You are here

Home

ATCC10864_001337-T1, ATCC10864_001337-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_001337-T1
Unique NameATCC10864_001337-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000027:77955..78985-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_001337-T1 ID=ATCC10864_001337-T1|Name=ATCC10864_001337-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1031bp|location=Sequence derived from alignment at MCQH01000027:77955..78985- (Aspergillus niger ATCC 10864)
ATGTCGGTCGTTTCTCTTCTTGGCGTGAAAATCGTCAATAATCCTGCCTC
TTTCCTCGACCCCTATCAATTTGAGATCACTTTCGAATGTCTTGAACAGC
TGCAGAAAGGTACACTGTGAACCCCGCTCCCGTTAATTGGCCGCCACTAA
CGAGTTTCCAGATCTGGAGTGGAAGCTCACCTACGTCGGTTCGGCGACAT
CGTAAGTTGGACCTGAAGCGAGATAAAATCAGATCTATCTGCTAACCACC
TGTTTCTCTAGCTCCGAGTATGACCAGGAACTCGACTCCCTGCTGGTGGG
ACCGATCCCCGTTGGTGTCAACAAGTTCATCTTCGAGGCCGACCCCCCAG
ACCTCAAGCGCATCCCTACTTCCGAAATCCTGGGAGTTACCGTGATTCTC
CTCACTTGCAGCTATGACGGCAGAGAATTCGTTCGTGTCGGTTACTATGT
AAACAACGAATACGATTCCGAGGAGCTTATGGAGCAGCCGCCGGCTCGGC
CGATCATCGAACGCATTCGTCGGAATATCCTTGCTGAGAAGCCCAGAGTA
ACCCGGTTTGCCATCAAATGGTAGGTATCATCTATTTGTTTTTCTTGTCA
TACGATACTAATAACTACCGCCTAGGGACTCGGAGGAATCTGCTCCCGCT
GAATACCCGCCAGATCAGCCCGAAGCCGACCAGGAGGGAGATGACAGTGC
CGCCTACGGTGCAGAGGAAGCAGAGCTTGAAGCAGCCCTCTTCAAGGAGC
TCAACGAGCTGGAGCCTAAGACCGAAGATCAGGAGATGGAGGGAACCGAA
GGCCCTGCCACCAAGGAAGAAGAGGAGGAAGATATCTCGGATGCCGAGTC
TGAGGACATCGAAGATGAGAGTGACGAAGATGAGGAGGAACTCGACGAGG
AAGAGGGCGACGACGGCGATGAGGACGTCGAAATGGGCGATGATTCCGAG
CAGAAGGATGAATCAGCCGGAGGCGCCAGCAACAACAACCCGGCGGCCCA
TCAACAACAGCCCGAGTTGATGGTGCACTAA
back to top

Coding sequence (CDS) from alignment at MCQH01000027:77955..78985-

>ATCC10864_001337-T1 ID=ATCC10864_001337-T1|Name=ATCC10864_001337-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3456bp|location=Sequence derived from alignment at MCQH01000027:77955..78985- (Aspergillus niger ATCC 10864)
GGACTCGGAGGAATCTGCTCCCGCTGAATACCCGCCAGATCAGCCCGAAG
CCGACCAGGAGGGAGATGACAGTGCCGCCTACGGTGCAGAGGAAGCAGAG
CTTGAAGCAGCCCTCTTCAAGGAGCTCAACGAGCTGGAGCCTAAGACCGA
AGATCAGGAGATGGAGGGAACCGAAGGCCCTGCCACCAAGGAAGAAGAGG
AGGAAGATATCTCGGATGCCGAGTCTGAGGACATCGAAGATGAGAGTGAC
GAAGATGAGGAGGAACTCGACGAGGAAGAGGGCGACGACGGCGATGAGGA
CGTCGAAATGGGCGATGATTCCGAGCAGAAGGATGAATCAGCCGGAGGCG
CCAGCAACAACAACCCGGCGGCCCATCAACAACAGCCCGAGTTGATGGTG
CACTAACTCCGAGTATGACCAGGAACTCGACTCCCTGCTGGTGGGACCGA
TCCCCGTTGGTGTCAACAAGTTCATCTTCGAGGCCGACCCCCCAGACCTC
AAGCGCATCCCTACTTCCGAAATCCTGGGAGTTACCGTGATTCTCCTCAC
TTGCAGCTATGACGGCAGAGAATTCGTTCGTGTCGGTTACTATGTAAACA
ACGAATACGATTCCGAGGAGCTTATGGAGCAGCCGCCGGCTCGGCCGATC
ATCGAACGCATTCGTCGGAATATCCTTGCTGAGAAGCCCAGAGTAACCCG
GTTTGCCATCAAATGATCTGGAGTGGAAGCTCACCTACGTCGGTTCGGCG
ACATCATGTCGGTCGTTTCTCTTCTTGGCGTGAAAATCGTCAATAATCCT
GCCTCTTTCCTCGACCCCTATCAATTTGAGATCACTTTCGAATGTCTTGA
ACAGCTGCAGAAAGGGACTCGGAGGAATCTGCTCCCGCTGAATACCCGCC
AGATCAGCCCGAAGCCGACCAGGAGGGAGATGACAGTGCCGCCTACGGTG
CAGAGGAAGCAGAGCTTGAAGCAGCCCTCTTCAAGGAGCTCAACGAGCTG
GAGCCTAAGACCGAAGATCAGGAGATGGAGGGAACCGAAGGCCCTGCCAC
CAAGGAAGAAGAGGAGGAAGATATCTCGGATGCCGAGTCTGAGGACATCG
AAGATGAGAGTGACGAAGATGAGGAGGAACTCGACGAGGAAGAGGGCGAC
GACGGCGATGAGGACGTCGAAATGGGCGATGATTCCGAGCAGAAGGATGA
ATCAGCCGGAGGCGCCAGCAACAACAACCCGGCGGCCCATCAACAACAGC
CCGAGTTGATGGTGCACTAACTCCGAGTATGACCAGGAACTCGACTCCCT
GCTGGTGGGACCGATCCCCGTTGGTGTCAACAAGTTCATCTTCGAGGCCG
ACCCCCCAGACCTCAAGCGCATCCCTACTTCCGAAATCCTGGGAGTTACC
GTGATTCTCCTCACTTGCAGCTATGACGGCAGAGAATTCGTTCGTGTCGG
TTACTATGTAAACAACGAATACGATTCCGAGGAGCTTATGGAGCAGCCGC
CGGCTCGGCCGATCATCGAACGCATTCGTCGGAATATCCTTGCTGAGAAG
CCCAGAGTAACCCGGTTTGCCATCAAATGATCTGGAGTGGAAGCTCACCT
ACGTCGGTTCGGCGACATCATGTCGGTCGTTTCTCTTCTTGGCGTGAAAA
TCGTCAATAATCCTGCCTCTTTCCTCGACCCCTATCAATTTGAGATCACT
TTCGAATGTCTTGAACAGCTGCAGAAAGGGACTCGGAGGAATCTGCTCCC
GCTGAATACCCGCCAGATCAGCCCGAAGCCGACCAGGAGGGAGATGACAG
TGCCGCCTACGGTGCAGAGGAAGCAGAGCTTGAAGCAGCCCTCTTCAAGG
AGCTCAACGAGCTGGAGCCTAAGACCGAAGATCAGGAGATGGAGGGAACC
GAAGGCCCTGCCACCAAGGAAGAAGAGGAGGAAGATATCTCGGATGCCGA
GTCTGAGGACATCGAAGATGAGAGTGACGAAGATGAGGAGGAACTCGACG
AGGAAGAGGGCGACGACGGCGATGAGGACGTCGAAATGGGCGATGATTCC
GAGCAGAAGGATGAATCAGCCGGAGGCGCCAGCAACAACAACCCGGCGGC
CCATCAACAACAGCCCGAGTTGATGGTGCACTAACTCCGAGTATGACCAG
GAACTCGACTCCCTGCTGGTGGGACCGATCCCCGTTGGTGTCAACAAGTT
CATCTTCGAGGCCGACCCCCCAGACCTCAAGCGCATCCCTACTTCCGAAA
TCCTGGGAGTTACCGTGATTCTCCTCACTTGCAGCTATGACGGCAGAGAA
TTCGTTCGTGTCGGTTACTATGTAAACAACGAATACGATTCCGAGGAGCT
TATGGAGCAGCCGCCGGCTCGGCCGATCATCGAACGCATTCGTCGGAATA
TCCTTGCTGAGAAGCCCAGAGTAACCCGGTTTGCCATCAAATGATCTGGA
GTGGAAGCTCACCTACGTCGGTTCGGCGACATCATGTCGGTCGTTTCTCT
TCTTGGCGTGAAAATCGTCAATAATCCTGCCTCTTTCCTCGACCCCTATC
AATTTGAGATCACTTTCGAATGTCTTGAACAGCTGCAGAAAGGGACTCGG
AGGAATCTGCTCCCGCTGAATACCCGCCAGATCAGCCCGAAGCCGACCAG
GAGGGAGATGACAGTGCCGCCTACGGTGCAGAGGAAGCAGAGCTTGAAGC
AGCCCTCTTCAAGGAGCTCAACGAGCTGGAGCCTAAGACCGAAGATCAGG
AGATGGAGGGAACCGAAGGCCCTGCCACCAAGGAAGAAGAGGAGGAAGAT
ATCTCGGATGCCGAGTCTGAGGACATCGAAGATGAGAGTGACGAAGATGA
GGAGGAACTCGACGAGGAAGAGGGCGACGACGGCGATGAGGACGTCGAAA
TGGGCGATGATTCCGAGCAGAAGGATGAATCAGCCGGAGGCGCCAGCAAC
AACAACCCGGCGGCCCATCAACAACAGCCCGAGTTGATGGTGCACTAACT
CCGAGTATGACCAGGAACTCGACTCCCTGCTGGTGGGACCGATCCCCGTT
GGTGTCAACAAGTTCATCTTCGAGGCCGACCCCCCAGACCTCAAGCGCAT
CCCTACTTCCGAAATCCTGGGAGTTACCGTGATTCTCCTCACTTGCAGCT
ATGACGGCAGAGAATTCGTTCGTGTCGGTTACTATGTAAACAACGAATAC
GATTCCGAGGAGCTTATGGAGCAGCCGCCGGCTCGGCCGATCATCGAACG
CATTCGTCGGAATATCCTTGCTGAGAAGCCCAGAGTAACCCGGTTTGCCA
TCAAATGATCTGGAGTGGAAGCTCACCTACGTCGGTTCGGCGACATCATG
TCGGTCGTTTCTCTTCTTGGCGTGAAAATCGTCAATAATCCTGCCTCTTT
CCTCGACCCCTATCAATTTGAGATCACTTTCGAATGTCTTGAACAGCTGC
AGAAAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0042393histone binding
Vocabulary: Biological Process
TermDefinition
GO:0006334nucleosome assembly
GO:0006337nucleosome disassembly
GO:0016573histone acetylation
GO:0006333chromatin assembly or disassembly
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASF1ATCC10864_001337Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001337-T1ATCC10864_001337-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001337-T1.cdsATCC10864_001337-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001337-T1.exon4ATCC10864_001337-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_001337-T1.exon3ATCC10864_001337-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_001337-T1.exon2ATCC10864_001337-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_001337-T1.exon1ATCC10864_001337-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR036747
InterProIPR006818
InterProIPR017282
PFAMPF04729
Properties
Property NameValue
NoteBUSCO:EOG09264COX
ProductHistone chaperone asf1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000027supercontigMCQH01000027:77955..78985 -
Powered by Drupal