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Sequences
The following sequences are available for this feature:
mRNA from alignment at MCQH01000027:93808..95391- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC10864_001342-T1 ID=ATCC10864_001342-T1|Name=ATCC10864_001342-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1584bp|location=Sequence derived from alignment at MCQH01000027:93808..95391- (Aspergillus niger ATCC 10864)
ATGGCGGAGATCCGGTCCAAGGTGCGTTGCTTTGAAAGAGAATGGCCCTC
GTTTTCTCTCCGTCTGTTGCTGTGCGAGGGTGATGGAAATCCGCGATTTG
AGGGGAGGAATATTCTACGGCTGGATTGATGGAAGGGTGCTGGGATTGGG
TTGGGAGCGCAGTTGCATTGCAACGAGCGGGGTTTGGGCGACGGCAAGGA
ATATTGCACAAATCCATCCTGCTCCTCACCACTCGCGCCATCACCACCAC
AGACGAGACGAGAGAGAGAGAGAAAGCGGCAGCTTTAAACATCTGGAAAT
GCGAAGGCTAACATATCATCTACTATAACAGAACCTCTACGAGCTTCTTG
GTAATTCTCGCCCTTCCCTTACCTACCTACCTACCTACCATACCTGAGTT
CTATCCTGCACTTTGCACTACCTGTCGTGTTTGACTTTGCCTTGGTCTCT
CTTTTCGCATGTCGTCGATCCATCTACACTTCGAATTCGTGAAGGGATTA
CATCATTTTCTAACCTCAAGCGTGCTGTTGCTCGCGCTGCGCAACTACAG
GCAATGACCCTGAACTCGACCCCAACAGAGCCCCCGAGCCCCCTACGAAA
GCCGTAGACAGGCCGGCTCCCCGTGTTGGCAAGCGGGACGCTCCCAAGGA
GGCCCCTTCCCAGCCCCGTGAGAACAACAACAACTCTCGCCGTGGTGGCC
GCGCCACTGGCAACGAGGCCGGTATGTATTCCCACCTACGTTGAGTTCCG
ACTCTTTGGCAAGTACATTCCGACTGATTTCGATTGCGTTCAGCTTTCCG
TGACCGCAACGCCGGCAGAAACAACAACCGTGAGAAGCCCACCGATGAGA
AGGACGCCCAACGGCGCGGATTCCGCGCCCGTGAGGACCGTGGTGAGCGT
GTCCGCCACGACCGCCAGTCCCGCACCGGCCAGACGTAAGCCCCTCTCTT
CATCATCTTGTTCTCCATGGAGACGGGAAAAAACGAGACATGGGACCCAA
TCGAAACTGACATATCACTGGATAGCGACACCCGCAAGCAGGTGAACCAG
GGCTGGGGTAACCAGAGCGGCGAGAAGACCTGGGACGATGAGAAGGCCGG
CGAGAACATTGCTCAGACCGATGAGACCGAGCCCCAGACCCCCGGCGAGG
AGAAGCCCGAGGAGGCCGCCGACAAGTCCAAGTCCTACGCCGACTACCTT
GCCGAGAAGGCTGCCCAGGGTGACCTGAGCGCCAAGCCCGTCCGTGCTCC
CAACGAGGGCACCAAGCTCGACAAGAAGTGGGCCGCCGCCAAGGAGCTCA
AGCGTTCCGAGGAGGAGGATGCCTACATCAAGGGCAAGGAGGACAAGTCC
AAGCGCGAGAAGCAGCGCAAGGAGAAGAACTTCCTTGAGGTCGACATGCG
CTTCGTTGAGGCTCCCCGCACTGGTGGCCCTGGTCCCCGTGGCGGCCGTG
GTGGCCGTGGTGCTCGTGGTGCTCGTGGCGGCCGTGGCAACGGTCCCCGT
TCCGAGCGCCCCGCTGCCGCTGCTGCTGCTACTCCCGCTGTCGCCGTTGA
CGAGAAGAACTTCCCCAGCCTTGGCGGCAAATAA back to topCoding sequence (CDS) from alignment at MCQH01000027:93808..95391- >ATCC10864_001342-T1 ID=ATCC10864_001342-T1|Name=ATCC10864_001342-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=4560bp|location=Sequence derived from alignment at MCQH01000027:93808..95391- (Aspergillus niger ATCC 10864)
CGACACCCGCAAGCAGGTGAACCAGGGCTGGGGTAACCAGAGCGGCGAGA
AGACCTGGGACGATGAGAAGGCCGGCGAGAACATTGCTCAGACCGATGAG
ACCGAGCCCCAGACCCCCGGCGAGGAGAAGCCCGAGGAGGCCGCCGACAA
GTCCAAGTCCTACGCCGACTACCTTGCCGAGAAGGCTGCCCAGGGTGACC
TGAGCGCCAAGCCCGTCCGTGCTCCCAACGAGGGCACCAAGCTCGACAAG
AAGTGGGCCGCCGCCAAGGAGCTCAAGCGTTCCGAGGAGGAGGATGCCTA
CATCAAGGGCAAGGAGGACAAGTCCAAGCGCGAGAAGCAGCGCAAGGAGA
AGAACTTCCTTGAGGTCGACATGCGCTTCGTTGAGGCTCCCCGCACTGGT
GGCCCTGGTCCCCGTGGCGGCCGTGGTGGCCGTGGTGCTCGTGGTGCTCG
TGGCGGCCGTGGCAACGGTCCCCGTTCCGAGCGCCCCGCTGCCGCTGCTG
CTGCTACTCCCGCTGTCGCCGTTGACGAGAAGAACTTCCCCAGCCTTGGC
GGCAAATAACTTTCCGTGACCGCAACGCCGGCAGAAACAACAACCGTGAG
AAGCCCACCGATGAGAAGGACGCCCAACGGCGCGGATTCCGCGCCCGTGA
GGACCGTGGTGAGCGTGTCCGCCACGACCGCCAGTCCCGCACCGGCCAGA
CGCAATGACCCTGAACTCGACCCCAACAGAGCCCCCGAGCCCCCTACGAA
AGCCGTAGACAGGCCGGCTCCCCGTGTTGGCAAGCGGGACGCTCCCAAGG
AGGCCCCTTCCCAGCCCCGTGAGAACAACAACAACTCTCGCCGTGGTGGC
CGCGCCACTGGCAACGAGGCCGAACCTCTACGAGCTTCTTGATGGCGGAG
ATCCGGTCCAAGCGACACCCGCAAGCAGGTGAACCAGGGCTGGGGTAACC
AGAGCGGCGAGAAGACCTGGGACGATGAGAAGGCCGGCGAGAACATTGCT
CAGACCGATGAGACCGAGCCCCAGACCCCCGGCGAGGAGAAGCCCGAGGA
GGCCGCCGACAAGTCCAAGTCCTACGCCGACTACCTTGCCGAGAAGGCTG
CCCAGGGTGACCTGAGCGCCAAGCCCGTCCGTGCTCCCAACGAGGGCACC
AAGCTCGACAAGAAGTGGGCCGCCGCCAAGGAGCTCAAGCGTTCCGAGGA
GGAGGATGCCTACATCAAGGGCAAGGAGGACAAGTCCAAGCGCGAGAAGC
AGCGCAAGGAGAAGAACTTCCTTGAGGTCGACATGCGCTTCGTTGAGGCT
CCCCGCACTGGTGGCCCTGGTCCCCGTGGCGGCCGTGGTGGCCGTGGTGC
TCGTGGTGCTCGTGGCGGCCGTGGCAACGGTCCCCGTTCCGAGCGCCCCG
CTGCCGCTGCTGCTGCTACTCCCGCTGTCGCCGTTGACGAGAAGAACTTC
CCCAGCCTTGGCGGCAAATAACTTTCCGTGACCGCAACGCCGGCAGAAAC
AACAACCGTGAGAAGCCCACCGATGAGAAGGACGCCCAACGGCGCGGATT
CCGCGCCCGTGAGGACCGTGGTGAGCGTGTCCGCCACGACCGCCAGTCCC
GCACCGGCCAGACGCAATGACCCTGAACTCGACCCCAACAGAGCCCCCGA
GCCCCCTACGAAAGCCGTAGACAGGCCGGCTCCCCGTGTTGGCAAGCGGG
ACGCTCCCAAGGAGGCCCCTTCCCAGCCCCGTGAGAACAACAACAACTCT
CGCCGTGGTGGCCGCGCCACTGGCAACGAGGCCGAACCTCTACGAGCTTC
TTGATGGCGGAGATCCGGTCCAAGCGACACCCGCAAGCAGGTGAACCAGG
GCTGGGGTAACCAGAGCGGCGAGAAGACCTGGGACGATGAGAAGGCCGGC
GAGAACATTGCTCAGACCGATGAGACCGAGCCCCAGACCCCCGGCGAGGA
GAAGCCCGAGGAGGCCGCCGACAAGTCCAAGTCCTACGCCGACTACCTTG
CCGAGAAGGCTGCCCAGGGTGACCTGAGCGCCAAGCCCGTCCGTGCTCCC
AACGAGGGCACCAAGCTCGACAAGAAGTGGGCCGCCGCCAAGGAGCTCAA
GCGTTCCGAGGAGGAGGATGCCTACATCAAGGGCAAGGAGGACAAGTCCA
AGCGCGAGAAGCAGCGCAAGGAGAAGAACTTCCTTGAGGTCGACATGCGC
TTCGTTGAGGCTCCCCGCACTGGTGGCCCTGGTCCCCGTGGCGGCCGTGG
TGGCCGTGGTGCTCGTGGTGCTCGTGGCGGCCGTGGCAACGGTCCCCGTT
CCGAGCGCCCCGCTGCCGCTGCTGCTGCTACTCCCGCTGTCGCCGTTGAC
GAGAAGAACTTCCCCAGCCTTGGCGGCAAATAACTTTCCGTGACCGCAAC
GCCGGCAGAAACAACAACCGTGAGAAGCCCACCGATGAGAAGGACGCCCA
ACGGCGCGGATTCCGCGCCCGTGAGGACCGTGGTGAGCGTGTCCGCCACG
ACCGCCAGTCCCGCACCGGCCAGACGCAATGACCCTGAACTCGACCCCAA
CAGAGCCCCCGAGCCCCCTACGAAAGCCGTAGACAGGCCGGCTCCCCGTG
TTGGCAAGCGGGACGCTCCCAAGGAGGCCCCTTCCCAGCCCCGTGAGAAC
AACAACAACTCTCGCCGTGGTGGCCGCGCCACTGGCAACGAGGCCGAACC
TCTACGAGCTTCTTGATGGCGGAGATCCGGTCCAAGCGACACCCGCAAGC
AGGTGAACCAGGGCTGGGGTAACCAGAGCGGCGAGAAGACCTGGGACGAT
GAGAAGGCCGGCGAGAACATTGCTCAGACCGATGAGACCGAGCCCCAGAC
CCCCGGCGAGGAGAAGCCCGAGGAGGCCGCCGACAAGTCCAAGTCCTACG
CCGACTACCTTGCCGAGAAGGCTGCCCAGGGTGACCTGAGCGCCAAGCCC
GTCCGTGCTCCCAACGAGGGCACCAAGCTCGACAAGAAGTGGGCCGCCGC
CAAGGAGCTCAAGCGTTCCGAGGAGGAGGATGCCTACATCAAGGGCAAGG
AGGACAAGTCCAAGCGCGAGAAGCAGCGCAAGGAGAAGAACTTCCTTGAG
GTCGACATGCGCTTCGTTGAGGCTCCCCGCACTGGTGGCCCTGGTCCCCG
TGGCGGCCGTGGTGGCCGTGGTGCTCGTGGTGCTCGTGGCGGCCGTGGCA
ACGGTCCCCGTTCCGAGCGCCCCGCTGCCGCTGCTGCTGCTACTCCCGCT
GTCGCCGTTGACGAGAAGAACTTCCCCAGCCTTGGCGGCAAATAACTTTC
CGTGACCGCAACGCCGGCAGAAACAACAACCGTGAGAAGCCCACCGATGA
GAAGGACGCCCAACGGCGCGGATTCCGCGCCCGTGAGGACCGTGGTGAGC
GTGTCCGCCACGACCGCCAGTCCCGCACCGGCCAGACGCAATGACCCTGA
ACTCGACCCCAACAGAGCCCCCGAGCCCCCTACGAAAGCCGTAGACAGGC
CGGCTCCCCGTGTTGGCAAGCGGGACGCTCCCAAGGAGGCCCCTTCCCAG
CCCCGTGAGAACAACAACAACTCTCGCCGTGGTGGCCGCGCCACTGGCAA
CGAGGCCGAACCTCTACGAGCTTCTTGATGGCGGAGATCCGGTCCAAGCG
ACACCCGCAAGCAGGTGAACCAGGGCTGGGGTAACCAGAGCGGCGAGAAG
ACCTGGGACGATGAGAAGGCCGGCGAGAACATTGCTCAGACCGATGAGAC
CGAGCCCCAGACCCCCGGCGAGGAGAAGCCCGAGGAGGCCGCCGACAAGT
CCAAGTCCTACGCCGACTACCTTGCCGAGAAGGCTGCCCAGGGTGACCTG
AGCGCCAAGCCCGTCCGTGCTCCCAACGAGGGCACCAAGCTCGACAAGAA
GTGGGCCGCCGCCAAGGAGCTCAAGCGTTCCGAGGAGGAGGATGCCTACA
TCAAGGGCAAGGAGGACAAGTCCAAGCGCGAGAAGCAGCGCAAGGAGAAG
AACTTCCTTGAGGTCGACATGCGCTTCGTTGAGGCTCCCCGCACTGGTGG
CCCTGGTCCCCGTGGCGGCCGTGGTGGCCGTGGTGCTCGTGGTGCTCGTG
GCGGCCGTGGCAACGGTCCCCGTTCCGAGCGCCCCGCTGCCGCTGCTGCT
GCTACTCCCGCTGTCGCCGTTGACGAGAAGAACTTCCCCAGCCTTGGCGG
CAAATAACTTTCCGTGACCGCAACGCCGGCAGAAACAACAACCGTGAGAA
GCCCACCGATGAGAAGGACGCCCAACGGCGCGGATTCCGCGCCCGTGAGG
ACCGTGGTGAGCGTGTCCGCCACGACCGCCAGTCCCGCACCGGCCAGACG
CAATGACCCTGAACTCGACCCCAACAGAGCCCCCGAGCCCCCTACGAAAG
CCGTAGACAGGCCGGCTCCCCGTGTTGGCAAGCGGGACGCTCCCAAGGAG
GCCCCTTCCCAGCCCCGTGAGAACAACAACAACTCTCGCCGTGGTGGCCG
CGCCACTGGCAACGAGGCCGAACCTCTACGAGCTTCTTGATGGCGGAGAT
CCGGTCCAAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003723 | RNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Cross References
External references for this mRNA
| Database | Accession |
|---|
| InterPro | IPR039764 |
| InterPro | IPR006861 |
| PFAM | PF09598 |
| InterPro | IPR019084 |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| MCQH01000027 | supercontig | MCQH01000027:93808..95391 - |
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