You are here

Home

ATCC10864_001492-T1, ATCC10864_001492-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_001492-T1
Unique NameATCC10864_001492-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000027:582891..584044-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_001492-T1 ID=ATCC10864_001492-T1|Name=ATCC10864_001492-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1154bp|location=Sequence derived from alignment at MCQH01000027:582891..584044- (Aspergillus niger ATCC 10864)
ATGATGACCTTCCGACCTCGAATGAGCCTCTTCTCTGCCCTTCGCACGGC
CCCAGCTCGACGCCGCTTTGCGACTGAGGCGCGGTTAACCACGGACCATG
TCCGCATCGTCGAAGTAGGGCCACGAGATGGTCTGCAGAACGAGAAAAAG
TCGATTCCACTTGAGACCAAGCTTCAGCTTATTGAGAAGCTTGCTAAGAC
AGGTGTAACCACAATTGAGGCGGGATCCTTTGTGCCGGCGAAATGGGTGC
CCCAGGTACGGACGTCTGCTTGCATCCGAAAGGAGGAGTAACGACGACGC
CACCTCTCCTTGGACTACAAAACTAACAGATATATGTATGATAGATGGCT
AGCACTGCAGAGATCTGCGAGCACCTCCTCCAGACTCCCCCACAGTCACA
GACCGCCATTGCCTACAACTACCTCGTCCCTAATGTGAGGGGTCTGGAGA
ACCTGATCAAAATCATGGATGCCACAGGTGTCCCGGCAGACACGACAGGA
TCTGCCACGAAAACCCCAACAACAACCGAGATTTCTCTGTTCGCAGCAGC
AACAGAGGCGTTCTCCAAGGCCAACACAAACTGCACAATCGAGGAGTCAC
TAGATCGCATCCGTCCAATCGTCTCGCTAGCAAAGACGAAGAACATCCGA
GTGAGGGGCTATGTTTCGGTTGCTCTGGGTTGTCCGTACGAGGGTCCGGA
TGTATCCCCATCCAAGGTGGCCGACATCACTGCAACGCTACTTGAAATGG
GAGCCGATGAGGTGTCGGTGGCTGATACCACGGGCATGGGCACGGCACCC
CGCACGATGAAGCTACTGCAGGCTCTGAAGGCGGCCGGGATTGCGAATAA
TGATCTGGCACTGCACTTCCATGATACTTATGGACAGGCTCTCGTCAATA
CTATCGTAGGGCTGGAGCATGGTATCCGCATCTTCGATAGCAGTGTTGGT
GGTCTTGGTGGTTGCCCTTACTCGAAGGGTGCAACGGGGAATGTCTCGAC
AGAGGACCTTGTACATACCATCCATGGTCTGGGCATGCACACTGGTATCA
ACCTGGAGGAAATGGCCAAGATTGGCTCCTGGATTAGTGGGGAGCTGGGC
CGGTTCAATGAGAGTCGTGCGGGCAAGGCCATACTGGCGCGGATGGAAGA
GTGA
back to top

Coding sequence (CDS) from alignment at MCQH01000027:582891..584044-

>ATCC10864_001492-T1 ID=ATCC10864_001492-T1|Name=ATCC10864_001492-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2130bp|location=Sequence derived from alignment at MCQH01000027:582891..584044- (Aspergillus niger ATCC 10864)
ATGGCTAGCACTGCAGAGATCTGCGAGCACCTCCTCCAGACTCCCCCACA
GTCACAGACCGCCATTGCCTACAACTACCTCGTCCCTAATGTGAGGGGTC
TGGAGAACCTGATCAAAATCATGGATGCCACAGGTGTCCCGGCAGACACG
ACAGGATCTGCCACGAAAACCCCAACAACAACCGAGATTTCTCTGTTCGC
AGCAGCAACAGAGGCGTTCTCCAAGGCCAACACAAACTGCACAATCGAGG
AGTCACTAGATCGCATCCGTCCAATCGTCTCGCTAGCAAAGACGAAGAAC
ATCCGAGTGAGGGGCTATGTTTCGGTTGCTCTGGGTTGTCCGTACGAGGG
TCCGGATGTATCCCCATCCAAGGTGGCCGACATCACTGCAACGCTACTTG
AAATGGGAGCCGATGAGGTGTCGGTGGCTGATACCACGGGCATGGGCACG
GCACCCCGCACGATGAAGCTACTGCAGGCTCTGAAGGCGGCCGGGATTGC
GAATAATGATCTGGCACTGCACTTCCATGATACTTATGGACAGGCTCTCG
TCAATACTATCGTAGGGCTGGAGCATGGTATCCGCATCTTCGATAGCAGT
GTTGGTGGTCTTGGTGGTTGCCCTTACTCGAAGGGTGCAACGGGGAATGT
CTCGACAGAGGACCTTGTACATACCATCCATGGTCTGGGCATGCACACTG
GTATCAACCTGGAGGAAATGGCCAAGATTGGCTCCTGGATTAGTGGGGAG
CTGGGCCGGTTCAATGAGAGTCGTGCGGGCAAGGCCATACTGGCGCGGAT
GGAAGAGTGAATGATGACCTTCCGACCTCGAATGAGCCTCTTCTCTGCCC
TTCGCACGGCCCCAGCTCGACGCCGCTTTGCGACTGAGGCGCGGTTAACC
ACGGACCATGTCCGCATCGTCGAAGTAGGGCCACGAGATGGTCTGCAGAA
CGAGAAAAAGTCGATTCCACTTGAGACCAAGCTTCAGCTTATTGAGAAGC
TTGCTAAGACAGGTGTAACCACAATTGAGGCGGGATCCTTTGTGCCGGCG
AAATGGGTGCCCCAGATGGCTAGCACTGCAGAGATCTGCGAGCACCTCCT
CCAGACTCCCCCACAGTCACAGACCGCCATTGCCTACAACTACCTCGTCC
CTAATGTGAGGGGTCTGGAGAACCTGATCAAAATCATGGATGCCACAGGT
GTCCCGGCAGACACGACAGGATCTGCCACGAAAACCCCAACAACAACCGA
GATTTCTCTGTTCGCAGCAGCAACAGAGGCGTTCTCCAAGGCCAACACAA
ACTGCACAATCGAGGAGTCACTAGATCGCATCCGTCCAATCGTCTCGCTA
GCAAAGACGAAGAACATCCGAGTGAGGGGCTATGTTTCGGTTGCTCTGGG
TTGTCCGTACGAGGGTCCGGATGTATCCCCATCCAAGGTGGCCGACATCA
CTGCAACGCTACTTGAAATGGGAGCCGATGAGGTGTCGGTGGCTGATACC
ACGGGCATGGGCACGGCACCCCGCACGATGAAGCTACTGCAGGCTCTGAA
GGCGGCCGGGATTGCGAATAATGATCTGGCACTGCACTTCCATGATACTT
ATGGACAGGCTCTCGTCAATACTATCGTAGGGCTGGAGCATGGTATCCGC
ATCTTCGATAGCAGTGTTGGTGGTCTTGGTGGTTGCCCTTACTCGAAGGG
TGCAACGGGGAATGTCTCGACAGAGGACCTTGTACATACCATCCATGGTC
TGGGCATGCACACTGGTATCAACCTGGAGGAAATGGCCAAGATTGGCTCC
TGGATTAGTGGGGAGCTGGGCCGGTTCAATGAGAGTCGTGCGGGCAAGGC
CATACTGGCGCGGATGGAAGAGTGAATGATGACCTTCCGACCTCGAATGA
GCCTCTTCTCTGCCCTTCGCACGGCCCCAGCTCGACGCCGCTTTGCGACT
GAGGCGCGGTTAACCACGGACCATGTCCGCATCGTCGAAGTAGGGCCACG
AGATGGTCTGCAGAACGAGAAAAAGTCGATTCCACTTGAGACCAAGCTTC
AGCTTATTGAGAAGCTTGCTAAGACAGGTGTAACCACAATTGAGGCGGGA
TCCTTTGTGCCGGCGAAATGGGTGCCCCAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0016833oxo-acid-lyase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATCC10864_001492ATCC10864_001492Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001492-T1ATCC10864_001492-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001492-T1.cdsATCC10864_001492-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001492-T1.exon2ATCC10864_001492-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_001492-T1.exon1ATCC10864_001492-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
PFAMPF00682
InterProIPR000891
InterProIPR043594
InterProIPR013785
Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000027supercontigMCQH01000027:582891..584044 -
Powered by Drupal