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Sequences
The following sequences are available for this feature:
mRNA from alignment at MCQH01000027:577689..579184- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ATCC10864_001489-T1 ID=ATCC10864_001489-T1|Name=ATCC10864_001489-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1496bp|location=Sequence derived from alignment at MCQH01000027:577689..579184- (Aspergillus niger ATCC 10864)
ATGTCTTCTGCTCCTGACGGGCAACCAATGCTGCCTCTTCCTGGAGCCCC
GTCTTCTTCATGGTCCCGATTTCGTGAGAGATTCGGTGCACTTTTTCATG
GCGCTGACCCCAGAGTCTGTGTTGCATTCTGGCTACTTGGTAAGCCGTTG
GCCGTCTTGTAGACACCGCGAACTGATAAGAACTATTCGTGGCTCACTGA
CCGGCATGCGTGACTCGCAACAGGATTGATCAACAATGTCCTCTATGTTA
TCATTTTGTCCGCAGCCCTCGATTTAGTTGGTCCTAGTGTCCCCAAGGGC
GTTGTTCTTCTCGCAGACGTCATTCCCTCATTCGGAACCAAGCTGATAGC
ACCCTACTTTATTCATTTGGTTCCATATCCCGCTCGAGTATTGTTCTGTG
TGCTATGTTCAGCCGTGGGTATGCTTCTGGTGGCCCTGAGCCCAGCGTAT
ACAGATGGCGGTTCAATTTCCACCAAAATCGCGGGCATTATTCTGGCGAG
CTTGTCGAGCGGAGGAGGCGAACTGAGCTTCCTGGCACTGACGCACTTCT
ACGGCCCGTTCAGTCTGGCAGCCTGGGGTAGTGGTACCGGAGCCGCCGGG
CTGGTCGGTGCTGGTGCGTACGCTGTCGCAACTACCTCTATGGGGCTCAG
TGTCAAGTCGACACTCCTAGCAGCTGCCTGCTTGCCAGCAATCATGGTTG
TGAGCTTCTTCGCCATTCTGCCAAGAGCTCCCATACGGACATTGGCCGCT
GCACCTGTTGAGTATCGTGCAATTGACCAGGAAGATCGGGATGACCTTCT
GGATGAGCGGCACGGTCTACTCGGCTCCTCAGCTCCCCCGAGCCGAAACA
AGAGGAGCGACGCGAGTCATGAGCTCGGCTTGCAGGTGTTCAAAGCTAAC
CTGCAGCGAGCTAGAGGACTTTTCTTTCCCTTGTAAGTGCACGCTAGTAT
CATCAAGCAATAATTGGCATGCTTACATTTCCGCGCAGCATGCTCCCCCT
TCTGCTAGTCTATGTGGCCGAATACACAATCAACCAAGGGGTTTCTCCGA
CTCTGCTGTTTCCACTTAAAGATTCGCCGTTTGAACATTATCGTGCATTT
TATCCCGCGTACAATGCGATCTATCAGGTTGGTGTTTTCATCTCGCGATC
GTCCACCCCTTTCTTTCGGATTCACGATCTTTACCTTCCGTCACTGCTGC
AAATCATCAGTTTGGTCGTATTGACATTGCACGCCTTGTTTGACTTCATC
CCGAGCGTGTACATAATATTTATAGTCATCTTCTGGGAAGGGCTATTAGG
GGGGCTGGTTTATGTCAATACATTCGCCGAAATCGGGGACCGGGTGCCGA
AGGAAGACCGAGAATTCTCGCTCGGAGCGACGACTGTCAGCGATTCTGCC
GGAATTTGTATAGCGGGCTTTCTGGGAATGGCGTTTGAGGTCTGGTTGTG
TGATTGGCAGGTCGCCCACGGTCGGGATTATTGCCGGAAACTATGA back to topCoding sequence (CDS) from alignment at MCQH01000027:577689..579184- >ATCC10864_001489-T1 ID=ATCC10864_001489-T1|Name=ATCC10864_001489-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=4068bp|location=Sequence derived from alignment at MCQH01000027:577689..579184- (Aspergillus niger ATCC 10864)
CATGCTCCCCCTTCTGCTAGTCTATGTGGCCGAATACACAATCAACCAAG
GGGTTTCTCCGACTCTGCTGTTTCCACTTAAAGATTCGCCGTTTGAACAT
TATCGTGCATTTTATCCCGCGTACAATGCGATCTATCAGGTTGGTGTTTT
CATCTCGCGATCGTCCACCCCTTTCTTTCGGATTCACGATCTTTACCTTC
CGTCACTGCTGCAAATCATCAGTTTGGTCGTATTGACATTGCACGCCTTG
TTTGACTTCATCCCGAGCGTGTACATAATATTTATAGTCATCTTCTGGGA
AGGGCTATTAGGGGGGCTGGTTTATGTCAATACATTCGCCGAAATCGGGG
ACCGGGTGCCGAAGGAAGACCGAGAATTCTCGCTCGGAGCGACGACTGTC
AGCGATTCTGCCGGAATTTGTATAGCGGGCTTTCTGGGAATGGCGTTTGA
GGTCTGGTTGTGTGATTGGCAGGTCGCCCACGGTCGGGATTATTGCCGGA
AACTATGAGATTGATCAACAATGTCCTCTATGTTATCATTTTGTCCGCAG
CCCTCGATTTAGTTGGTCCTAGTGTCCCCAAGGGCGTTGTTCTTCTCGCA
GACGTCATTCCCTCATTCGGAACCAAGCTGATAGCACCCTACTTTATTCA
TTTGGTTCCATATCCCGCTCGAGTATTGTTCTGTGTGCTATGTTCAGCCG
TGGGTATGCTTCTGGTGGCCCTGAGCCCAGCGTATACAGATGGCGGTTCA
ATTTCCACCAAAATCGCGGGCATTATTCTGGCGAGCTTGTCGAGCGGAGG
AGGCGAACTGAGCTTCCTGGCACTGACGCACTTCTACGGCCCGTTCAGTC
TGGCAGCCTGGGGTAGTGGTACCGGAGCCGCCGGGCTGGTCGGTGCTGGT
GCGTACGCTGTCGCAACTACCTCTATGGGGCTCAGTGTCAAGTCGACACT
CCTAGCAGCTGCCTGCTTGCCAGCAATCATGGTTGTGAGCTTCTTCGCCA
TTCTGCCAAGAGCTCCCATACGGACATTGGCCGCTGCACCTGTTGAGTAT
CGTGCAATTGACCAGGAAGATCGGGATGACCTTCTGGATGAGCGGCACGG
TCTACTCGGCTCCTCAGCTCCCCCGAGCCGAAACAAGAGGAGCGACGCGA
GTCATGAGCTCGGCTTGCAGGTGTTCAAAGCTAACCTGCAGCGAGCTAGA
GGACTTTTCTTTCCCTTATGTCTTCTGCTCCTGACGGGCAACCAATGCTG
CCTCTTCCTGGAGCCCCGTCTTCTTCATGGTCCCGATTTCGTGAGAGATT
CGGTGCACTTTTTCATGGCGCTGACCCCAGAGTCTGTGTTGCATTCTGGC
TACTTGCATGCTCCCCCTTCTGCTAGTCTATGTGGCCGAATACACAATCA
ACCAAGGGGTTTCTCCGACTCTGCTGTTTCCACTTAAAGATTCGCCGTTT
GAACATTATCGTGCATTTTATCCCGCGTACAATGCGATCTATCAGGTTGG
TGTTTTCATCTCGCGATCGTCCACCCCTTTCTTTCGGATTCACGATCTTT
ACCTTCCGTCACTGCTGCAAATCATCAGTTTGGTCGTATTGACATTGCAC
GCCTTGTTTGACTTCATCCCGAGCGTGTACATAATATTTATAGTCATCTT
CTGGGAAGGGCTATTAGGGGGGCTGGTTTATGTCAATACATTCGCCGAAA
TCGGGGACCGGGTGCCGAAGGAAGACCGAGAATTCTCGCTCGGAGCGACG
ACTGTCAGCGATTCTGCCGGAATTTGTATAGCGGGCTTTCTGGGAATGGC
GTTTGAGGTCTGGTTGTGTGATTGGCAGGTCGCCCACGGTCGGGATTATT
GCCGGAAACTATGAGATTGATCAACAATGTCCTCTATGTTATCATTTTGT
CCGCAGCCCTCGATTTAGTTGGTCCTAGTGTCCCCAAGGGCGTTGTTCTT
CTCGCAGACGTCATTCCCTCATTCGGAACCAAGCTGATAGCACCCTACTT
TATTCATTTGGTTCCATATCCCGCTCGAGTATTGTTCTGTGTGCTATGTT
CAGCCGTGGGTATGCTTCTGGTGGCCCTGAGCCCAGCGTATACAGATGGC
GGTTCAATTTCCACCAAAATCGCGGGCATTATTCTGGCGAGCTTGTCGAG
CGGAGGAGGCGAACTGAGCTTCCTGGCACTGACGCACTTCTACGGCCCGT
TCAGTCTGGCAGCCTGGGGTAGTGGTACCGGAGCCGCCGGGCTGGTCGGT
GCTGGTGCGTACGCTGTCGCAACTACCTCTATGGGGCTCAGTGTCAAGTC
GACACTCCTAGCAGCTGCCTGCTTGCCAGCAATCATGGTTGTGAGCTTCT
TCGCCATTCTGCCAAGAGCTCCCATACGGACATTGGCCGCTGCACCTGTT
GAGTATCGTGCAATTGACCAGGAAGATCGGGATGACCTTCTGGATGAGCG
GCACGGTCTACTCGGCTCCTCAGCTCCCCCGAGCCGAAACAAGAGGAGCG
ACGCGAGTCATGAGCTCGGCTTGCAGGTGTTCAAAGCTAACCTGCAGCGA
GCTAGAGGACTTTTCTTTCCCTTATGTCTTCTGCTCCTGACGGGCAACCA
ATGCTGCCTCTTCCTGGAGCCCCGTCTTCTTCATGGTCCCGATTTCGTGA
GAGATTCGGTGCACTTTTTCATGGCGCTGACCCCAGAGTCTGTGTTGCAT
TCTGGCTACTTGCATGCTCCCCCTTCTGCTAGTCTATGTGGCCGAATACA
CAATCAACCAAGGGGTTTCTCCGACTCTGCTGTTTCCACTTAAAGATTCG
CCGTTTGAACATTATCGTGCATTTTATCCCGCGTACAATGCGATCTATCA
GGTTGGTGTTTTCATCTCGCGATCGTCCACCCCTTTCTTTCGGATTCACG
ATCTTTACCTTCCGTCACTGCTGCAAATCATCAGTTTGGTCGTATTGACA
TTGCACGCCTTGTTTGACTTCATCCCGAGCGTGTACATAATATTTATAGT
CATCTTCTGGGAAGGGCTATTAGGGGGGCTGGTTTATGTCAATACATTCG
CCGAAATCGGGGACCGGGTGCCGAAGGAAGACCGAGAATTCTCGCTCGGA
GCGACGACTGTCAGCGATTCTGCCGGAATTTGTATAGCGGGCTTTCTGGG
AATGGCGTTTGAGGTCTGGTTGTGTGATTGGCAGGTCGCCCACGGTCGGG
ATTATTGCCGGAAACTATGAGATTGATCAACAATGTCCTCTATGTTATCA
TTTTGTCCGCAGCCCTCGATTTAGTTGGTCCTAGTGTCCCCAAGGGCGTT
GTTCTTCTCGCAGACGTCATTCCCTCATTCGGAACCAAGCTGATAGCACC
CTACTTTATTCATTTGGTTCCATATCCCGCTCGAGTATTGTTCTGTGTGC
TATGTTCAGCCGTGGGTATGCTTCTGGTGGCCCTGAGCCCAGCGTATACA
GATGGCGGTTCAATTTCCACCAAAATCGCGGGCATTATTCTGGCGAGCTT
GTCGAGCGGAGGAGGCGAACTGAGCTTCCTGGCACTGACGCACTTCTACG
GCCCGTTCAGTCTGGCAGCCTGGGGTAGTGGTACCGGAGCCGCCGGGCTG
GTCGGTGCTGGTGCGTACGCTGTCGCAACTACCTCTATGGGGCTCAGTGT
CAAGTCGACACTCCTAGCAGCTGCCTGCTTGCCAGCAATCATGGTTGTGA
GCTTCTTCGCCATTCTGCCAAGAGCTCCCATACGGACATTGGCCGCTGCA
CCTGTTGAGTATCGTGCAATTGACCAGGAAGATCGGGATGACCTTCTGGA
TGAGCGGCACGGTCTACTCGGCTCCTCAGCTCCCCCGAGCCGAAACAAGA
GGAGCGACGCGAGTCATGAGCTCGGCTTGCAGGTGTTCAAAGCTAACCTG
CAGCGAGCTAGAGGACTTTTCTTTCCCTTATGTCTTCTGCTCCTGACGGG
CAACCAATGCTGCCTCTTCCTGGAGCCCCGTCTTCTTCATGGTCCCGATT
TCGTGAGAGATTCGGTGCACTTTTTCATGGCGCTGACCCCAGAGTCTGTG
TTGCATTCTGGCTACTTG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016020 | membrane |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Cross References
External references for this mRNA
| Database | Accession |
|---|
| InterPro | IPR036259 |
| InterPro | IPR003492 |
| InterPro | IPR018460 |
| PFAM | PF02487 |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09263C1V |
| Product | battenin CLN3 protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| MCQH01000027 | supercontig | MCQH01000027:577689..579184 - |
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