATACTGCGTACGCCTTGAAGGGCCTCTTGGCAT
CCTGCCTTGCGGTGGTGACACACCTCATGCCAGAAACCGTGGACACGATT
GAGCCTCTCCTCCGGAACACTGCAAAGGCCGTTGCGAAGCAATGCAGCGG
CATGAGCAACGGCACTGTCTGTGGTTCGGATTGGACTAAATCGACATACG
ATAAGGATCCCAACTTCTTCAGTTCGATGAGCGCTGTGAATGCTTTCACA
GCAAACTTGTTAATGGCGCGAAACTCCAGTAGCTCAAGCACCACGGGAAC
AAGCACCAACGGAACAAGCACGGACGCCGGAAGTGGTGGAAGCTCAGGTG
GGCTCTCTGGCGGGGACATTGCTGGCATTGTGGTCGGATCCGTTGCTGGC
GCTGCTATGATCGCTGCTGTAGCCTTTCTAATCCTCCGCAAGAAGAGGAA
GCAAGCTGAAAGTGGAGCAGGAGTAACACCAGAAAAGAATATGACCACTG
ACTCCAAAGGCGGTTACCAGGCCGCGGAACTCGAGCCACGAGAGGTTGCG
GAGCTTCCACAGGGCGCTGCCTCCTACAACTTCCCGGAGATGGACACTGA
CACTGCGATGGAACAACCGCCCCAGGAGCTGCCGCCCCAGGAGCTGAAAT
CAACGAAGACGATCCGTTATGAATTGGCCTAGATGTTGCGCCCAGCATGG
AATCAGGCTTGGACAAGTCTGCTTCTAGGGTTTTCCGCTACAGTGTCAGC
GCTGGATCTGGAAATTAACAGCACGCAATCGATCAAAGATGCCGCAACAG
TGACAGTTCACAATACGCTTACCAACTCGACTCTCAGCGGCAATGTCAAT
CCGGTGTACGGTGATGCTAATGAGTGGATATTTAACTCATCCACCGTGGA
GGCGTGGCTCTACTCGACTCTGATTCCGTTTTGGAATCTTACTGGAAACG
ACACCTACAATGAACTCATCAGCAAGCGCATGTATAGTATGGCAGGACTG
GAGCTCGGAGATTCGTGGGCAGAATCTGACAACGATACCAACATGAACCA
TGCGGCTTGGGCGCTGGGTGCTGTAACGGCGGCTGAGATGGACTTCCCGG
CCGATTCCTCCAAGGAGTCTTGGCTGTTTTATGCAGGTCAGGCTCAGGGG
ACCTTGAGTAGTACCTTCGCATTTTCGAATATATGCGACGGTGGTCTTGA
AATTTCCAACGTTGATATAGAAGAGACGAACAAGTCGATGAAAGACGCCC
TAAGCAACGGAGAGTTCCTGCAGTTGTCTGCACGACTAGCATATCTCACC
ACGGGTGATAATCAATCATCTTATGTAGCTGATGCAGTTAAGGTTTGGGA
CTGGTGCGTGGATAACGATATGGTGGTGGAGTCAAATTGGACCATCAATT
ACCTGGTGACGAATACGACCGCCTCAGGGAACTGCACGGCGATGGCAACG
AATAACGGGGAATACACATATATCTATGGCCTGTACATGAGCGCGGCAGC
ATACATGTATAATGTGACCGGCGCAGCTGCTTGGGAGAAAAGAACAAAAG
GGATGTTAAATACCATCATGAACATGTTTGTTGATGATGGTGTGATACAA
GAACTTGGGATGGAGATCAGCCCTGACGCAGGATTCTCGGGTTCGACTTG
GGACGATGATACTGCGTACGCCTTGAAGGGCCTCTTGGCATCCTGCCTTG
CGGTGGTGACACACCTCATGCCAGAAACCGTGGACACGATTGAGCCTCTC
CTCCGGAACACTGCAAAGGCCGTTGCGAAGCAATGCAGCGGCATGAGCAA
CGGCACTGTCTGTGGTTCGGATTGGACTAAATCGACATACGATAAGGATC
CCAACTTCTTCAGTTCGATGAGCGCTGTGAATGCTTTCACAGCAAACTTG
TTAATGGCGCGAAACTCCAGTAGCTCAAGCACCACGGGAACAAGCACCAA
CGGAACAAGCACGGACGCCGGAAGTGGTGGAAGCTCAGGTGGGCTCTCTG
GCGGGGACATTGCTGGCATTGTGGTCGGATCCGTTGCTGGCGCTGCTATG
ATCGCTGCTGTAGCCTTTCTAATCCTCCGCAAGAAGAGGAAGCAAGCTGA
AAGTGGAGCAGGAGTAACACCAGAAAAGAATATGACCACTGACTCCAAAG
GCGGTTACCAGGCCGCGGAACTCGAGCCACGAGAGGTTGCGGAGCTTCCA
CAGGGCGCTGCCTCCTACAACTTCCCGGAGATGGACACTGACACTGCGAT
GGAACAACCGCCCCAGGAGCTGCCGCCCCAGGAGCTGAAATCAACGAAGA
CGATCCGTTATGAATTGGCCTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0016052carbohydrate catabolic process
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0008496mannan endo-1,6-alpha-mannosidase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_001290ATCC10864_001290Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001290-T1.exon1ATCC10864_001290-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_001290-T1.exon2ATCC10864_001290-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_001290-T1.exon3ATCC10864_001290-T1.exon3Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001290-T1.cdsATCC10864_001290-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001290-T1ATCC10864_001290-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF03663
InterProIPR008928
InterProIPR014480
InterProIPR005198
Properties
Property NameValue
NoteCAZy:GH76
NoteSECRETED:SignalP(1-23)
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000019supercontigMCQH01000019:1472672..1474453 +
Powered by Drupal