You are here

Home

ATCC10864_001434-T1, ATCC10864_001434-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_001434-T1
Unique NameATCC10864_001434-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000027:390482..391777+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_001434-T1 ID=ATCC10864_001434-T1|Name=ATCC10864_001434-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1296bp|location=Sequence derived from alignment at MCQH01000027:390482..391777+ (Aspergillus niger ATCC 10864)
ATGGCGCCTCTCGTTCCCTCGCAGGAGGAGCTTGATCGCAGAAGGGTATG
TTCCCTCTTCCGACCGTGGCTTCTTCTCTCTCTCTTACGTCCTTCATCAT
ACTGACTGCATTGACTTCCAGATCGTCGACATCAACCCAGAGACCGTCTC
CAACATCCCCTCCACAGATTTTCCTGGTCACTGGCCCGGCGAGTCGCACG
AATGGTCCCTCGCAAAGTTCAAGAATGTACGTTGGTAGTACTCAAGTGTC
CGCGCTCAATTGCCCCTCCTCCCAGTCAAGCTTCATCAGCTTTACGCTCA
CACATCTTTTTTTTTCGCGAACAGGATCTCAAGATCGACTTCCACCGCAA
CGAGCGATTCGAATCCTCCTTCTCTCTCATCGGAGTCGACGCCTCCATTG
CCAATGCCTTCCGTCGCATTCTCATGGCTGAGGTGCCCAGCATCGCCATC
GAATACGTCTTCGTCCACAACAACACCTCTGTCATTCAGGATGAGGTTCT
CGCACAACGTCTGGGTCTGATTCCCCTCAAGGGTTCCGTGGAGGGCATCA
ACTGGATGCGCTGGTTCAAGAAGCCTACCGACGACGATCCCAATGGCAGC
AGTCCCGCCGATTACAACACCATCGTCTTGCGCTTGGACGTCGAATGTAC
CAAGAACCCCAACGCGGATCCCGAGGAGACTGACCCCCGCAAACTCTACA
AGAATGCGCACGTCTACGCCAAAGATATCACATTCCACCCCGTCGGTCGC
CAGGAACAGTTCTTTGCTGGCGATGACGCAATTCAGCCCGTCAACCCGGA
CATCCTGGTCGCCAAGCTTCGTCCCGGTCAGGCGATTGAAATGGAACTTC
ACTGTATCAAGGGTATCGGTGCCGACCATGCCAAGTTCTCCCCTGTCGCC
ACGGCCACCTACCGTCTACTACCCGACATCAAGATCCTCCGCCCCATCAT
CGGTGATGATGCCAAGAAGTTTGCCAAGTGCTTCCCCAGCGGTGTCATTG
GCCTCGAGAAGGTCACTCGTGAGGAGGCCAAGCAGAAGGACAGCGGATAT
GAGGGCCACGAGGGCGAATTGAAGGCAGTTGTTGTGGATCCCTTCAAGGA
TACCGTCAGCAGAGAGTGTCTGAGACACGAGGAGTTCCAGGGCAAGGTCA
AGCTCGGTCGCGTCCGCGACCACTTCATCTTCAACATCGAGAGTGTTGGC
CAATTCGAAAGCGACACCCTCTTCCTGGAGAGCGTCAAGGTGCTGAAGCT
GAAATGCGCAAGATGGAAGCGCGGCTTGACGGACCTTATGCGCTAA
back to top

Coding sequence (CDS) from alignment at MCQH01000027:390482..391777+

>ATCC10864_001434-T1 ID=ATCC10864_001434-T1|Name=ATCC10864_001434-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=3366bp|location=Sequence derived from alignment at MCQH01000027:390482..391777+ (Aspergillus niger ATCC 10864)
ATGGCGCCTCTCGTTCCCTCGCAGGAGGAGCTTGATCGCAGAAGGATCGT
CGACATCAACCCAGAGACCGTCTCCAACATCCCCTCCACAGATTTTCCTG
GTCACTGGCCCGGCGAGTCGCACGAATGGTCCCTCGCAAAGTTCAAGAAT
GATCTCAAGATCGACTTCCACCGCAACGAGCGATTCGAATCCTCCTTCTC
TCTCATCGGAGTCGACGCCTCCATTGCCAATGCCTTCCGTCGCATTCTCA
TGGCTGAGGTGCCCAGCATCGCCATCGAATACGTCTTCGTCCACAACAAC
ACCTCTGTCATTCAGGATGAGGTTCTCGCACAACGTCTGGGTCTGATTCC
CCTCAAGGGTTCCGTGGAGGGCATCAACTGGATGCGCTGGTTCAAGAAGC
CTACCGACGACGATCCCAATGGCAGCAGTCCCGCCGATTACAACACCATC
GTCTTGCGCTTGGACGTCGAATGTACCAAGAACCCCAACGCGGATCCCGA
GGAGACTGACCCCCGCAAACTCTACAAGAATGCGCACGTCTACGCCAAAG
ATATCACATTCCACCCCGTCGGTCGCCAGGAACAGTTCTTTGCTGGCGAT
GACGCAATTCAGCCCGTCAACCCGGACATCCTGGTCGCCAAGCTTCGTCC
CGGTCAGGCGATTGAAATGGAACTTCACTGTATCAAGGGTATCGGTGCCG
ACCATGCCAAGTTCTCCCCTGTCGCCACGGCCACCTACCGTCTACTACCC
GACATCAAGATCCTCCGCCCCATCATCGGTGATGATGCCAAGAAGTTTGC
CAAGTGCTTCCCCAGCGGTGTCATTGGCCTCGAGAAGGTCACTCGTGAGG
AGGCCAAGCAGAAGGACAGCGGATATGAGGGCCACGAGGGCGAATTGAAG
GCAGTTGTTGTGGATCCCTTCAAGGATACCGTCAGCAGAGAGTGTCTGAG
ACACGAGGAGTTCCAGGGCAAGGTCAAGCTCGGTCGCGTCCGCGACCACT
TCATCTTCAACATCGAGAGTGTTGGCCAATTCGAAAGCGACACCCTCTTC
CTGGAGAGCGTCAAGGTGCTGAAGCTGAAATGCGCAAGATGGAAGCGCGG
CTTGACGGACCTTATGCGCTAAATGGCGCCTCTCGTTCCCTCGCAGGAGG
AGCTTGATCGCAGAAGGATCGTCGACATCAACCCAGAGACCGTCTCCAAC
ATCCCCTCCACAGATTTTCCTGGTCACTGGCCCGGCGAGTCGCACGAATG
GTCCCTCGCAAAGTTCAAGAATGATCTCAAGATCGACTTCCACCGCAACG
AGCGATTCGAATCCTCCTTCTCTCTCATCGGAGTCGACGCCTCCATTGCC
AATGCCTTCCGTCGCATTCTCATGGCTGAGGTGCCCAGCATCGCCATCGA
ATACGTCTTCGTCCACAACAACACCTCTGTCATTCAGGATGAGGTTCTCG
CACAACGTCTGGGTCTGATTCCCCTCAAGGGTTCCGTGGAGGGCATCAAC
TGGATGCGCTGGTTCAAGAAGCCTACCGACGACGATCCCAATGGCAGCAG
TCCCGCCGATTACAACACCATCGTCTTGCGCTTGGACGTCGAATGTACCA
AGAACCCCAACGCGGATCCCGAGGAGACTGACCCCCGCAAACTCTACAAG
AATGCGCACGTCTACGCCAAAGATATCACATTCCACCCCGTCGGTCGCCA
GGAACAGTTCTTTGCTGGCGATGACGCAATTCAGCCCGTCAACCCGGACA
TCCTGGTCGCCAAGCTTCGTCCCGGTCAGGCGATTGAAATGGAACTTCAC
TGTATCAAGGGTATCGGTGCCGACCATGCCAAGTTCTCCCCTGTCGCCAC
GGCCACCTACCGTCTACTACCCGACATCAAGATCCTCCGCCCCATCATCG
GTGATGATGCCAAGAAGTTTGCCAAGTGCTTCCCCAGCGGTGTCATTGGC
CTCGAGAAGGTCACTCGTGAGGAGGCCAAGCAGAAGGACAGCGGATATGA
GGGCCACGAGGGCGAATTGAAGGCAGTTGTTGTGGATCCCTTCAAGGATA
CCGTCAGCAGAGAGTGTCTGAGACACGAGGAGTTCCAGGGCAAGGTCAAG
CTCGGTCGCGTCCGCGACCACTTCATCTTCAACATCGAGAGTGTTGGCCA
ATTCGAAAGCGACACCCTCTTCCTGGAGAGCGTCAAGGTGCTGAAGCTGA
AATGCGCAAGATGGAAGCGCGGCTTGACGGACCTTATGCGCTAAATGGCG
CCTCTCGTTCCCTCGCAGGAGGAGCTTGATCGCAGAAGGATCGTCGACAT
CAACCCAGAGACCGTCTCCAACATCCCCTCCACAGATTTTCCTGGTCACT
GGCCCGGCGAGTCGCACGAATGGTCCCTCGCAAAGTTCAAGAATGATCTC
AAGATCGACTTCCACCGCAACGAGCGATTCGAATCCTCCTTCTCTCTCAT
CGGAGTCGACGCCTCCATTGCCAATGCCTTCCGTCGCATTCTCATGGCTG
AGGTGCCCAGCATCGCCATCGAATACGTCTTCGTCCACAACAACACCTCT
GTCATTCAGGATGAGGTTCTCGCACAACGTCTGGGTCTGATTCCCCTCAA
GGGTTCCGTGGAGGGCATCAACTGGATGCGCTGGTTCAAGAAGCCTACCG
ACGACGATCCCAATGGCAGCAGTCCCGCCGATTACAACACCATCGTCTTG
CGCTTGGACGTCGAATGTACCAAGAACCCCAACGCGGATCCCGAGGAGAC
TGACCCCCGCAAACTCTACAAGAATGCGCACGTCTACGCCAAAGATATCA
CATTCCACCCCGTCGGTCGCCAGGAACAGTTCTTTGCTGGCGATGACGCA
ATTCAGCCCGTCAACCCGGACATCCTGGTCGCCAAGCTTCGTCCCGGTCA
GGCGATTGAAATGGAACTTCACTGTATCAAGGGTATCGGTGCCGACCATG
CCAAGTTCTCCCCTGTCGCCACGGCCACCTACCGTCTACTACCCGACATC
AAGATCCTCCGCCCCATCATCGGTGATGATGCCAAGAAGTTTGCCAAGTG
CTTCCCCAGCGGTGTCATTGGCCTCGAGAAGGTCACTCGTGAGGAGGCCA
AGCAGAAGGACAGCGGATATGAGGGCCACGAGGGCGAATTGAAGGCAGTT
GTTGTGGATCCCTTCAAGGATACCGTCAGCAGAGAGTGTCTGAGACACGA
GGAGTTCCAGGGCAAGGTCAAGCTCGGTCGCGTCCGCGACCACTTCATCT
TCAACATCGAGAGTGTTGGCCAATTCGAAAGCGACACCCTCTTCCTGGAG
AGCGTCAAGGTGCTGAAGCTGAAATGCGCAAGATGGAAGCGCGGCTTGAC
GGACCTTATGCGCTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0001054RNA polymerase I activity
GO:0003899DNA-directed 5'-3' RNA polymerase activity
GO:0046983protein dimerization activity
GO:0001056RNA polymerase III activity
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_001434ATCC10864_001434Aspergillus niger ATCC 10864gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001434-T1.exon1ATCC10864_001434-T1.exon1Aspergillus niger ATCC 10864exon
ATCC10864_001434-T1.exon2ATCC10864_001434-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_001434-T1.exon3ATCC10864_001434-T1.exon3Aspergillus niger ATCC 10864exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001434-T1.cdsATCC10864_001434-T1.cdsAspergillus niger ATCC 10864CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001434-T1ATCC10864_001434-T1-proteinAspergillus niger ATCC 10864polypeptide


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR036643
InterProIPR033901
PFAMPF01000
InterProIPR001514
InterProIPR011263
PFAMPF01193
InterProIPR036603
InterProIPR011262
Properties
Property NameValue
NoteBUSCO:EOG09263CLY
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000027supercontigMCQH01000027:390482..391777 +
Powered by Drupal