You are here

Home

ATCC10864_001381-T1, ATCC10864_001381-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_001381-T1
Unique NameATCC10864_001381-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000027:224329..225384+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_001381-T1 ID=ATCC10864_001381-T1|Name=ATCC10864_001381-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1056bp|location=Sequence derived from alignment at MCQH01000027:224329..225384+ (Aspergillus niger ATCC 10864)
ATGGCTGCTGTTTCCCCTGCTGCCGCTAGGGCCGAGCCAGGCCAATGGAA
GAAGAACCTCTCAGCCCACGTCATTTGCCCCGAGTGCAAAGAGGTTCCCC
CGAATCTGGAGTTCCCTGGCTCTCACGAAACTGTTTGCGGCTCATGTGGT
CTGGTTCTCGCTGATCGGGAGATTGACATGCACTCAGAATGGCGTACATT
CTCCAATGACGATCAGAACAACGACGACCCTTCTCGTGTTGGAGATGCCA
TGAACCCGCTTCTCAACGGTGATCAACTAGAGACCCAGATTGCTAGTGGT
GGGTCGGGCCGCGTTCGCGACCTTTACCGTGCTCAGAACAAACAATCGAG
TGAAAAGGCAAACAAGGCTCTTCTGGCAGCCTACAAGGAAATTGGTGCTC
TTTGCGATGGTTTTAACATTCAGAAGAACGTGGCAGACACAGCGAAGTAT
CTCTTCAAGATTGTGGACGATGCCAAGGCATTCAAGGGAAAGTCCCAGGA
TGTGATCATTGCAGGCTGTATATTTATCGCCTGTCGCCAGTGCAAGGTGC
CACGTACCTTCACTGAGATCTTCGCGGTGACCAAGGTCACAAGGAAGGAA
ATTGGGCGTATCTACAAAGCTCTGGAGAAGTTTTTCACTGCACAGAACCT
CGAGCGGATCAATGCCGTGGTCTCCAGCGGAGGTGTCCCTGATCCCAACG
ACACATACACCGCCACTACTTCCACCAAGCCTAGTGACCTTTGCAACCGT
TTCTGTAACCTTCTGGATCTGCCCTTCCAGGTTACCAGCGTCTCCTCTGC
TTTATCCGATCGCGTGACAACGATGGGAGATTTGGCCGGACGTTCTCCCC
TGTCCATCGTGGCAGCCTGCATCTACATGGCATCGTACCTGATGGGACAC
GGCAAGAGCGCCAAGGAGATATCCCAGGTGGCCCATGTCAGCGATGGTAC
GATCCGCGGTGCTTACAAGCAGCTATATGCTGAAAGAGAGCGCCTCATCG
ATCCCGAGTGGATCAAAGATGGGAAGGGTGACCTGAAGAACCTACCTAAC
AGTTAA
back to top

Coding sequence (CDS) from alignment at MCQH01000027:224329..225384+

>ATCC10864_001381-T1 ID=ATCC10864_001381-T1|Name=ATCC10864_001381-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=1056bp|location=Sequence derived from alignment at MCQH01000027:224329..225384+ (Aspergillus niger ATCC 10864)
ATGGCTGCTGTTTCCCCTGCTGCCGCTAGGGCCGAGCCAGGCCAATGGAA
GAAGAACCTCTCAGCCCACGTCATTTGCCCCGAGTGCAAAGAGGTTCCCC
CGAATCTGGAGTTCCCTGGCTCTCACGAAACTGTTTGCGGCTCATGTGGT
CTGGTTCTCGCTGATCGGGAGATTGACATGCACTCAGAATGGCGTACATT
CTCCAATGACGATCAGAACAACGACGACCCTTCTCGTGTTGGAGATGCCA
TGAACCCGCTTCTCAACGGTGATCAACTAGAGACCCAGATTGCTAGTGGT
GGGTCGGGCCGCGTTCGCGACCTTTACCGTGCTCAGAACAAACAATCGAG
TGAAAAGGCAAACAAGGCTCTTCTGGCAGCCTACAAGGAAATTGGTGCTC
TTTGCGATGGTTTTAACATTCAGAAGAACGTGGCAGACACAGCGAAGTAT
CTCTTCAAGATTGTGGACGATGCCAAGGCATTCAAGGGAAAGTCCCAGGA
TGTGATCATTGCAGGCTGTATATTTATCGCCTGTCGCCAGTGCAAGGTGC
CACGTACCTTCACTGAGATCTTCGCGGTGACCAAGGTCACAAGGAAGGAA
ATTGGGCGTATCTACAAAGCTCTGGAGAAGTTTTTCACTGCACAGAACCT
CGAGCGGATCAATGCCGTGGTCTCCAGCGGAGGTGTCCCTGATCCCAACG
ACACATACACCGCCACTACTTCCACCAAGCCTAGTGACCTTTGCAACCGT
TTCTGTAACCTTCTGGATCTGCCCTTCCAGGTTACCAGCGTCTCCTCTGC
TTTATCCGATCGCGTGACAACGATGGGAGATTTGGCCGGACGTTCTCCCC
TGTCCATCGTGGCAGCCTGCATCTACATGGCATCGTACCTGATGGGACAC
GGCAAGAGCGCCAAGGAGATATCCCAGGTGGCCCATGTCAGCGATGGTAC
GATCCGCGGTGCTTACAAGCAGCTATATGCTGAAAGAGAGCGCCTCATCG
ATCCCGAGTGGATCAAAGATGGGAAGGGTGACCTGAAGAACCTACCTAAC
AGTTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0017025TBP-class protein binding
Vocabulary: Biological Process
TermDefinition
GO:0006352DNA-templated transcription, initiation
GO:0070897transcription preinitiation complex assembly
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_001381ATCC10864_001381Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001381-T1.exon1ATCC10864_001381-T1.exon1Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001381-T1.cdsATCC10864_001381-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001381-T1ATCC10864_001381-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR013763
InterProIPR013150
InterProIPR036915
InterProIPR013137
InterProIPR023486
InterProIPR000812
PFAMPF08271
PFAMPF00382
Properties
Property NameValue
NoteBUSCO:EOG09262PAY
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000027supercontigMCQH01000027:224329..225384 +
Powered by Drupal