You are here

Home

ATCC10864_001473-T1, ATCC10864_001473-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_001473-T1
Unique NameATCC10864_001473-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000027:533909..535988-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_001473-T1 ID=ATCC10864_001473-T1|Name=ATCC10864_001473-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=2080bp|location=Sequence derived from alignment at MCQH01000027:533909..535988- (Aspergillus niger ATCC 10864)
ATGACGTCCGCTTCCGACCTCGCTGTCTCCGTCGAGGGACTCTCCATCCA
GTCGACCTCCGAGACCTCCAAGTTCCCCAACTGCTTCCCCTCCCTGAACC
CCGTCGACGTTTACAGAGAGCACATTGCGGAGGAGCTTGCCAAGATCACC
GGTCTGGACGCGGAGAAGATCTTCTCCCGTATCGCATGGACGAACTCGTT
GGACAAGGGTGACCTGGTGTTGCCGGTACGCGACCATCATAAAAACACAA
TTGGATTGGATTTTGTTGGGCCACATGACACCGACTAATGGAGCATGTTA
TCTCTAGGTCCCCTCTCTTCAGATCAAGAAGAACCCCCAGGAGCTGTGCA
AGGAACTCGTCGAGAAGTTCCCCGAGTCCGACCTCATCCTCCCCCCCGTT
GCCTTCGGTCCTCACATGCAGTTCTTCTTCCGGCCGGAACGTCTCACCAC
CAACGTCGTTAGCCGTATCTTGAAGGAGAAGTCTGCCTTTGGTACCAATG
GCAACGTTGGTCTGCGCGACCCCGCTGACCCCTCCAAGGGTCGCAAGCGG
ATCATCGTCGAGTTCTCGTCTCCCAACATCGCCAAGCCCTTCCATGCTGG
TCACCTGCGCAGTACCATCATCGGTGGTTTCCTTGCCAACCTCTACACGG
TCATGGGATGGGACGTCATCAAGATGAACTACCTTGGTGATTGGGGTAAG
CAGTACGGTCTGCTTGCCAATGGTTTCAAGATGTTCGGTAGCGAGGAGGA
GCTGACCAAGGACCCCATCAACCACCTGTTCAACGTCTACGTCAAGATCA
ACGGCATTGTCTCCGAGCAGGAGGGCCCCATCAAGGAGCTCAAGGAGCAG
ATCAAGGCCAAGAAGGAGAAGGGCGAGGACGCCGCCGAGCAAGAGAAGGA
GCTTGCCAAGCTTGTTGATGCCAGTGAGGACGAGAACGCCCGCCGTTACT
TCAAGAGCATGGAGGATGGTAACCAGGAGGCTCTTGCTCTCTGGCGCCGG
TTCCGTGAGCTCAGTATCGAGAAGTACAGACAGACCTATGCTCGTTTGAA
CATTGACTTTGACGTCTACTCTGGAGAGTCTCAGATCAAGCAGGAGAGCA
TGACCTCCGCTTACGAGACCATGGAGAAGGTCGGCGTGTCCGAGAAGTCC
GAAGGTGCTGTCATCGTCGACTTCACCAAGCACGGCGCCAAGAAGCTTGG
AAAGGCCATCATTGTCCGCAAGGACGGCACTCCTCTCTACCTGACCCGTG
ATATTGGTGCCATCCTCGAGCGTGAGGAGGCCTACAAGTTTGACAAGATG
ATCTACGTCGTTGCCGCTCAGCAGGACCTCCACTTGGCTCAGCTGTTCAA
GATCACTGAACTCATGGGCTACAAGGATCTGGCCAGCCGCTGCCAGCACA
TCAACTTCGGTATGGTGCGCGGTATGAGCACCCGTAAGGGTACTGTCAAG
TTCTTGGACGACATCCTCCAGGATGTCCGTGACAAGATGCACGAAGTCAT
GAAGAAGAACACCGAGAAGTACGAGCAGGTCGCCGACCCTGAGGGCACTG
CTGACATCCTGGGTATGTCCTCCGTCATGGTTCAGGACATGACCGGAAAG
CGGTACGTACATCCCTTTGCCCCATGATAGCCTCTCAATTTGCTAACGAA
ACACAGTATCAACGGCTATGACTTCAACCTGGATGCCATGACCTCTTTCG
AGGGTGACACCGGTCCTTACCTGCAATACGCTCACGCCCGTCTCTGCTCC
ATTGTGCGCAAGTCCGGCCTGAACGTCGACGAGCTCGACACGGCCAACCT
GAGCCTCCTGACCGAGACCCACGCTACCGACCTTGCTCGTCTGCTCGCCC
AGTGGCCCGATGTGCTGCTCAACACGACCCGCACCCTGGAGCCCACTACT
ATCCTCACCTACCTGTTCCGCATGACCCACGTGCTTAGCTCCAGCTACGA
TGTGCTCAAGGTTGTTGGTAGCGAGCCTGAGCTCAAGAAGGCCCGTATGG
CTCTGTACGAGTCCGCCCGCCAGGTGCTGCACAACGGTATGCGCATCCTG
GGTCTCAGCCCTGTCAACCGGTACGTTTAG
back to top

Coding sequence (CDS) from alignment at MCQH01000027:533909..535988-

>ATCC10864_001473-T1 ID=ATCC10864_001473-T1|Name=ATCC10864_001473-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=5832bp|location=Sequence derived from alignment at MCQH01000027:533909..535988- (Aspergillus niger ATCC 10864)
TATCAACGGCTATGACTTCAACCTGGATGCCATGACCTCTTTCGAGGGTG
ACACCGGTCCTTACCTGCAATACGCTCACGCCCGTCTCTGCTCCATTGTG
CGCAAGTCCGGCCTGAACGTCGACGAGCTCGACACGGCCAACCTGAGCCT
CCTGACCGAGACCCACGCTACCGACCTTGCTCGTCTGCTCGCCCAGTGGC
CCGATGTGCTGCTCAACACGACCCGCACCCTGGAGCCCACTACTATCCTC
ACCTACCTGTTCCGCATGACCCACGTGCTTAGCTCCAGCTACGATGTGCT
CAAGGTTGTTGGTAGCGAGCCTGAGCTCAAGAAGGCCCGTATGGCTCTGT
ACGAGTCCGCCCGCCAGGTGCTGCACAACGGTATGCGCATCCTGGGTCTC
AGCCCTGTCAACCGGTACGTTTAGGTCCCCTCTCTTCAGATCAAGAAGAA
CCCCCAGGAGCTGTGCAAGGAACTCGTCGAGAAGTTCCCCGAGTCCGACC
TCATCCTCCCCCCCGTTGCCTTCGGTCCTCACATGCAGTTCTTCTTCCGG
CCGGAACGTCTCACCACCAACGTCGTTAGCCGTATCTTGAAGGAGAAGTC
TGCCTTTGGTACCAATGGCAACGTTGGTCTGCGCGACCCCGCTGACCCCT
CCAAGGGTCGCAAGCGGATCATCGTCGAGTTCTCGTCTCCCAACATCGCC
AAGCCCTTCCATGCTGGTCACCTGCGCAGTACCATCATCGGTGGTTTCCT
TGCCAACCTCTACACGGTCATGGGATGGGACGTCATCAAGATGAACTACC
TTGGTGATTGGGGTAAGCAGTACGGTCTGCTTGCCAATGGTTTCAAGATG
TTCGGTAGCGAGGAGGAGCTGACCAAGGACCCCATCAACCACCTGTTCAA
CGTCTACGTCAAGATCAACGGCATTGTCTCCGAGCAGGAGGGCCCCATCA
AGGAGCTCAAGGAGCAGATCAAGGCCAAGAAGGAGAAGGGCGAGGACGCC
GCCGAGCAAGAGAAGGAGCTTGCCAAGCTTGTTGATGCCAGTGAGGACGA
GAACGCCCGCCGTTACTTCAAGAGCATGGAGGATGGTAACCAGGAGGCTC
TTGCTCTCTGGCGCCGGTTCCGTGAGCTCAGTATCGAGAAGTACAGACAG
ACCTATGCTCGTTTGAACATTGACTTTGACGTCTACTCTGGAGAGTCTCA
GATCAAGCAGGAGAGCATGACCTCCGCTTACGAGACCATGGAGAAGGTCG
GCGTGTCCGAGAAGTCCGAAGGTGCTGTCATCGTCGACTTCACCAAGCAC
GGCGCCAAGAAGCTTGGAAAGGCCATCATTGTCCGCAAGGACGGCACTCC
TCTCTACCTGACCCGTGATATTGGTGCCATCCTCGAGCGTGAGGAGGCCT
ACAAGTTTGACAAGATGATCTACGTCGTTGCCGCTCAGCAGGACCTCCAC
TTGGCTCAGCTGTTCAAGATCACTGAACTCATGGGCTACAAGGATCTGGC
CAGCCGCTGCCAGCACATCAACTTCGGTATGGTGCGCGGTATGAGCACCC
GTAAGGGTACTGTCAAGTTCTTGGACGACATCCTCCAGGATGTCCGTGAC
AAGATGCACGAAGTCATGAAGAAGAACACCGAGAAGTACGAGCAGGTCGC
CGACCCTGAGGGCACTGCTGACATCCTGGGTATGTCCTCCGTCATGGTTC
AGGACATGACCGGAAAGCGATGACGTCCGCTTCCGACCTCGCTGTCTCCG
TCGAGGGACTCTCCATCCAGTCGACCTCCGAGACCTCCAAGTTCCCCAAC
TGCTTCCCCTCCCTGAACCCCGTCGACGTTTACAGAGAGCACATTGCGGA
GGAGCTTGCCAAGATCACCGGTCTGGACGCGGAGAAGATCTTCTCCCGTA
TCGCATGGACGAACTCGTTGGACAAGGGTGACCTGGTGTTGCCGTATCAA
CGGCTATGACTTCAACCTGGATGCCATGACCTCTTTCGAGGGTGACACCG
GTCCTTACCTGCAATACGCTCACGCCCGTCTCTGCTCCATTGTGCGCAAG
TCCGGCCTGAACGTCGACGAGCTCGACACGGCCAACCTGAGCCTCCTGAC
CGAGACCCACGCTACCGACCTTGCTCGTCTGCTCGCCCAGTGGCCCGATG
TGCTGCTCAACACGACCCGCACCCTGGAGCCCACTACTATCCTCACCTAC
CTGTTCCGCATGACCCACGTGCTTAGCTCCAGCTACGATGTGCTCAAGGT
TGTTGGTAGCGAGCCTGAGCTCAAGAAGGCCCGTATGGCTCTGTACGAGT
CCGCCCGCCAGGTGCTGCACAACGGTATGCGCATCCTGGGTCTCAGCCCT
GTCAACCGGTACGTTTAGGTCCCCTCTCTTCAGATCAAGAAGAACCCCCA
GGAGCTGTGCAAGGAACTCGTCGAGAAGTTCCCCGAGTCCGACCTCATCC
TCCCCCCCGTTGCCTTCGGTCCTCACATGCAGTTCTTCTTCCGGCCGGAA
CGTCTCACCACCAACGTCGTTAGCCGTATCTTGAAGGAGAAGTCTGCCTT
TGGTACCAATGGCAACGTTGGTCTGCGCGACCCCGCTGACCCCTCCAAGG
GTCGCAAGCGGATCATCGTCGAGTTCTCGTCTCCCAACATCGCCAAGCCC
TTCCATGCTGGTCACCTGCGCAGTACCATCATCGGTGGTTTCCTTGCCAA
CCTCTACACGGTCATGGGATGGGACGTCATCAAGATGAACTACCTTGGTG
ATTGGGGTAAGCAGTACGGTCTGCTTGCCAATGGTTTCAAGATGTTCGGT
AGCGAGGAGGAGCTGACCAAGGACCCCATCAACCACCTGTTCAACGTCTA
CGTCAAGATCAACGGCATTGTCTCCGAGCAGGAGGGCCCCATCAAGGAGC
TCAAGGAGCAGATCAAGGCCAAGAAGGAGAAGGGCGAGGACGCCGCCGAG
CAAGAGAAGGAGCTTGCCAAGCTTGTTGATGCCAGTGAGGACGAGAACGC
CCGCCGTTACTTCAAGAGCATGGAGGATGGTAACCAGGAGGCTCTTGCTC
TCTGGCGCCGGTTCCGTGAGCTCAGTATCGAGAAGTACAGACAGACCTAT
GCTCGTTTGAACATTGACTTTGACGTCTACTCTGGAGAGTCTCAGATCAA
GCAGGAGAGCATGACCTCCGCTTACGAGACCATGGAGAAGGTCGGCGTGT
CCGAGAAGTCCGAAGGTGCTGTCATCGTCGACTTCACCAAGCACGGCGCC
AAGAAGCTTGGAAAGGCCATCATTGTCCGCAAGGACGGCACTCCTCTCTA
CCTGACCCGTGATATTGGTGCCATCCTCGAGCGTGAGGAGGCCTACAAGT
TTGACAAGATGATCTACGTCGTTGCCGCTCAGCAGGACCTCCACTTGGCT
CAGCTGTTCAAGATCACTGAACTCATGGGCTACAAGGATCTGGCCAGCCG
CTGCCAGCACATCAACTTCGGTATGGTGCGCGGTATGAGCACCCGTAAGG
GTACTGTCAAGTTCTTGGACGACATCCTCCAGGATGTCCGTGACAAGATG
CACGAAGTCATGAAGAAGAACACCGAGAAGTACGAGCAGGTCGCCGACCC
TGAGGGCACTGCTGACATCCTGGGTATGTCCTCCGTCATGGTTCAGGACA
TGACCGGAAAGCGATGACGTCCGCTTCCGACCTCGCTGTCTCCGTCGAGG
GACTCTCCATCCAGTCGACCTCCGAGACCTCCAAGTTCCCCAACTGCTTC
CCCTCCCTGAACCCCGTCGACGTTTACAGAGAGCACATTGCGGAGGAGCT
TGCCAAGATCACCGGTCTGGACGCGGAGAAGATCTTCTCCCGTATCGCAT
GGACGAACTCGTTGGACAAGGGTGACCTGGTGTTGCCGTATCAACGGCTA
TGACTTCAACCTGGATGCCATGACCTCTTTCGAGGGTGACACCGGTCCTT
ACCTGCAATACGCTCACGCCCGTCTCTGCTCCATTGTGCGCAAGTCCGGC
CTGAACGTCGACGAGCTCGACACGGCCAACCTGAGCCTCCTGACCGAGAC
CCACGCTACCGACCTTGCTCGTCTGCTCGCCCAGTGGCCCGATGTGCTGC
TCAACACGACCCGCACCCTGGAGCCCACTACTATCCTCACCTACCTGTTC
CGCATGACCCACGTGCTTAGCTCCAGCTACGATGTGCTCAAGGTTGTTGG
TAGCGAGCCTGAGCTCAAGAAGGCCCGTATGGCTCTGTACGAGTCCGCCC
GCCAGGTGCTGCACAACGGTATGCGCATCCTGGGTCTCAGCCCTGTCAAC
CGGTACGTTTAGGTCCCCTCTCTTCAGATCAAGAAGAACCCCCAGGAGCT
GTGCAAGGAACTCGTCGAGAAGTTCCCCGAGTCCGACCTCATCCTCCCCC
CCGTTGCCTTCGGTCCTCACATGCAGTTCTTCTTCCGGCCGGAACGTCTC
ACCACCAACGTCGTTAGCCGTATCTTGAAGGAGAAGTCTGCCTTTGGTAC
CAATGGCAACGTTGGTCTGCGCGACCCCGCTGACCCCTCCAAGGGTCGCA
AGCGGATCATCGTCGAGTTCTCGTCTCCCAACATCGCCAAGCCCTTCCAT
GCTGGTCACCTGCGCAGTACCATCATCGGTGGTTTCCTTGCCAACCTCTA
CACGGTCATGGGATGGGACGTCATCAAGATGAACTACCTTGGTGATTGGG
GTAAGCAGTACGGTCTGCTTGCCAATGGTTTCAAGATGTTCGGTAGCGAG
GAGGAGCTGACCAAGGACCCCATCAACCACCTGTTCAACGTCTACGTCAA
GATCAACGGCATTGTCTCCGAGCAGGAGGGCCCCATCAAGGAGCTCAAGG
AGCAGATCAAGGCCAAGAAGGAGAAGGGCGAGGACGCCGCCGAGCAAGAG
AAGGAGCTTGCCAAGCTTGTTGATGCCAGTGAGGACGAGAACGCCCGCCG
TTACTTCAAGAGCATGGAGGATGGTAACCAGGAGGCTCTTGCTCTCTGGC
GCCGGTTCCGTGAGCTCAGTATCGAGAAGTACAGACAGACCTATGCTCGT
TTGAACATTGACTTTGACGTCTACTCTGGAGAGTCTCAGATCAAGCAGGA
GAGCATGACCTCCGCTTACGAGACCATGGAGAAGGTCGGCGTGTCCGAGA
AGTCCGAAGGTGCTGTCATCGTCGACTTCACCAAGCACGGCGCCAAGAAG
CTTGGAAAGGCCATCATTGTCCGCAAGGACGGCACTCCTCTCTACCTGAC
CCGTGATATTGGTGCCATCCTCGAGCGTGAGGAGGCCTACAAGTTTGACA
AGATGATCTACGTCGTTGCCGCTCAGCAGGACCTCCACTTGGCTCAGCTG
TTCAAGATCACTGAACTCATGGGCTACAAGGATCTGGCCAGCCGCTGCCA
GCACATCAACTTCGGTATGGTGCGCGGTATGAGCACCCGTAAGGGTACTG
TCAAGTTCTTGGACGACATCCTCCAGGATGTCCGTGACAAGATGCACGAA
GTCATGAAGAAGAACACCGAGAAGTACGAGCAGGTCGCCGACCCTGAGGG
CACTGCTGACATCCTGGGTATGTCCTCCGTCATGGTTCAGGACATGACCG
GAAAGCGATGACGTCCGCTTCCGACCTCGCTGTCTCCGTCGAGGGACTCT
CCATCCAGTCGACCTCCGAGACCTCCAAGTTCCCCAACTGCTTCCCCTCC
CTGAACCCCGTCGACGTTTACAGAGAGCACATTGCGGAGGAGCTTGCCAA
GATCACCGGTCTGGACGCGGAGAAGATCTTCTCCCGTATCGCATGGACGA
ACTCGTTGGACAAGGGTGACCTGGTGTTGCCG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0005524ATP binding
GO:0004812aminoacyl-tRNA ligase activity
GO:0004814arginine-tRNA ligase activity
Vocabulary: Biological Process
TermDefinition
GO:0006420arginyl-tRNA aminoacylation
GO:0006418tRNA aminoacylation for protein translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_001473ATCC10864_001473Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001473-T1ATCC10864_001473-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001473-T1.cdsATCC10864_001473-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001473-T1.exon3ATCC10864_001473-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_001473-T1.exon2ATCC10864_001473-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_001473-T1.exon1ATCC10864_001473-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR001412
InterProIPR014729
PFAMPF05746
PFAMPF03485
InterProIPR001278
InterProIPR009080
PFAMPF00750
InterProIPR035684
InterProIPR005148
InterProIPR036695
InterProIPR008909
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000027supercontigMCQH01000027:533909..535988 -
Powered by Drupal