You are here

Home

ATCC10864_001320-T1, ATCC10864_001320-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_001320-T1
Unique NameATCC10864_001320-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000027:9793..11447-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_001320-T1 ID=ATCC10864_001320-T1|Name=ATCC10864_001320-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1655bp|location=Sequence derived from alignment at MCQH01000027:9793..11447- (Aspergillus niger ATCC 10864)
ATGCTTGATACCGGTAGCACTAGTGCGGTCGGGTCCACCGCCATCTCCAT
GAGGGACCGACTGCTTCAGAGTATGCCAGGGCCTCAACAGGTCTTAAAAG
CTATAACTGGATCATTGGGTGTCTCGTCGCTTTCGGTTTCAGATTATAGT
TCGTCCGAAGCAACCTTCCGGCAATGTCCTTCCTCCGAAGTGAGCTGCAA
GGCTCAGTACCATGGCCAGGATACCTGCTGCTTCAACTACCCCGGCGGAC
AGATGCTCCAGACGCAATTCTGGGATGCTGATCCAGCTATTGGGCCAGCA
GATTCCTGGACTATCCATGGACTCTGGTGGGTTTAATCCTTGTCCCTCTT
TACCAGACTTATACCTGTCACGTATTATATATTATCGCCGTCCGGTACTG
ACATACGTTCCCCGCTACATAGGCCCGACCATTGCAACGGCGGCTTCGAT
CAGTACTGTGACTCCGGGAGACGGTACAGCAATATCTCGTTGATCCTAGT
TGATTCTGGTCGTGGGGATCTACTAGACTATATGAGCGACTTCTGGAAGG
ACTTCAGGGGCGATGATGCGAATCTCTGGGAGCATGAGTGGAACAAGCAC
GGCACTTGTGTCAGCACGCTAGAGACTCACTGCTACACCGACTATTACCC
ACAACAAGAGGTTGTCGACTACTTCGACCGGACAGTCGAAGTCTTTAGAA
CCCTGCCTACCTACGAGGTCTGTCTTCCTGCACTCATTGTAGAAGAACGA
AACTAAACACACCACTCTGCAGACACTCGCCAAAGCCGGCATTACCCCCT
CCTACACGCAAACCTACACTCGCGATGAGATTGTCAATGCCCTCTCCAAG
GCCCATGGTGCCGAGGTGACAGTCCGATGTCGACACCAGGCTATCAACGA
AGTATGGTACTACTTCAACATCGCCGGGCCACTGCAGACGGGCAAATTCG
TCCCATCTGACCCAGGTCAGCAAACCAACCACCTCACAAGTTGCCGATAC
TAATGACTACAACAGATGGCCAAACATCCAACTGCCCCCGCAGCGGCATC
CACTACATTCCCAAGACTCCCCGAAACGGTCACGAGCCAACCAAGACATC
CCGTGGACCTGCTGAGCCGACCGCACCGAGCGCGCCCTTTTCAGGAAAAG
GGAACCTAATGATCTCAACTAACGGTCAGAAGCGAGGCTGCATCATTAGT
CACGGCGCGTGGTTCACCTCGGGAACCTGTGCGACTTTCACGGCCACTAA
GGCGTCTGGTATGTGTTCTCCGTTGCTGCTTTCCTATTCAGGCGGGCAGT
CAGTAACTGACGGCCCTTCTTGACACCGCAGATGACACAGTCACCCTAAA
ATCCAGCAAGGGGGACTGCGGGTTCTCGCATGATGTCTTCACCTGCGGCG
GATTCATCCGGTCGCCGACTCAATTTACTGTAAGCATCTCACCCCGCCCT
TTCTTCTTAAATCCACGTGCACCCCACCAAGACACCTGATGTATATTTGT
CTAATCCCTTCCAGGTCGAAGACGGCATGCTCGCCTACAATGACAACACA
ACCTTCTTCGCAGACAAGGCGCCCAAAGGGCCAACGAAGAGCAAAGTCTT
CGCGACGCAAGACGACCATCCTCTCGAGCTATCCATCACATGGAGAGAGG
CTTGA
back to top

Coding sequence (CDS) from alignment at MCQH01000027:9793..11447-

>ATCC10864_001320-T1 ID=ATCC10864_001320-T1|Name=ATCC10864_001320-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=7776bp|location=Sequence derived from alignment at MCQH01000027:9793..11447- (Aspergillus niger ATCC 10864)
GTCGAAGACGGCATGCTCGCCTACAATGACAACACAACCTTCTTCGCAGA
CAAGGCGCCCAAAGGGCCAACGAAGAGCAAAGTCTTCGCGACGCAAGACG
ACCATCCTCTCGAGCTATCCATCACATGGAGAGAGGCTTGAATGACACAG
TCACCCTAAAATCCAGCAAGGGGGACTGCGGGTTCTCGCATGATGTCTTC
ACCTGCGGCGGATTCATCCGGTCGCCGACTCAATTTACTATGGCCAAACA
TCCAACTGCCCCCGCAGCGGCATCCACTACATTCCCAAGACTCCCCGAAA
CGGTCACGAGCCAACCAAGACATCCCGTGGACCTGCTGAGCCGACCGCAC
CGAGCGCGCCCTTTTCAGGAAAAGGGAACCTAATGATCTCAACTAACGGT
CAGAAGCGAGGCTGCATCATTAGTCACGGCGCGTGGTTCACCTCGGGAAC
CTGTGCGACTTTCACGGCCACTAAGGCGTCTGACACTCGCCAAAGCCGGC
ATTACCCCCTCCTACACGCAAACCTACACTCGCGATGAGATTGTCAATGC
CCTCTCCAAGGCCCATGGTGCCGAGGTGACAGTCCGATGTCGACACCAGG
CTATCAACGAAGTATGGTACTACTTCAACATCGCCGGGCCACTGCAGACG
GGCAAATTCGTCCCATCTGACCCAGGCCCGACCATTGCAACGGCGGCTTC
GATCAGTACTGTGACTCCGGGAGACGGTACAGCAATATCTCGTTGATCCT
AGTTGATTCTGGTCGTGGGGATCTACTAGACTATATGAGCGACTTCTGGA
AGGACTTCAGGGGCGATGATGCGAATCTCTGGGAGCATGAGTGGAACAAG
CACGGCACTTGTGTCAGCACGCTAGAGACTCACTGCTACACCGACTATTA
CCCACAACAAGAGGTTGTCGACTACTTCGACCGGACAGTCGAAGTCTTTA
GAACCCTGCCTACCTACGAGATGCTTGATACCGGTAGCACTAGTGCGGTC
GGGTCCACCGCCATCTCCATGAGGGACCGACTGCTTCAGAGTATGCCAGG
GCCTCAACAGGTCTTAAAAGCTATAACTGGATCATTGGGTGTCTCGTCGC
TTTCGGTTTCAGATTATAGTTCGTCCGAAGCAACCTTCCGGCAATGTCCT
TCCTCCGAAGTGAGCTGCAAGGCTCAGTACCATGGCCAGGATACCTGCTG
CTTCAACTACCCCGGCGGACAGATGCTCCAGACGCAATTCTGGGATGCTG
ATCCAGCTATTGGGCCAGCAGATTCCTGGACTATCCATGGACTCTGGTCG
AAGACGGCATGCTCGCCTACAATGACAACACAACCTTCTTCGCAGACAAG
GCGCCCAAAGGGCCAACGAAGAGCAAAGTCTTCGCGACGCAAGACGACCA
TCCTCTCGAGCTATCCATCACATGGAGAGAGGCTTGAATGACACAGTCAC
CCTAAAATCCAGCAAGGGGGACTGCGGGTTCTCGCATGATGTCTTCACCT
GCGGCGGATTCATCCGGTCGCCGACTCAATTTACTATGGCCAAACATCCA
ACTGCCCCCGCAGCGGCATCCACTACATTCCCAAGACTCCCCGAAACGGT
CACGAGCCAACCAAGACATCCCGTGGACCTGCTGAGCCGACCGCACCGAG
CGCGCCCTTTTCAGGAAAAGGGAACCTAATGATCTCAACTAACGGTCAGA
AGCGAGGCTGCATCATTAGTCACGGCGCGTGGTTCACCTCGGGAACCTGT
GCGACTTTCACGGCCACTAAGGCGTCTGACACTCGCCAAAGCCGGCATTA
CCCCCTCCTACACGCAAACCTACACTCGCGATGAGATTGTCAATGCCCTC
TCCAAGGCCCATGGTGCCGAGGTGACAGTCCGATGTCGACACCAGGCTAT
CAACGAAGTATGGTACTACTTCAACATCGCCGGGCCACTGCAGACGGGCA
AATTCGTCCCATCTGACCCAGGCCCGACCATTGCAACGGCGGCTTCGATC
AGTACTGTGACTCCGGGAGACGGTACAGCAATATCTCGTTGATCCTAGTT
GATTCTGGTCGTGGGGATCTACTAGACTATATGAGCGACTTCTGGAAGGA
CTTCAGGGGCGATGATGCGAATCTCTGGGAGCATGAGTGGAACAAGCACG
GCACTTGTGTCAGCACGCTAGAGACTCACTGCTACACCGACTATTACCCA
CAACAAGAGGTTGTCGACTACTTCGACCGGACAGTCGAAGTCTTTAGAAC
CCTGCCTACCTACGAGATGCTTGATACCGGTAGCACTAGTGCGGTCGGGT
CCACCGCCATCTCCATGAGGGACCGACTGCTTCAGAGTATGCCAGGGCCT
CAACAGGTCTTAAAAGCTATAACTGGATCATTGGGTGTCTCGTCGCTTTC
GGTTTCAGATTATAGTTCGTCCGAAGCAACCTTCCGGCAATGTCCTTCCT
CCGAAGTGAGCTGCAAGGCTCAGTACCATGGCCAGGATACCTGCTGCTTC
AACTACCCCGGCGGACAGATGCTCCAGACGCAATTCTGGGATGCTGATCC
AGCTATTGGGCCAGCAGATTCCTGGACTATCCATGGACTCTGGTCGAAGA
CGGCATGCTCGCCTACAATGACAACACAACCTTCTTCGCAGACAAGGCGC
CCAAAGGGCCAACGAAGAGCAAAGTCTTCGCGACGCAAGACGACCATCCT
CTCGAGCTATCCATCACATGGAGAGAGGCTTGAATGACACAGTCACCCTA
AAATCCAGCAAGGGGGACTGCGGGTTCTCGCATGATGTCTTCACCTGCGG
CGGATTCATCCGGTCGCCGACTCAATTTACTATGGCCAAACATCCAACTG
CCCCCGCAGCGGCATCCACTACATTCCCAAGACTCCCCGAAACGGTCACG
AGCCAACCAAGACATCCCGTGGACCTGCTGAGCCGACCGCACCGAGCGCG
CCCTTTTCAGGAAAAGGGAACCTAATGATCTCAACTAACGGTCAGAAGCG
AGGCTGCATCATTAGTCACGGCGCGTGGTTCACCTCGGGAACCTGTGCGA
CTTTCACGGCCACTAAGGCGTCTGACACTCGCCAAAGCCGGCATTACCCC
CTCCTACACGCAAACCTACACTCGCGATGAGATTGTCAATGCCCTCTCCA
AGGCCCATGGTGCCGAGGTGACAGTCCGATGTCGACACCAGGCTATCAAC
GAAGTATGGTACTACTTCAACATCGCCGGGCCACTGCAGACGGGCAAATT
CGTCCCATCTGACCCAGGCCCGACCATTGCAACGGCGGCTTCGATCAGTA
CTGTGACTCCGGGAGACGGTACAGCAATATCTCGTTGATCCTAGTTGATT
CTGGTCGTGGGGATCTACTAGACTATATGAGCGACTTCTGGAAGGACTTC
AGGGGCGATGATGCGAATCTCTGGGAGCATGAGTGGAACAAGCACGGCAC
TTGTGTCAGCACGCTAGAGACTCACTGCTACACCGACTATTACCCACAAC
AAGAGGTTGTCGACTACTTCGACCGGACAGTCGAAGTCTTTAGAACCCTG
CCTACCTACGAGATGCTTGATACCGGTAGCACTAGTGCGGTCGGGTCCAC
CGCCATCTCCATGAGGGACCGACTGCTTCAGAGTATGCCAGGGCCTCAAC
AGGTCTTAAAAGCTATAACTGGATCATTGGGTGTCTCGTCGCTTTCGGTT
TCAGATTATAGTTCGTCCGAAGCAACCTTCCGGCAATGTCCTTCCTCCGA
AGTGAGCTGCAAGGCTCAGTACCATGGCCAGGATACCTGCTGCTTCAACT
ACCCCGGCGGACAGATGCTCCAGACGCAATTCTGGGATGCTGATCCAGCT
ATTGGGCCAGCAGATTCCTGGACTATCCATGGACTCTGGTCGAAGACGGC
ATGCTCGCCTACAATGACAACACAACCTTCTTCGCAGACAAGGCGCCCAA
AGGGCCAACGAAGAGCAAAGTCTTCGCGACGCAAGACGACCATCCTCTCG
AGCTATCCATCACATGGAGAGAGGCTTGAATGACACAGTCACCCTAAAAT
CCAGCAAGGGGGACTGCGGGTTCTCGCATGATGTCTTCACCTGCGGCGGA
TTCATCCGGTCGCCGACTCAATTTACTATGGCCAAACATCCAACTGCCCC
CGCAGCGGCATCCACTACATTCCCAAGACTCCCCGAAACGGTCACGAGCC
AACCAAGACATCCCGTGGACCTGCTGAGCCGACCGCACCGAGCGCGCCCT
TTTCAGGAAAAGGGAACCTAATGATCTCAACTAACGGTCAGAAGCGAGGC
TGCATCATTAGTCACGGCGCGTGGTTCACCTCGGGAACCTGTGCGACTTT
CACGGCCACTAAGGCGTCTGACACTCGCCAAAGCCGGCATTACCCCCTCC
TACACGCAAACCTACACTCGCGATGAGATTGTCAATGCCCTCTCCAAGGC
CCATGGTGCCGAGGTGACAGTCCGATGTCGACACCAGGCTATCAACGAAG
TATGGTACTACTTCAACATCGCCGGGCCACTGCAGACGGGCAAATTCGTC
CCATCTGACCCAGGCCCGACCATTGCAACGGCGGCTTCGATCAGTACTGT
GACTCCGGGAGACGGTACAGCAATATCTCGTTGATCCTAGTTGATTCTGG
TCGTGGGGATCTACTAGACTATATGAGCGACTTCTGGAAGGACTTCAGGG
GCGATGATGCGAATCTCTGGGAGCATGAGTGGAACAAGCACGGCACTTGT
GTCAGCACGCTAGAGACTCACTGCTACACCGACTATTACCCACAACAAGA
GGTTGTCGACTACTTCGACCGGACAGTCGAAGTCTTTAGAACCCTGCCTA
CCTACGAGATGCTTGATACCGGTAGCACTAGTGCGGTCGGGTCCACCGCC
ATCTCCATGAGGGACCGACTGCTTCAGAGTATGCCAGGGCCTCAACAGGT
CTTAAAAGCTATAACTGGATCATTGGGTGTCTCGTCGCTTTCGGTTTCAG
ATTATAGTTCGTCCGAAGCAACCTTCCGGCAATGTCCTTCCTCCGAAGTG
AGCTGCAAGGCTCAGTACCATGGCCAGGATACCTGCTGCTTCAACTACCC
CGGCGGACAGATGCTCCAGACGCAATTCTGGGATGCTGATCCAGCTATTG
GGCCAGCAGATTCCTGGACTATCCATGGACTCTGGTCGAAGACGGCATGC
TCGCCTACAATGACAACACAACCTTCTTCGCAGACAAGGCGCCCAAAGGG
CCAACGAAGAGCAAAGTCTTCGCGACGCAAGACGACCATCCTCTCGAGCT
ATCCATCACATGGAGAGAGGCTTGAATGACACAGTCACCCTAAAATCCAG
CAAGGGGGACTGCGGGTTCTCGCATGATGTCTTCACCTGCGGCGGATTCA
TCCGGTCGCCGACTCAATTTACTATGGCCAAACATCCAACTGCCCCCGCA
GCGGCATCCACTACATTCCCAAGACTCCCCGAAACGGTCACGAGCCAACC
AAGACATCCCGTGGACCTGCTGAGCCGACCGCACCGAGCGCGCCCTTTTC
AGGAAAAGGGAACCTAATGATCTCAACTAACGGTCAGAAGCGAGGCTGCA
TCATTAGTCACGGCGCGTGGTTCACCTCGGGAACCTGTGCGACTTTCACG
GCCACTAAGGCGTCTGACACTCGCCAAAGCCGGCATTACCCCCTCCTACA
CGCAAACCTACACTCGCGATGAGATTGTCAATGCCCTCTCCAAGGCCCAT
GGTGCCGAGGTGACAGTCCGATGTCGACACCAGGCTATCAACGAAGTATG
GTACTACTTCAACATCGCCGGGCCACTGCAGACGGGCAAATTCGTCCCAT
CTGACCCAGGCCCGACCATTGCAACGGCGGCTTCGATCAGTACTGTGACT
CCGGGAGACGGTACAGCAATATCTCGTTGATCCTAGTTGATTCTGGTCGT
GGGGATCTACTAGACTATATGAGCGACTTCTGGAAGGACTTCAGGGGCGA
TGATGCGAATCTCTGGGAGCATGAGTGGAACAAGCACGGCACTTGTGTCA
GCACGCTAGAGACTCACTGCTACACCGACTATTACCCACAACAAGAGGTT
GTCGACTACTTCGACCGGACAGTCGAAGTCTTTAGAACCCTGCCTACCTA
CGAGATGCTTGATACCGGTAGCACTAGTGCGGTCGGGTCCACCGCCATCT
CCATGAGGGACCGACTGCTTCAGAGTATGCCAGGGCCTCAACAGGTCTTA
AAAGCTATAACTGGATCATTGGGTGTCTCGTCGCTTTCGGTTTCAGATTA
TAGTTCGTCCGAAGCAACCTTCCGGCAATGTCCTTCCTCCGAAGTGAGCT
GCAAGGCTCAGTACCATGGCCAGGATACCTGCTGCTTCAACTACCCCGGC
GGACAGATGCTCCAGACGCAATTCTGGGATGCTGATCCAGCTATTGGGCC
AGCAGATTCCTGGACTATCCATGGACTCTGGTCGAAGACGGCATGCTCGC
CTACAATGACAACACAACCTTCTTCGCAGACAAGGCGCCCAAAGGGCCAA
CGAAGAGCAAAGTCTTCGCGACGCAAGACGACCATCCTCTCGAGCTATCC
ATCACATGGAGAGAGGCTTGAATGACACAGTCACCCTAAAATCCAGCAAG
GGGGACTGCGGGTTCTCGCATGATGTCTTCACCTGCGGCGGATTCATCCG
GTCGCCGACTCAATTTACTATGGCCAAACATCCAACTGCCCCCGCAGCGG
CATCCACTACATTCCCAAGACTCCCCGAAACGGTCACGAGCCAACCAAGA
CATCCCGTGGACCTGCTGAGCCGACCGCACCGAGCGCGCCCTTTTCAGGA
AAAGGGAACCTAATGATCTCAACTAACGGTCAGAAGCGAGGCTGCATCAT
TAGTCACGGCGCGTGGTTCACCTCGGGAACCTGTGCGACTTTCACGGCCA
CTAAGGCGTCTGACACTCGCCAAAGCCGGCATTACCCCCTCCTACACGCA
AACCTACACTCGCGATGAGATTGTCAATGCCCTCTCCAAGGCCCATGGTG
CCGAGGTGACAGTCCGATGTCGACACCAGGCTATCAACGAAGTATGGTAC
TACTTCAACATCGCCGGGCCACTGCAGACGGGCAAATTCGTCCCATCTGA
CCCAGGCCCGACCATTGCAACGGCGGCTTCGATCAGTACTGTGACTCCGG
GAGACGGTACAGCAATATCTCGTTGATCCTAGTTGATTCTGGTCGTGGGG
ATCTACTAGACTATATGAGCGACTTCTGGAAGGACTTCAGGGGCGATGAT
GCGAATCTCTGGGAGCATGAGTGGAACAAGCACGGCACTTGTGTCAGCAC
GCTAGAGACTCACTGCTACACCGACTATTACCCACAACAAGAGGTTGTCG
ACTACTTCGACCGGACAGTCGAAGTCTTTAGAACCCTGCCTACCTACGAG
ATGCTTGATACCGGTAGCACTAGTGCGGTCGGGTCCACCGCCATCTCCAT
GAGGGACCGACTGCTTCAGAGTATGCCAGGGCCTCAACAGGTCTTAAAAG
CTATAACTGGATCATTGGGTGTCTCGTCGCTTTCGGTTTCAGATTATAGT
TCGTCCGAAGCAACCTTCCGGCAATGTCCTTCCTCCGAAGTGAGCTGCAA
GGCTCAGTACCATGGCCAGGATACCTGCTGCTTCAACTACCCCGGCGGAC
AGATGCTCCAGACGCAATTCTGGGATGCTGATCCAGCTATTGGGCCAGCA
GATTCCTGGACTATCCATGGACTCTG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0033897ribonuclease T2 activity
GO:0003723RNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RNY1ATCC10864_001320Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001320-T1ATCC10864_001320-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001320-T1.cdsATCC10864_001320-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001320-T1.exon6ATCC10864_001320-T1.exon6Aspergillus niger ATCC 10864exon
ATCC10864_001320-T1.exon5ATCC10864_001320-T1.exon5Aspergillus niger ATCC 10864exon
ATCC10864_001320-T1.exon4ATCC10864_001320-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_001320-T1.exon3ATCC10864_001320-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_001320-T1.exon2ATCC10864_001320-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_001320-T1.exon1ATCC10864_001320-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR036430
PFAMPF00445
InterProIPR001568
InterProIPR033697
InterProIPR018188
InterProIPR033130
Properties
Property NameValue
Productribonuclease T2-like
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000027supercontigMCQH01000027:9793..11447 -
Powered by Drupal