You are here

Home

ATCC10864_001302-T1, ATCC10864_001302-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_001302-T1
Unique NameATCC10864_001302-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000021:26777..28172+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_001302-T1 ID=ATCC10864_001302-T1|Name=ATCC10864_001302-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1396bp|location=Sequence derived from alignment at MCQH01000021:26777..28172+ (Aspergillus niger ATCC 10864)
ATGGTGCTTGTTCATCCAGCAAAGGTCACTCACAGTACTGCATGTAATCT
TTTCGGAATTTCGCGCTGCCAAAGCCGAAAGCCGGGTCCCACTCTTAGTA
TTCGGTATTCGTGCCAAGCGACCATCTCAGGAAAAAGCGGAAGATGCATC
GTCTCAGCTGAGAACCTTCTCCGGTCGCCTACGGTGGTAGTGATTACGTC
TGATGTGGAAGACTCATATAATAACTGGTGGGCCCAGAGAAACATAACGT
CTTACCCCAGTAAACTCGAACACAACTCGGCGCTGATGGTACCAATGGCA
GAAATCACTCCCACATCTACCCAGAAACTGTCACACTGGAGGCTAGTGTG
TGATCAGGCCGGTATCACTGCCCAGGTTCGAGACTGGGCATATGCTGGCT
CTGGCACAGAAACTGATCCGTTCATTGTCGAATGGCTGCCCGGTGACCCC
CGCAACCCGAAGCTGTTCTCACCATATAAAAAGTGGGGGATCACAGTCCT
TGTGTCGTTGCAGACGTTTTCGGTTTCATTTACCTCCTCTGCCCTGTCCG
GGGCCACGGAAAACTTGAAGGCGGACCTCCATATCAGCTCTGAATTAGCG
GCGCTCAGTCTCTCCCTGTTTGTCCTGGGCTTTGCTGTCGGCCCCATGTT
GTGGGCTCCCTTGGGCGAACTCTACGGAAGGCAGAAACTGGCCTTTCTGT
CTCTTGGGGCCTTGACTATCTTCAATGTTGGGTGTACCGTTTCACCTAAC
ATTACCTCCCTAATTATTCTCCGCTTCCTGGCTGGTGCTTGCGGGGCATC
CTCTTTGACAAACTCCGGTGGTGTCATTGCGGACATGTTTTTGGCGTCAG
AGCGGGGGCTCGCTATGGCTCTCTTCACGTCTGCACCATTCATGGGCCCA
GCCTTGGGGCCCATTTGCGGTGGTTTTCTTGGGATGAAGAGGGGCTGGCG
ATGGGTAGAAGGAATGACATGTGTGCTCTCTGGAGTAATTTGGGCTTTTG
CTGGACTTCTAGTCCCCGAAACATATGCTCCGCTGATTTTCCGGACTCGA
GCACATCGGCTCTCAAAGAGCAACGGGGGGATATATATTAGCAAACTCGA
GGTCGAAAAGACCGAAAGACCTTCCGCCGCAGAGGCATTCCGGGCTGTCC
TTGTCCGTCCATGGGCCCTCCTGACCCGTGAGCCCATTGTCCTCTTTCTT
TCGCTTTACATGGCTATCATATACGGCACTTTATATATGCTCTTTCCTGC
GTTCCCGATTGTTTTCCAGCAGGGAAGAGGATGGAACGAGGGAACCGGAA
ATTTGTCCTTTCTAGGGGTCATCATTGGGGTGCTCTGTGCCACGGGCTAC
TCGATTTTCGACAATAGGCGCTATATCCGAGCCACGGAACAGTTAG
back to top

Coding sequence (CDS) from alignment at MCQH01000021:26777..28172+

>ATCC10864_001302-T1 ID=ATCC10864_001302-T1|Name=ATCC10864_001302-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2412bp|location=Sequence derived from alignment at MCQH01000021:26777..28172+ (Aspergillus niger ATCC 10864)
ATGGTGCTTGTTCATCCAGCAAAGGTCACTCACAGTACTGCATGTAATCT
TTTCGGAATTTCGCGCTGCCAAAGCCGAAAGCCGGGTCCCACTCTTAGTA
TTCGGTATTCGTGCCAAGCGACCATCTCAGGAAAAAGCGGAAGATGCATC
GTCTCAGCTGAGAACCTTCTCCGGTCGCCTACGGTGGTAGTGATTACGTC
TGATGTGGAAGACTCATATAATAACTGGTGGGCCCAGAGAAACATAACGT
CTTACCCCAGTAAACTCGAACACAACTCGGCGCTGATGGTACCAATGGCA
GAAATCACTCCCACATCTACCCAGAAACTGTCACACTGGAGGCTAGTGTG
TGATCAGGCCGGTATCACTGCCCAGGTTCGAGACTGGGCATATGCTGGCT
CTGGCACAGAAACTGATCCGTTCATTGTCGAATGGCTGCCCGGTGACCCC
CGCAACCCGAAGCTGTTCTCACCATATAAAAAGTGGGGGATCACAGTCCT
TGTGTCGTTGCAGACGTTTTCGGTTTCATTTACCTCCTCTGCCCTGTCCG
GGGCCACGGAAAACTTGAAGGCGGACCTCCATATCAGCTCTGAATTAGCG
GCGCTCAGTCTCTCCCTGTTTGTCCTGGGCTTTGCTGTCGGCCCCATGTT
GTGGGCTCCCTTGGGCGAACTCTACGGAAGGCAGAAACTGGCCTTTCTGT
CTCTTGGGGCCTTGACTATCTTCAATGTTGGGTGTACCGTTTCACCTAAC
ATTACCTCCCTAATTATTCTCCGCTTCCTGGCTGGTGCTTGCGGGGCATC
CTCTTTGACAAACTCCGGTGGTGTCATTGCGGACATGTTTTTGGCGTCAG
AGCGGGGGCTCGCTATGGCTCTCTTCACGTCTGCACCATTCATGGGCCCA
GCCTTGGGGCCCATTTGCGGTGGTTTTCTTGGGATGAAGAGGGGCTGGCG
ATGGGTAGAAGGAATGACATGTGTGCTCTCTGGAGTAATTTGGGCTTTTG
CTGGACTTCTAGTCCCCGAAACATATGCTCCGCTGATTTTCCGGACTCGA
GCACATCGGCTCTCAAAGAGCAACGGGGGGATATATATTAGCAAACTCGA
GGTCGAAAAGACCGAAAGACCTTCCGCCGCAGAGGCATTCCGGGCTGTCC
TTGTCCGTCCATGGGCCCTCCTGACCCGCGCTATATCCGAGCCACGGAAC
AGTTAGATGGTGCTTGTTCATCCAGCAAAGGTCACTCACAGTACTGCATG
TAATCTTTTCGGAATTTCGCGCTGCCAAAGCCGAAAGCCGGGTCCCACTC
TTAGTATTCGGTATTCGTGCCAAGCGACCATCTCAGGAAAAAGCGGAAGA
TGCATCGTCTCAGCTGAGAACCTTCTCCGGTCGCCTACGGTGGTAGTGAT
TACGTCTGATGTGGAAGACTCATATAATAACTGGTGGGCCCAGAGAAACA
TAACGTCTTACCCCAGTAAACTCGAACACAACTCGGCGCTGATGGTACCA
ATGGCAGAAATCACTCCCACATCTACCCAGAAACTGTCACACTGGAGGCT
AGTGTGTGATCAGGCCGGTATCACTGCCCAGGTTCGAGACTGGGCATATG
CTGGCTCTGGCACAGAAACTGATCCGTTCATTGTCGAATGGCTGCCCGGT
GACCCCCGCAACCCGAAGCTGTTCTCACCATATAAAAAGTGGGGGATCAC
AGTCCTTGTGTCGTTGCAGACGTTTTCGGTTTCATTTACCTCCTCTGCCC
TGTCCGGGGCCACGGAAAACTTGAAGGCGGACCTCCATATCAGCTCTGAA
TTAGCGGCGCTCAGTCTCTCCCTGTTTGTCCTGGGCTTTGCTGTCGGCCC
CATGTTGTGGGCTCCCTTGGGCGAACTCTACGGAAGGCAGAAACTGGCCT
TTCTGTCTCTTGGGGCCTTGACTATCTTCAATGTTGGGTGTACCGTTTCA
CCTAACATTACCTCCCTAATTATTCTCCGCTTCCTGGCTGGTGCTTGCGG
GGCATCCTCTTTGACAAACTCCGGTGGTGTCATTGCGGACATGTTTTTGG
CGTCAGAGCGGGGGCTCGCTATGGCTCTCTTCACGTCTGCACCATTCATG
GGCCCAGCCTTGGGGCCCATTTGCGGTGGTTTTCTTGGGATGAAGAGGGG
CTGGCGATGGGTAGAAGGAATGACATGTGTGCTCTCTGGAGTAATTTGGG
CTTTTGCTGGACTTCTAGTCCCCGAAACATATGCTCCGCTGATTTTCCGG
ACTCGAGCACATCGGCTCTCAAAGAGCAACGGGGGGATATATATTAGCAA
ACTCGAGGTCGAAAAGACCGAAAGACCTTCCGCCGCAGAGGCATTCCGGG
CTGTCCTTGTCCGTCCATGGGCCCTCCTGACCCGCGCTATATCCGAGCCA
CGGAACAGTTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_001302ATCC10864_001302Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001302-T1.exon1ATCC10864_001302-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_001302-T1.exon2ATCC10864_001302-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001302-T1.cdsATCC10864_001302-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001302-T1ATCC10864_001302-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR036259
InterProIPR011701
PFAMPF07690
InterProIPR020846
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000021supercontigMCQH01000021:26777..28172 +
Powered by Drupal