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ATCC10864_001339-T1, ATCC10864_001339-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_001339-T1
Unique NameATCC10864_001339-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000027:83574..85202+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_001339-T1 ID=ATCC10864_001339-T1|Name=ATCC10864_001339-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1629bp|location=Sequence derived from alignment at MCQH01000027:83574..85202+ (Aspergillus niger ATCC 10864)
ATGGCGCCCTCCAGCTCTCCAGAACCTGTTGTGGACGAATCCCACGAGTC
CTCTGACTCGGAGGTCGAGCAGACCGAACTGCAATCCCGCGCCCCCAAGA
GAAGACGTCTCTCGGAGTCTTCCACCGACTCCTACGTTGCTCCGGCGCCG
CTCCCCACACTCTCCCGTATCAAGAAGAAGGGCGCAGATGAAGAGAATAA
GCCCGCCACATCGGATAAAGACGAGCCTGTCCTGATCAAGGATGCTCTGG
AGATTGGTCTCAATGATGCGCAGAACTCATTCGCCTCTCTCAACGTGGCG
CCGTGGTTGATCGGCTCCCTAACCACCATGGCTGTTCGCAAACCAACCGC
CATTCAAAAAGCGTGTATTCCTGAGATCCTAAACGGCCGGGACTGCATTG
GTGGAAGCCGGACTGGTTCCGGTAAGACCATTGCCTTCTCAGTGCCCATG
CTGCAGAAATGGGCGGAGGATCCATTCGGTATCTTCGGCCTTGTCCTCAC
TCCAACTCGGTAAGAACCTATCCCCCACTCCCAATGCCCATCATTCATCA
TCTAATCCGATGTGCCTAGTGAACTTGCCCTCCAAATCTACGAACAAATC
AAAGCCATCTCCGCCCCCCAAAGCATGAAACCCCTCCTCATCACCGGCGG
CACCGACATGCGCCCACAAGCCGTGGCCCTCGCACAACGCCCACACGTCG
TGATCGCCACGCCCGGCCGTCTCGCCGACCACATCAACACCTCCGGCTCC
GACACCATCCGCGGCCTGAAGCGCGTCCGCATGGTCGTTCTCGACGAAGC
AGACCGGCTCCTCGCCCCAGGACACGGCAGCATGCTCCCGGACGTGGAAA
CCTGCCTCTCAGCTCTCCCACCCTCCAGCGAGCGCCAAACCCTCCTCTTC
ACAGCAACCCTAACACCGGAAGTGCGCGCGCTGAAATCCATGCCCCGGCC
GTCCACCAAACCCCCCATCTTCGTCACCGAAATCTCCACCGAAAACAACG
CCTCTATCCCCCCGACCCTTAAACAAACCTACCTCAAAGTCCCCATGACC
CACCGCGAAGCCTTCCTCCACGTCCTCCTCTCCACGGAAGCGAACGCCTC
CAAACCAGCCATCATCTTCTGCAACCACACCAAGACGGCGGACTTGCTGG
AGCGCATGCTCCGCAGGCTGTCTCACCGCGTTACATCCCTGCATAGTCTG
CTGCCGCAGTCGGAGCGCAATGCCAATCTGGCGAGGTTCAGAGCGTCCGC
GGCGAGGTTGCTCGTTGCGACGGATGTGGCGTCCCGTGGTTTGGATATTC
CGTCGGTGGAGTTGGTGGTCAATTTTGATGTGCCCAGGAATCCGGATGAT
TATGTGCATCGGGTTGGTCGAACGGCGCGTGCAGGGAGAAAGGGTGAGTC
GGTCACGCTTGTTGGGCAACGGGATGTGAGTCTGGTGTTGGCGATTGAGG
AGAGGGTGGGTAGGCAGATGGAGGAGTGGAGTGAGGAGGGTGTTAGTGTT
GAGGGTAGGGTTGTTAGGACGGGTGTGTTGAAGGAGGTTGGTGAGGCCAA
GAGAGAGGCTGCGGGTGAGATTGAGGAGGGGAGAGATGTGTTGGGAAGGA
AGAGGAATAAGTTGAAGAAGGTGCGGTAG
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Coding sequence (CDS) from alignment at MCQH01000027:83574..85202+

>ATCC10864_001339-T1 ID=ATCC10864_001339-T1|Name=ATCC10864_001339-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3138bp|location=Sequence derived from alignment at MCQH01000027:83574..85202+ (Aspergillus niger ATCC 10864)
ATGGCGCCCTCCAGCTCTCCAGAACCTGTTGTGGACGAATCCCACGAGTC
CTCTGACTCGGAGGTCGAGCAGACCGAACTGCAATCCCGCGCCCCCAAGA
GAAGACGTCTCTCGGAGTCTTCCACCGACTCCTACGTTGCTCCGGCGCCG
CTCCCCACACTCTCCCGTATCAAGAAGAAGGGCGCAGATGAAGAGAATAA
GCCCGCCACATCGGATAAAGACGAGCCTGTCCTGATCAAGGATGCTCTGG
AGATTGGTCTCAATGATGCGCAGAACTCATTCGCCTCTCTCAACGTGGCG
CCGTGGTTGATCGGCTCCCTAACCACCATGGCTGTTCGCAAACCAACCGC
CATTCAAAAAGCGTGTATTCCTGAGATCCTAAACGGCCGGGACTGCATTG
GTGGAAGCCGGACTGGTTCCGGTAAGACCATTGCCTTCTCAGTGCCCATG
CTGCAGAAATGGGCGGAGGATCCATTCGGTATCTTCGGCCTTGTCCTCAC
TCCAACTCGTGAACTTGCCCTCCAAATCTACGAACAAATCAAAGCCATCT
CCGCCCCCCAAAGCATGAAACCCCTCCTCATCACCGGCGGCACCGACATG
CGCCCACAAGCCGTGGCCCTCGCACAACGCCCACACGTCGTGATCGCCAC
GCCCGGCCGTCTCGCCGACCACATCAACACCTCCGGCTCCGACACCATCC
GCGGCCTGAAGCGCGTCCGCATGGTCGTTCTCGACGAAGCAGACCGGCTC
CTCGCCCCAGGACACGGCAGCATGCTCCCGGACGTGGAAACCTGCCTCTC
AGCTCTCCCACCCTCCAGCGAGCGCCAAACCCTCCTCTTCACAGCAACCC
TAACACCGGAAGTGCGCGCGCTGAAATCCATGCCCCGGCCGTCCACCAAA
CCCCCCATCTTCGTCACCGAAATCTCCACCGAAAACAACGCCTCTATCCC
CCCGACCCTTAAACAAACCTACCTCAAAGTCCCCATGACCCACCGCGAAG
CCTTCCTCCACGTCCTCCTCTCCACGGAAGCGAACGCCTCCAAACCAGCC
ATCATCTTCTGCAACCACACCAAGACGGCGGACTTGCTGGAGCGCATGCT
CCGCAGGCTGTCTCACCGCGTTACATCCCTGCATAGTCTGCTGCCGCAGT
CGGAGCGCAATGCCAATCTGGCGAGGTTCAGAGCGTCCGCGGCGAGGTTG
CTCGTTGCGACGGATGTGGCGTCCCGTGGTTTGGATATTCCGTCGGTGGA
GTTGGTGGTCAATTTTGATGTGCCCAGGAATCCGGATGATTATGTGCATC
GGGTTGGTCGAACGGCGCGTGCAGGGAGAAAGGGTGAGTCGGTCACGCTT
GTTGGGCAACGGGATGTGAGTCTGGTGTTGGCGATTGAGGAGAGGGTGGG
TAGGCAGATGGAGGAGTGGAGTGAGGAGGGTGTTAGTGTTGAGGGTAGGG
TTGTTAGGACGGGTGTGTTGAAGGAGGTTGGTGAGGCCAAGAGAGAGGCT
GCGGGTGAGATTGAGGAGGGGAGAGATGTGTTGGGAAGGAAGAGGAATAA
GTTGAAGAAGGTGCGGTAGATGGCGCCCTCCAGCTCTCCAGAACCTGTTG
TGGACGAATCCCACGAGTCCTCTGACTCGGAGGTCGAGCAGACCGAACTG
CAATCCCGCGCCCCCAAGAGAAGACGTCTCTCGGAGTCTTCCACCGACTC
CTACGTTGCTCCGGCGCCGCTCCCCACACTCTCCCGTATCAAGAAGAAGG
GCGCAGATGAAGAGAATAAGCCCGCCACATCGGATAAAGACGAGCCTGTC
CTGATCAAGGATGCTCTGGAGATTGGTCTCAATGATGCGCAGAACTCATT
CGCCTCTCTCAACGTGGCGCCGTGGTTGATCGGCTCCCTAACCACCATGG
CTGTTCGCAAACCAACCGCCATTCAAAAAGCGTGTATTCCTGAGATCCTA
AACGGCCGGGACTGCATTGGTGGAAGCCGGACTGGTTCCGGTAAGACCAT
TGCCTTCTCAGTGCCCATGCTGCAGAAATGGGCGGAGGATCCATTCGGTA
TCTTCGGCCTTGTCCTCACTCCAACTCGTGAACTTGCCCTCCAAATCTAC
GAACAAATCAAAGCCATCTCCGCCCCCCAAAGCATGAAACCCCTCCTCAT
CACCGGCGGCACCGACATGCGCCCACAAGCCGTGGCCCTCGCACAACGCC
CACACGTCGTGATCGCCACGCCCGGCCGTCTCGCCGACCACATCAACACC
TCCGGCTCCGACACCATCCGCGGCCTGAAGCGCGTCCGCATGGTCGTTCT
CGACGAAGCAGACCGGCTCCTCGCCCCAGGACACGGCAGCATGCTCCCGG
ACGTGGAAACCTGCCTCTCAGCTCTCCCACCCTCCAGCGAGCGCCAAACC
CTCCTCTTCACAGCAACCCTAACACCGGAAGTGCGCGCGCTGAAATCCAT
GCCCCGGCCGTCCACCAAACCCCCCATCTTCGTCACCGAAATCTCCACCG
AAAACAACGCCTCTATCCCCCCGACCCTTAAACAAACCTACCTCAAAGTC
CCCATGACCCACCGCGAAGCCTTCCTCCACGTCCTCCTCTCCACGGAAGC
GAACGCCTCCAAACCAGCCATCATCTTCTGCAACCACACCAAGACGGCGG
ACTTGCTGGAGCGCATGCTCCGCAGGCTGTCTCACCGCGTTACATCCCTG
CATAGTCTGCTGCCGCAGTCGGAGCGCAATGCCAATCTGGCGAGGTTCAG
AGCGTCCGCGGCGAGGTTGCTCGTTGCGACGGATGTGGCGTCCCGTGGTT
TGGATATTCCGTCGGTGGAGTTGGTGGTCAATTTTGATGTGCCCAGGAAT
CCGGATGATTATGTGCATCGGGTTGGTCGAACGGCGCGTGCAGGGAGAAA
GGGTGAGTCGGTCACGCTTGTTGGGCAACGGGATGTGAGTCTGGTGTTGG
CGATTGAGGAGAGGGTGGGTAGGCAGATGGAGGAGTGGAGTGAGGAGGGT
GTTAGTGTTGAGGGTAGGGTTGTTAGGACGGGTGTGTTGAAGGAGGTTGG
TGAGGCCAAGAGAGAGGCTGCGGGTGAGATTGAGGAGGGGAGAGATGTGT
TGGGAAGGAAGAGGAATAAGTTGAAGAAGGTGCGGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0003676nucleic acid binding
GO:0003724RNA helicase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
DBP8ATCC10864_001339Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001339-T1.exon1ATCC10864_001339-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_001339-T1.exon2ATCC10864_001339-T1.exon2Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001339-T1.cdsATCC10864_001339-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001339-T1ATCC10864_001339-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF00270
InterProIPR027417
InterProIPR000629
PFAMPF00271
InterProIPR014014
InterProIPR001650
InterProIPR011545
InterProIPR014001
Properties
Property NameValue
ProductPutative RNA helicase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000027supercontigMCQH01000027:83574..85202 +
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