You are here

Home

ATCC10864_001501-T1, ATCC10864_001501-T1 (mRNA) Aspergillus niger ATCC 10864

Overview
NameATCC10864_001501-T1
Unique NameATCC10864_001501-T1
TypemRNA
OrganismAspergillus niger ATCC 10864
Sequences
The following sequences are available for this feature:

mRNA from alignment at MCQH01000027:606802..607834-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ATCC10864_001501-T1 ID=ATCC10864_001501-T1|Name=ATCC10864_001501-T1|organism=Aspergillus niger ATCC 10864|type=mRNA|length=1033bp|location=Sequence derived from alignment at MCQH01000027:606802..607834- (Aspergillus niger ATCC 10864)
ATGTTCTCCGTTCGTGTCGCCCGCGCCGGCCTCCGTGCCACCGCCCAGCA
GTTCTCCGTTCCTCGCACTGCCGCCGTCAACGGTCTGAGGACCTATGCCA
CCCCGGCCCAGGATGTCAAGCCTCCTGTCTCCCTGTTCGGTGTTGACGGC
ACCTATGCCACCGCTCTGGTATGCGACACCATGATTCTACCCGTTGGTTG
CTAGTAGTGGCTCTGAGGTTCCCTCCCAGTCAATGGCACGGAAGAAAGGA
AGAAAACAAGAAAGAGGGGGGAAAGGCGGACGGGAGACCTAAGAAAACAA
AAACAGAGATTCACACGTCCTAGCAACCTCATGATCCCAGAAATGGCCAA
CTTCAAGAAAGCTCCCTGGCTAACCGATTGTTTGCGTTTCTGCATATAGT
ACACTGCCTCTGCCAAGTCCGCCAACCTCGACCAGACCTCCAAGGCTCTC
GCCAGCCTCGGTCAGACCCTCAAGGCCGACCGCAAGCTGATCACCATCCT
CTCCGCCCCTACCCTCACTGTCGCCGACAAGCAGCAGATTGTCCAGGAGC
TGCAGAAGGTTGCTGGTGCCGACAAGGGCGACATCCTCAAGAACTTCCTC
AACACTCTGGCTGAGAACAACCGTCTCGGTCTCCTCGAGGGTATCTGCGA
GAAGTTCTCCACTCTCATGGGTGCTCACCGTGGTGAGATCGAGCTGAACA
TCACCAGTGCTCAGGTACTATCTTCTTTCGGGTTTTCGTATCGTGGGGCT
TTATACTGATTGTTGGGAAACAGGAGCTCGACACCAAGACTGTCAACCGT
CTCGAGAAGGCTGTTTCCAAGTCTGAGTTCAGCCAGGGCAAGAAGCTCAA
GGTTGTCACCAAGGTAATTACTAATTCTTTCCCCAATTGACGCTACGTAT
ACTCATATGTTCAAATCAGGTCGACCCCGAGCTCGTCGGTGGTCTGGTCG
TTGAGATCGGTGACCGCACCATTGACCTCAGCGTCTCCTCGAAGATTGCC
AAGCTCAACAAGGCCCTCACCGACGCTTTGTAA
back to top

Coding sequence (CDS) from alignment at MCQH01000027:606802..607834-

>ATCC10864_001501-T1 ID=ATCC10864_001501-T1|Name=ATCC10864_001501-T1|organism=Aspergillus niger ATCC 10864|type=CDS|length=2748bp|location=Sequence derived from alignment at MCQH01000027:606802..607834- (Aspergillus niger ATCC 10864)
GTCGACCCCGAGCTCGTCGGTGGTCTGGTCGTTGAGATCGGTGACCGCAC
CATTGACCTCAGCGTCTCCTCGAAGATTGCCAAGCTCAACAAGGCCCTCA
CCGACGCTTTGTAAGAGCTCGACACCAAGACTGTCAACCGTCTCGAGAAG
GCTGTTTCCAAGTCTGAGTTCAGCCAGGGCAAGAAGCTCAAGGTTGTCAC
CAAGTACACTGCCTCTGCCAAGTCCGCCAACCTCGACCAGACCTCCAAGG
CTCTCGCCAGCCTCGGTCAGACCCTCAAGGCCGACCGCAAGCTGATCACC
ATCCTCTCCGCCCCTACCCTCACTGTCGCCGACAAGCAGCAGATTGTCCA
GGAGCTGCAGAAGGTTGCTGGTGCCGACAAGGGCGACATCCTCAAGAACT
TCCTCAACACTCTGGCTGAGAACAACCGTCTCGGTCTCCTCGAGGGTATC
TGCGAGAAGTTCTCCACTCTCATGGGTGCTCACCGTGGTGAGATCGAGCT
GAACATCACCAGTGCTCAGATGTTCTCCGTTCGTGTCGCCCGCGCCGGCC
TCCGTGCCACCGCCCAGCAGTTCTCCGTTCCTCGCACTGCCGCCGTCAAC
GGTCTGAGGACCTATGCCACCCCGGCCCAGGATGTCAAGCCTCCTGTCTC
CCTGTTCGGTGTTGACGGCACCTATGCCACCGCTCTGGTCGACCCCGAGC
TCGTCGGTGGTCTGGTCGTTGAGATCGGTGACCGCACCATTGACCTCAGC
GTCTCCTCGAAGATTGCCAAGCTCAACAAGGCCCTCACCGACGCTTTGTA
AGAGCTCGACACCAAGACTGTCAACCGTCTCGAGAAGGCTGTTTCCAAGT
CTGAGTTCAGCCAGGGCAAGAAGCTCAAGGTTGTCACCAAGTACACTGCC
TCTGCCAAGTCCGCCAACCTCGACCAGACCTCCAAGGCTCTCGCCAGCCT
CGGTCAGACCCTCAAGGCCGACCGCAAGCTGATCACCATCCTCTCCGCCC
CTACCCTCACTGTCGCCGACAAGCAGCAGATTGTCCAGGAGCTGCAGAAG
GTTGCTGGTGCCGACAAGGGCGACATCCTCAAGAACTTCCTCAACACTCT
GGCTGAGAACAACCGTCTCGGTCTCCTCGAGGGTATCTGCGAGAAGTTCT
CCACTCTCATGGGTGCTCACCGTGGTGAGATCGAGCTGAACATCACCAGT
GCTCAGATGTTCTCCGTTCGTGTCGCCCGCGCCGGCCTCCGTGCCACCGC
CCAGCAGTTCTCCGTTCCTCGCACTGCCGCCGTCAACGGTCTGAGGACCT
ATGCCACCCCGGCCCAGGATGTCAAGCCTCCTGTCTCCCTGTTCGGTGTT
GACGGCACCTATGCCACCGCTCTGGTCGACCCCGAGCTCGTCGGTGGTCT
GGTCGTTGAGATCGGTGACCGCACCATTGACCTCAGCGTCTCCTCGAAGA
TTGCCAAGCTCAACAAGGCCCTCACCGACGCTTTGTAAGAGCTCGACACC
AAGACTGTCAACCGTCTCGAGAAGGCTGTTTCCAAGTCTGAGTTCAGCCA
GGGCAAGAAGCTCAAGGTTGTCACCAAGTACACTGCCTCTGCCAAGTCCG
CCAACCTCGACCAGACCTCCAAGGCTCTCGCCAGCCTCGGTCAGACCCTC
AAGGCCGACCGCAAGCTGATCACCATCCTCTCCGCCCCTACCCTCACTGT
CGCCGACAAGCAGCAGATTGTCCAGGAGCTGCAGAAGGTTGCTGGTGCCG
ACAAGGGCGACATCCTCAAGAACTTCCTCAACACTCTGGCTGAGAACAAC
CGTCTCGGTCTCCTCGAGGGTATCTGCGAGAAGTTCTCCACTCTCATGGG
TGCTCACCGTGGTGAGATCGAGCTGAACATCACCAGTGCTCAGATGTTCT
CCGTTCGTGTCGCCCGCGCCGGCCTCCGTGCCACCGCCCAGCAGTTCTCC
GTTCCTCGCACTGCCGCCGTCAACGGTCTGAGGACCTATGCCACCCCGGC
CCAGGATGTCAAGCCTCCTGTCTCCCTGTTCGGTGTTGACGGCACCTATG
CCACCGCTCTGGTCGACCCCGAGCTCGTCGGTGGTCTGGTCGTTGAGATC
GGTGACCGCACCATTGACCTCAGCGTCTCCTCGAAGATTGCCAAGCTCAA
CAAGGCCCTCACCGACGCTTTGTAAGAGCTCGACACCAAGACTGTCAACC
GTCTCGAGAAGGCTGTTTCCAAGTCTGAGTTCAGCCAGGGCAAGAAGCTC
AAGGTTGTCACCAAGTACACTGCCTCTGCCAAGTCCGCCAACCTCGACCA
GACCTCCAAGGCTCTCGCCAGCCTCGGTCAGACCCTCAAGGCCGACCGCA
AGCTGATCACCATCCTCTCCGCCCCTACCCTCACTGTCGCCGACAAGCAG
CAGATTGTCCAGGAGCTGCAGAAGGTTGCTGGTGCCGACAAGGGCGACAT
CCTCAAGAACTTCCTCAACACTCTGGCTGAGAACAACCGTCTCGGTCTCC
TCGAGGGTATCTGCGAGAAGTTCTCCACTCTCATGGGTGCTCACCGTGGT
GAGATCGAGCTGAACATCACCAGTGCTCAGATGTTCTCCGTTCGTGTCGC
CCGCGCCGGCCTCCGTGCCACCGCCCAGCAGTTCTCCGTTCCTCGCACTG
CCGCCGTCAACGGTCTGAGGACCTATGCCACCCCGGCCCAGGATGTCAAG
CCTCCTGTCTCCCTGTTCGGTGTTGACGGCACCTATGCCACCGCTCTG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0046933proton-transporting ATP synthase activity, rotational mechanism
Vocabulary: Biological Process
TermDefinition
GO:0015986ATP synthesis coupled proton transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATP5ATCC10864_001501Aspergillus niger ATCC 10864gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001501-T1ATCC10864_001501-T1-proteinAspergillus niger ATCC 10864polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001501-T1.cdsATCC10864_001501-T1.cdsAspergillus niger ATCC 10864CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ATCC10864_001501-T1.exon4ATCC10864_001501-T1.exon4Aspergillus niger ATCC 10864exon
ATCC10864_001501-T1.exon3ATCC10864_001501-T1.exon3Aspergillus niger ATCC 10864exon
ATCC10864_001501-T1.exon2ATCC10864_001501-T1.exon2Aspergillus niger ATCC 10864exon
ATCC10864_001501-T1.exon1ATCC10864_001501-T1.exon1Aspergillus niger ATCC 10864exon


Cross References
External references for this mRNA
DatabaseAccession
InterProIPR020781
InterProIPR000711
InterProIPR026015
PFAMPF00213
Properties
Property NameValue
NoteBUSCO:EOG09264KDO
ProductATP synthase F0 subcomplex subunit OSCP atp5
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 10864 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MCQH01000027supercontigMCQH01000027:606802..607834 -
Powered by Drupal